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Search of human proteins with 89242134
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89242134 hypothetical protein LOC129450 [Homo sapiens]
(315 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89242134 hypothetical protein LOC129450 [Homo sapiens] 642 0.0
gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens] 101 8e-22
gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens] 101 8e-22
gi|21314714 Hspb associated protein 1 [Homo sapiens] 76 4e-14
gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor... 74 2e-13
gi|167860114 jumonji domain containing 7 [Homo sapiens] 63 3e-10
gi|56090146 jumonji domain containing 8 [Homo sapiens] 37 0.017
gi|90093355 jumonji C domain containing histone demethylase 1 ho... 35 0.11
gi|239788849 jumonji domain containing 4 isoform 2 [Homo sapiens] 32 0.73
gi|239788847 jumonji domain containing 4 isoform 1 [Homo sapiens] 32 0.73
gi|32698700 PHD finger protein 8 [Homo sapiens] 31 1.3
gi|23199995 Williams Beuren syndrome chromosome region 22 protei... 30 2.8
gi|106879206 chromosome 14 open reading frame 169 [Homo sapiens] 30 3.6
gi|157694489 immunoglobulin superfamily, member 2 [Homo sapiens] 29 4.8
gi|32484975 adenosine kinase isoform b [Homo sapiens] 29 4.8
gi|32484973 adenosine kinase isoform a [Homo sapiens] 29 4.8
gi|117190342 PHD finger protein 2 [Homo sapiens] 29 6.2
gi|154275767 ADAMTS-like 1 isoform 4 precursor [Homo sapiens] 29 6.2
gi|23346418 MYC induced nuclear antigen isoform b [Homo sapiens] 28 8.1
gi|110227621 MYC induced nuclear antigen isoform a [Homo sapiens] 28 8.1
gi|110227619 MYC induced nuclear antigen isoform a [Homo sapiens] 28 8.1
gi|55956916 myosin IE [Homo sapiens] 28 8.1
>gi|89242134 hypothetical protein LOC129450 [Homo sapiens]
Length = 315
Score = 642 bits (1656), Expect = 0.0
Identities = 315/315 (100%), Positives = 315/315 (100%)
Query: 1 MAGQHLPVPRLEGVSREQFMQHLYPQRKPLVLEGIDLGPCTSKWTVDYLSQVGGKKEVKI 60
MAGQHLPVPRLEGVSREQFMQHLYPQRKPLVLEGIDLGPCTSKWTVDYLSQVGGKKEVKI
Sbjct: 1 MAGQHLPVPRLEGVSREQFMQHLYPQRKPLVLEGIDLGPCTSKWTVDYLSQVGGKKEVKI 60
Query: 61 HVAAVAQMDFISKNFVYRTLPFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVAD 120
HVAAVAQMDFISKNFVYRTLPFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVAD
Sbjct: 61 HVAAVAQMDFISKNFVYRTLPFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVAD 120
Query: 121 IRKQFPLLKGDIKFPEFFKEEQFFSSVFRISSPGLQLWTHYDVMDNLLIQVTGKKRVVLF 180
IRKQFPLLKGDIKFPEFFKEEQFFSSVFRISSPGLQLWTHYDVMDNLLIQVTGKKRVVLF
Sbjct: 121 IRKQFPLLKGDIKFPEFFKEEQFFSSVFRISSPGLQLWTHYDVMDNLLIQVTGKKRVVLF 180
Query: 181 SPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPALWFHNVISE 240
SPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPALWFHNVISE
Sbjct: 181 SPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPALWFHNVISE 240
Query: 241 EFGVGVNIFWKHLPSECYDKTDTYGNKDPTAASRAAQILDRALKTLAELPEEYRDFYARR 300
EFGVGVNIFWKHLPSECYDKTDTYGNKDPTAASRAAQILDRALKTLAELPEEYRDFYARR
Sbjct: 241 EFGVGVNIFWKHLPSECYDKTDTYGNKDPTAASRAAQILDRALKTLAELPEEYRDFYARR 300
Query: 301 MVLHIQDKAYSKNSE 315
MVLHIQDKAYSKNSE
Sbjct: 301 MVLHIQDKAYSKNSE 315
>gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens]
Length = 454
Score = 101 bits (252), Expect = 8e-22
Identities = 69/257 (26%), Positives = 123/257 (47%), Gaps = 39/257 (15%)
Query: 8 VPRLEGVSREQFMQHLYPQRKPLVLEGI-DLGPCTSKWTVDYLSQVGGKKEVKIHVAAVA 66
VPRL S + F + +P++L+G+ D PC KW+++Y+ ++ G + V + V +
Sbjct: 222 VPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGS-- 279
Query: 67 QMDFISKNFVYRTLPFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRK--- 123
R +E+ + ++ +E + + + +PR DV + +
Sbjct: 280 ---------------------RYTDEEWSQTLMTVNE-FISKYIVNEPR-DVGYLAQHQL 316
Query: 124 --QFPLLKGDIKFPEFFK----EEQFFSSVFRISSPGLQLWTHYDVMDNLLIQVTGKKRV 177
Q P LK DI P++ EE+ + G H D N L+QV G+K +
Sbjct: 317 FDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYI 376
Query: 178 VLFSPRDAQYLYLKGT----KSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPALW 233
L+SP+++ LY T + ++++NPDL K+P F+KA C L G++LFIP +
Sbjct: 377 RLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKY 436
Query: 234 FHNVISEEFGVGVNIFW 250
+H V + + V+ +W
Sbjct: 437 WHYVRALDLSFSVSFWW 453
>gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens]
Length = 416
Score = 101 bits (252), Expect = 8e-22
Identities = 69/257 (26%), Positives = 123/257 (47%), Gaps = 39/257 (15%)
Query: 8 VPRLEGVSREQFMQHLYPQRKPLVLEGI-DLGPCTSKWTVDYLSQVGGKKEVKIHVAAVA 66
VPRL S + F + +P++L+G+ D PC KW+++Y+ ++ G + V + V +
Sbjct: 184 VPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGS-- 241
Query: 67 QMDFISKNFVYRTLPFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRK--- 123
R +E+ + ++ +E + + + +PR DV + +
Sbjct: 242 ---------------------RYTDEEWSQTLMTVNE-FISKYIVNEPR-DVGYLAQHQL 278
Query: 124 --QFPLLKGDIKFPEFFK----EEQFFSSVFRISSPGLQLWTHYDVMDNLLIQVTGKKRV 177
Q P LK DI P++ EE+ + G H D N L+QV G+K +
Sbjct: 279 FDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYI 338
Query: 178 VLFSPRDAQYLYLKGT----KSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPALW 233
L+SP+++ LY T + ++++NPDL K+P F+KA C L G++LFIP +
Sbjct: 339 RLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKY 398
Query: 234 FHNVISEEFGVGVNIFW 250
+H V + + V+ +W
Sbjct: 399 WHYVRALDLSFSVSFWW 415
>gi|21314714 Hspb associated protein 1 [Homo sapiens]
Length = 488
Score = 75.9 bits (185), Expect = 4e-14
Identities = 70/216 (32%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 44 WTVDYLSQVGGKKEVKIHV-----AAVAQMDFISKNFVYRTLP------FDQ--LVQRAA 90
W YLSQV K+++ + + V Q + + N+V TL DQ +
Sbjct: 58 WNAKYLSQVLHGKQIRFRMGMKSMSTVPQFE-TTCNYVEATLEEFLTWNCDQSSISGPFR 116
Query: 91 EEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIKFPEFFKEEQFFSSVFRI 150
+ H +F+ D KY++ SL ED D++ D FP +E S I
Sbjct: 117 DYDHSKFWAYADYKYFV-SLFEDKTDLFQDVKWS------DFGFPGRNGQE----STLWI 165
Query: 151 SSPGLQLWTHYDVMD-NLLIQVTGKKRVVLFSPRDAQYLY---LKGTKSEV---LNIDNP 203
S G H D NL+ QV G+KR LF P D +LY + +S V +N+ NP
Sbjct: 166 GSLGAHTPCHLDSYGCNLVFQVQGRKRWHLFPPEDTPFLYPTRIPYEESSVFSKINVVNP 225
Query: 204 DLAKYPLFSKARRYECSLEAGDVLFIPALWFHNVIS 239
DL ++P F KA+R+ +L G VLF+P W+H V S
Sbjct: 226 DLKRFPQFRKAQRHAVTLSPGQVLFVPRHWWHYVES 261
>gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor
[Homo sapiens]
Length = 349
Score = 73.6 bits (179), Expect = 2e-13
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 41/276 (14%)
Query: 7 PVPRLEGVSREQFMQHLYPQRKPLVLEGIDLGPCTSKWTVDYLSQVGGKKEVKIHVAAVA 66
P+PRL + + L +P+VL +L KW ++YL + G + ++ A+
Sbjct: 41 PIPRLS--QSDPRAEELIENEEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTH 98
Query: 67 QMDFISK-------NFVYRT----LPFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDP- 114
+ + + NF R+ + F + V++ + + + +E+ YL+ D
Sbjct: 99 KFLYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQR----GGEERLYLQQTLNDTV 154
Query: 115 -RKDVADIRKQFPLLKGDIKFPEFFKEE------QFFSSVFRISSPGLQLWTHYDVMDNL 167
RK V D + K++ Q S++ I G HYD N
Sbjct: 155 GRKIVMDFL--------GFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAHYDEQQNF 206
Query: 168 LIQVTGKKRVVLFSPRDAQYLYLKGT-----KSEVLNIDNPDLAKYPLFSKARRYECSLE 222
Q+ G KR +LF P + LY + ++ DNPD ++P F YE +
Sbjct: 207 FAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVG 266
Query: 223 AGDVLFIPALWFHNVISEEFG---VGVNIFWKHLPS 255
GDVL+IP W+H++ S G + VN ++K P+
Sbjct: 267 PGDVLYIPMYWWHHIESLLNGGITITVNFWYKGAPT 302
>gi|167860114 jumonji domain containing 7 [Homo sapiens]
Length = 316
Score = 63.2 bits (152), Expect = 3e-10
Identities = 60/261 (22%), Positives = 97/261 (37%), Gaps = 52/261 (19%)
Query: 25 PQRKPLVLEGIDLGPCTSKWTVDYLSQVGGKKEVKIHVAAVAQMDFISKNFVYRTLPFDQ 84
P R ++ + P KW++ Y G EV + V D + D+
Sbjct: 48 PNRPCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRG---------DR 98
Query: 85 LVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIK--FPEFFKEEQ 142
+ A F + E G V ++KQ L ++ P+
Sbjct: 99 FMMPAERRLPLSFVLDVLE-------GRAQHPGVLYVQKQCSNLPSELPQLLPDLESHVP 151
Query: 143 FFSSVFRISSPGLQLWT---------HYDVMDNLLIQVTGKKRVVLFSPRDAQY----LY 189
+ S + W H D +NL V+G+K + P D + LY
Sbjct: 152 WASEALGKMPDAVNFWLGEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSDRPFIPYELY 211
Query: 190 LKGT------------------KSEVLNIDN--PDLAKYPLFSKARRYECSLEAGDVLFI 229
T K + +D PDLA+YP +S+A+ C++ AG++L++
Sbjct: 212 TPATYQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCTVRAGEMLYL 271
Query: 230 PALWFHNVISEEFGVGVNIFW 250
PALWFH+V + + VN FW
Sbjct: 272 PALWFHHVQQSQGCIAVN-FW 291
>gi|56090146 jumonji domain containing 8 [Homo sapiens]
Length = 285
Score = 37.4 bits (85), Expect = 0.017
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 171 VTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIP 230
+ G+KR L+ P + T L P L AR EC++ AG+VL+ P
Sbjct: 210 IYGRKRWFLYPPEKTPEFHPNKTTLAWLRDTYPALPP-----SARPLECTIRAGEVLYFP 264
Query: 231 ALWFHNVISEEFGVGVNIF 249
W+H ++ + V ++ F
Sbjct: 265 DRWWHATLNLDTSVFISTF 283
>gi|90093355 jumonji C domain containing histone demethylase 1
homolog D [Homo sapiens]
Length = 941
Score = 34.7 bits (78), Expect = 0.11
Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 34/140 (24%)
Query: 117 DVADIRKQFPLLKG----DIKFPEFFKEEQFFSSV------FRISSPGLQLWTHYDVMDN 166
+V DI K+ ++ D FP+ F ++ V F I G +W H
Sbjct: 240 EVPDIAKKLSWVENYWPDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHV----- 294
Query: 167 LLIQVTGKKRVVLFSPRDAQYLYLKG-----TKSEVLNIDNPDLAKYPLFSKARRYECSL 221
+ G+K L P D + T+SEV D D + Y+C +
Sbjct: 295 ----LWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVD----------KCYKCVV 340
Query: 222 EAGDVLFIPALWFHNVISEE 241
+ G LF+P W H V++ +
Sbjct: 341 KQGHTLFVPTGWIHAVLTSQ 360
>gi|239788849 jumonji domain containing 4 isoform 2 [Homo sapiens]
Length = 447
Score = 32.0 bits (71), Expect = 0.73
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 169 IQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARR----YECSLEAG 224
+ V G+K+ +LF P + L + ++ +P L L + + E + EAG
Sbjct: 246 VNVCGRKKWLLFPPGQEEALRDRHGNLPY-DVTSPALCDTHLHPRNQLAGPPLEITQEAG 304
Query: 225 DVLFIPALWFHNVISEEFGVGVNIFW 250
+++F+P+ W H V + + + +N W
Sbjct: 305 EMVFVPSGWHHQVHNLDDTISINHNW 330
>gi|239788847 jumonji domain containing 4 isoform 1 [Homo sapiens]
Length = 463
Score = 32.0 bits (71), Expect = 0.73
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 169 IQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARR----YECSLEAG 224
+ V G+K+ +LF P + L + ++ +P L L + + E + EAG
Sbjct: 246 VNVCGRKKWLLFPPGQEEALRDRHGNLPY-DVTSPALCDTHLHPRNQLAGPPLEITQEAG 304
Query: 225 DVLFIPALWFHNVISEEFGVGVNIFW 250
+++F+P+ W H V + + + +N W
Sbjct: 305 EMVFVPSGWHHQVHNLDDTISINHNW 330
>gi|32698700 PHD finger protein 8 [Homo sapiens]
Length = 1024
Score = 31.2 bits (69), Expect = 1.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 217 YECSLEAGDVLFIPALWFHNVIS 239
Y+CS++ G LFIP W H V++
Sbjct: 301 YKCSVKQGQTLFIPTGWIHAVLT 323
>gi|23199995 Williams Beuren syndrome chromosome region 22 protein
[Homo sapiens]
Length = 281
Score = 30.0 bits (66), Expect = 2.8
Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 152 SPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLF 211
+P +L+ + + ++L++ G + V+ P +++ L L T++ + YP
Sbjct: 137 NPAKRLYCFFASLFSVLVR--GSRAVLQLYPENSEQLELITTQATKAGFSGGMVVDYPNS 194
Query: 212 SKARRYECSLEAGDVLFIP 230
+KA+++ L +G FIP
Sbjct: 195 AKAKKFYLCLFSGPSTFIP 213
>gi|106879206 chromosome 14 open reading frame 169 [Homo sapiens]
Length = 641
Score = 29.6 bits (65), Expect = 3.6
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 19/139 (13%)
Query: 160 HYDVMDNLLIQVTGKKRVVLFSPR-DAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYE 218
HYD ++ ++Q+ G+K ++ PR + L L + N DL + L +
Sbjct: 340 HYDDIEAFVLQLEGRKLWRVYRPRVPTEELALTSSP----NFSQDDLGEPVL-------Q 388
Query: 219 CSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHLPSECYDKTDTYGNKDPTAASRAAQ- 277
LE GD+L+ P + H ++ GV+ HL Y + +T+G+ A Q
Sbjct: 389 TVLEPGDLLYFPRGFIHQAECQD---GVHSL--HLTLSTYQR-NTWGDFLEAILPLAVQA 442
Query: 278 ILDRALKTLAELPEEYRDF 296
++ ++ LP ++ D+
Sbjct: 443 AMEENVEFRRGLPRDFMDY 461
>gi|157694489 immunoglobulin superfamily, member 2 [Homo sapiens]
Length = 1021
Score = 29.3 bits (64), Expect = 4.8
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 14/100 (14%)
Query: 216 RYECSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHLPSECYDKTDTYGNKDPTAASRA 275
R++ + LF L H+ EE GV E YD+ Y N+ P A++
Sbjct: 609 RFQKKTKVSQSLFRSQLLVHDATEEETGV------YQCEVEVYDRNSLYNNRPPRASA-- 660
Query: 276 AQILDRALKTLAELPEEYRDFYARRMVLHIQDKAYSKNSE 315
+ L+ LPE +R V Q+ + + N++
Sbjct: 661 ---ISHPLRIAVTLPESKLKVNSRSQV---QELSINSNTD 694
>gi|32484975 adenosine kinase isoform b [Homo sapiens]
Length = 362
Score = 29.3 bits (64), Expect = 4.8
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 6/39 (15%)
Query: 60 IHVAAVAQMDFISKNFVYRTLPFDQLVQRAAEEKHKEFF 98
+ ++AV DF+ K Y P DQ++ AE+KHKE F
Sbjct: 34 LDISAVVDKDFLDK---YSLKPNDQIL---AEDKHKELF 66
>gi|32484973 adenosine kinase isoform a [Homo sapiens]
Length = 345
Score = 29.3 bits (64), Expect = 4.8
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 6/39 (15%)
Query: 60 IHVAAVAQMDFISKNFVYRTLPFDQLVQRAAEEKHKEFF 98
+ ++AV DF+ K Y P DQ++ AE+KHKE F
Sbjct: 17 LDISAVVDKDFLDK---YSLKPNDQIL---AEDKHKELF 49
>gi|117190342 PHD finger protein 2 [Homo sapiens]
Length = 1096
Score = 28.9 bits (63), Expect = 6.2
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 24/97 (24%)
Query: 148 FRISSPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQY-LYLK----GTKSEVLNIDN 202
F I S G W H + G+K L P A LY + SE+ D
Sbjct: 248 FHIDSGGASAWYHV---------LKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQ 298
Query: 203 PDLAKYPLFSKARRYECSLEAGDVLFIPALWFHNVIS 239
D + Y+C ++ G LFIP+ W + ++
Sbjct: 299 VD----------KCYKCIVKQGQTLFIPSGWIYATLT 325
>gi|154275767 ADAMTS-like 1 isoform 4 precursor [Homo sapiens]
Length = 1762
Score = 28.9 bits (63), Expect = 6.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 279 LDRALKTLAELPEEYRDFYARRMVLHIQDKAYSKNSE 315
LD L L++ PEE RD Y++ +V + + + + E
Sbjct: 1078 LDDILGNLSQQPEELRDLYSKHLVAQLAQEIFRSHLE 1114
>gi|23346418 MYC induced nuclear antigen isoform b [Homo sapiens]
Length = 464
Score = 28.5 bits (62), Expect = 8.1
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 110 LGEDPRKDVADIRKQFPLLKGDIKF--PEFFKEEQ---------FFSSVFR----ISSPG 154
L +D + +RK F + I+F P+ FK+E +F S+ I+ G
Sbjct: 113 LNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAG 172
Query: 155 LQ-LWTHYDVMDNLLIQVTGKKRVVLFSP 182
Q L HYD ++ ++Q+ G+K L+ P
Sbjct: 173 SQGLPPHYDDVEVFILQLEGEKHWRLYHP 201
>gi|110227621 MYC induced nuclear antigen isoform a [Homo sapiens]
Length = 465
Score = 28.5 bits (62), Expect = 8.1
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 110 LGEDPRKDVADIRKQFPLLKGDIKF--PEFFKEEQ---------FFSSVFR----ISSPG 154
L +D + +RK F + I+F P+ FK+E +F S+ I+ G
Sbjct: 113 LNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAG 172
Query: 155 LQ-LWTHYDVMDNLLIQVTGKKRVVLFSP 182
Q L HYD ++ ++Q+ G+K L+ P
Sbjct: 173 SQGLPPHYDDVEVFILQLEGEKHWRLYHP 201
>gi|110227619 MYC induced nuclear antigen isoform a [Homo sapiens]
Length = 465
Score = 28.5 bits (62), Expect = 8.1
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 110 LGEDPRKDVADIRKQFPLLKGDIKF--PEFFKEEQ---------FFSSVFR----ISSPG 154
L +D + +RK F + I+F P+ FK+E +F S+ I+ G
Sbjct: 113 LNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAG 172
Query: 155 LQ-LWTHYDVMDNLLIQVTGKKRVVLFSP 182
Q L HYD ++ ++Q+ G+K L+ P
Sbjct: 173 SQGLPPHYDDVEVFILQLEGEKHWRLYHP 201
>gi|55956916 myosin IE [Homo sapiens]
Length = 1108
Score = 28.5 bits (62), Expect = 8.1
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 82 FDQLVQRA-AEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIKFPEFFKE 140
F QL++ A AE+KH S D YYL SL + D D R++F + F E
Sbjct: 212 FYQLIEGASAEQKHSLGITSMDYYYYL-SLSGSYKVDDIDDRREFQETLHAMNVIGIFAE 270
Query: 141 EQ 142
EQ
Sbjct: 271 EQ 272
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,981,018
Number of Sequences: 37866
Number of extensions: 524051
Number of successful extensions: 1072
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1046
Number of HSP's gapped (non-prelim): 24
length of query: 315
length of database: 18,247,518
effective HSP length: 102
effective length of query: 213
effective length of database: 14,385,186
effective search space: 3064044618
effective search space used: 3064044618
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.