Guide to the Human Genome
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Name: WBSCR22 Sequence: fasta or formatted (281aa) NCBI GI: 23199995
Description:

Williams Beuren syndrome chromosome region 22 protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         16           1
 C cysteine            2.1          6           1
 D aspartate           4.6         13           1
 E glutamate           8.2         23           1
 F phenylalanine       4.6         13           2
 G glycine             8.9         25           2
 H histidine           1.1          3           1
 I isoleucine          3.6         10           1
 K lysine              5.3         15           2
 L leucine             9.6         27           3
 M methionine          2.8          8           1
 N asparagine          3.2          9           1
 P proline             6.0         17           2
 Q glutamine           3.2          9           1
 R arginine            9.6         27           2
 S serine              7.5         21           1
 T threonine           3.9         11           2
 V valine              5.0         14           2
 W tryptophan          1.1          3           1
 Y tyrosine            3.9         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Williams Beuren syndrome chromosome region 22 protei... 
WBSCR27               0.031   Williams-Beuren syndrome chromosome region 27 
C20orf7               0.031   hypothetical protein LOC79133 isoform 1 
ALKBH8                0.020   alkB, alkylation repair homolog 8 
LOC100294460          0.016   PREDICTED: similar to ATPase, Ca++ transporting, fa...
ATP2A1                0.016   ATPase, Ca++ transporting, fast twitch 1 isoform b [...
ATP2A1                0.016   ATPase, Ca++ transporting, fast twitch 1 isoform a [...
C8orf79               0.016   hypothetical protein LOC57604 isoform 1 
GNMT                  0.015   glycine N-methyltransferase 
SECISBP2L             0.015   SECIS binding protein 2-like 
ATP2A3                0.013   ATPase, Ca++ transporting, ubiquitous isoform a [Hom...
ATP2A3                0.013   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.013   ATPase, Ca++ transporting, ubiquitous isoform f [Hom...
ATP2A3                0.013   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.013   ATPase, Ca++ transporting, ubiquitous isoform b [Hom...
ATP2A3                0.013   ATPase, Ca++ transporting, ubiquitous isoform d [Hom...
ATP2A3                0.013   ATPase, Ca++ transporting, ubiquitous isoform e [Hom...
C2orf60               0.009   hypothetical protein LOC129450 
RCN3                  0.009   reticulocalbin 3, EF-hand calcium binding domain [Ho...
LOC100291814          0.007   PREDICTED: similar to Rhox homeobox family, member ...
RHOXF1                0.007   Rhox homeobox family, member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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