Guide to the Human Genome
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Name: CMAS Sequence: fasta or formatted (434aa) NCBI GI: 8923900
Description:

cytidine monophospho-N-acetylneuraminic acid synthetase

Referenced in:

N-Acetyl Sugars and Hyaluronan

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         30           2
 C cysteine            2.8         12           1
 D aspartate           5.5         24           1
 E glutamate           7.8         34           2
 F phenylalanine       2.1          9           1
 G glycine             8.5         37           2
 H histidine           2.5         11           1
 I isoleucine          6.2         27           2
 K lysine              7.4         32           2
 L leucine             8.3         36           2
 M methionine          1.8          8           1
 N asparagine          3.7         16           2
 P proline             3.5         15           2
 Q glutamine           3.7         16           1
 R arginine            6.7         29           2
 S serine              8.1         35           2
 T threonine           2.1          9           1
 V valine              7.8         34           2
 W tryptophan          1.6          7           1
 Y tyrosine            3.0         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytidine monophospho-N-acetylneuraminic acid syntheta... 
MTRR                  0.008   methionine synthase reductase isoform 1 
MTRR                  0.008   methionine synthase reductase isoform 2 
LRDD                  0.008   leucine rich repeat and death domain containing prot...
SARDH                 0.007   sarcosine dehydrogenase precursor 
SARDH                 0.007   sarcosine dehydrogenase precursor 
SGK493                0.007   protein kinase-like protein SgK493 
SRCAP                 0.007   Snf2-related CBP activator protein 
CCIN                  0.007   calicin 
LOC284889             0.006   PREDICTED: hypothetical protein 
LOC284889             0.006   PREDICTED: hypothetical protein 
LOC284889             0.006   PREDICTED: hypothetical protein 
C5orf33               0.006   hypothetical protein LOC133686 isoform 1 
POLG                  0.006   DNA-directed DNA polymerase gamma 
POLG                  0.006   DNA-directed DNA polymerase gamma 
LOC100293129          0.006   PREDICTED: hypothetical protein 
SMC1A                 0.006   structural maintenance of chromosomes 1A 
LRDD                  0.006   leucine rich repeat and death domain containing prot...
LRDD                  0.006   leucine rich repeat and death domain containing prot...
PTPN21                0.005   protein tyrosine phosphatase, non-receptor type 21 ...
SEPT5                 0.005   septin 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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