Search of human proteins with 8923417

Search of human proteins with 8923417

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8923417 ADP-ribosylhydrolase like 2 [Homo sapiens]
         (363 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8923417 ADP-ribosylhydrolase like 2 [Homo sapiens]                 716   0.0  
gi|40316946 ADP-ribosylhydrolase like 1 isoform 2 [Homo sapiens]       50   3e-06
gi|21702735 ADP-ribosylhydrolase like 1 isoform 1 [Homo sapiens]       50   3e-06
gi|5032013 kinesin family member 20A [Homo sapiens]                    33   0.40 
gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]         32   0.89 
gi|4557263 ADP-ribosylarginine hydrolase [Homo sapiens]                32   0.89 
gi|157311604 phosphodiesterase 4D interacting protein isoform 1 ...    30   2.6  
gi|7705555 iroquois homeobox 4 [Homo sapiens]                          30   3.4  
gi|145587088 hypothetical protein LOC165186 [Homo sapiens]             30   3.4  
gi|239757214 PREDICTED: hypothetical protein [Homo sapiens]            30   4.4  
gi|169214271 PREDICTED: hypothetical protein [Homo sapiens]            30   4.4  
gi|169213616 PREDICTED: hypothetical protein [Homo sapiens]            30   4.4  
gi|41152076 steroid-sensitive protein 1 [Homo sapiens]                 30   4.4  
gi|41152074 steroid-sensitive protein 1 [Homo sapiens]                 30   4.4  
gi|21362050 coiled-coil domain containing 115 [Homo sapiens]           30   4.4  
gi|187828564 BEN domain containing 5 [Homo sapiens]                    30   4.4  
gi|227499621 solute carrier family 27 (fatty acid transporter), ...    29   5.8  
gi|227499619 solute carrier family 27 (fatty acid transporter), ...    29   5.8  
gi|46488923 astrotactin isoform 1 [Homo sapiens]                       29   7.5  
gi|46488921 astrotactin isoform 2 [Homo sapiens]                       29   7.5  
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap...    29   7.5  
gi|32967278 ubiquitin-conjugating enzyme E2A isoform 3 [Homo sap...    29   7.5  
gi|32967276 ubiquitin-conjugating enzyme E2A isoform 2 [Homo sap...    29   7.5  
gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]             29   7.5  
gi|21735598 programmed cell death 4 isoform 2 [Homo sapiens]           28   9.8  
gi|21735596 programmed cell death 4 isoform 1 [Homo sapiens]           28   9.8  
gi|27894373 nuclear DNA-binding protein [Homo sapiens]                 28   9.8  
gi|5453583 nuclear DNA-binding protein [Homo sapiens]                  28   9.8  
gi|21389507 THAP domain containing 6 [Homo sapiens]                    28   9.8  

>gi|8923417 ADP-ribosylhydrolase like 2 [Homo sapiens]
          Length = 363

 Score =  716 bits (1847), Expect = 0.0
 Identities = 363/363 (100%), Positives = 363/363 (100%)

Query: 1   MAAAAMAAAAGGGAGAARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEP 60
           MAAAAMAAAAGGGAGAARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEP
Sbjct: 1   MAAAAMAAAAGGGAGAARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEP 60

Query: 61  DPGTPGSERTEALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGV 120
           DPGTPGSERTEALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGV
Sbjct: 61  DPGTPGSERTEALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGV 120

Query: 121 VTVFKKLLNPKCRDVFEPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQL 180
           VTVFKKLLNPKCRDVFEPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQL
Sbjct: 121 VTVFKKLLNPKCRDVFEPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQL 180

Query: 181 THASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEER 240
           THASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEER
Sbjct: 181 THASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEER 240

Query: 241 PYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNS 300
           PYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNS
Sbjct: 241 PYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNS 300

Query: 301 LQRTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLHRVF 360
           LQRTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLHRVF
Sbjct: 301 LQRTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLHRVF 360

Query: 361 QKS 363
           QKS
Sbjct: 361 QKS 363


>gi|40316946 ADP-ribosylhydrolase like 1 isoform 2 [Homo sapiens]
          Length = 272

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 56/237 (23%), Positives = 91/237 (38%), Gaps = 30/237 (12%)

Query: 143 FNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQ---LTHASSLGYNGAILQALAVH 199
           FN KGS G G A +   I L Y   + ++    +S +   +TH    G+ G++  AL V 
Sbjct: 41  FNEKGS-GFGAATKAMCIGLRYWKPERLETLIEVSVECGRMTHNHPTGFLGSLCTALFVS 99

Query: 200 LALQGESS-------------SEHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYSSRL 246
            A QG+               +E + ++ + H  + +          +  +EER  S   
Sbjct: 100 FAAQGKPLVQWGRDMLRAVPLAEEYCRKTIRHTAEYQEHWFYFEAKWQFYLEERKISKDS 159

Query: 247 KKIGELLDQASVTREEVV----SELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQ 302
           +      D       E      S  G G       P   Y  L          +A NS  
Sbjct: 160 ENKAIFPDNYDAEEREKTYRKWSSEGRGGRRGHDAPMIAYDALL---------AAGNSWT 210

Query: 303 RTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLHRV 359
                ++  GG++    T+AG + G  YG+D VP+   Q  E  E+ + L  +L+R+
Sbjct: 211 ELCHRAMFHGGESAATGTIAGCLFGLLYGLDLVPKGLYQDLEDKEKLEDLGAALYRL 267


>gi|21702735 ADP-ribosylhydrolase like 1 isoform 1 [Homo sapiens]
          Length = 354

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 56/237 (23%), Positives = 91/237 (38%), Gaps = 30/237 (12%)

Query: 143 FNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQ---LTHASSLGYNGAILQALAVH 199
           FN KGS G G A +   I L Y   + ++    +S +   +TH    G+ G++  AL V 
Sbjct: 123 FNEKGS-GFGAATKAMCIGLRYWKPERLETLIEVSVECGRMTHNHPTGFLGSLCTALFVS 181

Query: 200 LALQGESS-------------SEHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYSSRL 246
            A QG+               +E + ++ + H  + +          +  +EER  S   
Sbjct: 182 FAAQGKPLVQWGRDMLRAVPLAEEYCRKTIRHTAEYQEHWFYFEAKWQFYLEERKISKDS 241

Query: 247 KKIGELLDQASVTREEVV----SELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQ 302
           +      D       E      S  G G       P   Y  L          +A NS  
Sbjct: 242 ENKAIFPDNYDAEEREKTYRKWSSEGRGGRRGHDAPMIAYDALL---------AAGNSWT 292

Query: 303 RTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLHRV 359
                ++  GG++    T+AG + G  YG+D VP+   Q  E  E+ + L  +L+R+
Sbjct: 293 ELCHRAMFHGGESAATGTIAGCLFGLLYGLDLVPKGLYQDLEDKEKLEDLGAALYRL 349


>gi|5032013 kinesin family member 20A [Homo sapiens]
          Length = 890

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%)

Query: 164 YSSVQDVQKFARLSAQLTHASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLE 223
           Y     V KF+ +++QL HA  +      L +     +LQ   S E   K   G  +D+E
Sbjct: 491 YDETLHVAKFSAIASQLVHAPPMQLGFPSLHSFIKEHSLQVSPSLEKGAKADTGLDDDIE 550

Query: 224 GDAQSVLDARE--LGMEERPYSSRLKKIGELLDQASVTREEVVSEL 267
            +A   +  +E  L + E   +  LK+  E L      R+E+ +E+
Sbjct: 551 NEADISMYGKEELLQVVEAMKTLLLKERQEKLQLEMHLRDEICNEM 596


>gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]
          Length = 2481

 Score = 32.0 bits (71), Expect = 0.89
 Identities = 55/240 (22%), Positives = 88/240 (36%), Gaps = 28/240 (11%)

Query: 74  YYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKLLNPKCR 133
           +Y     +A  +    L   A+  +  A+R  Q+Y  D   GY    + V+++L      
Sbjct: 736 FYEQQLGLAHQVKDRRLEASAYAALGTAYRMIQKY--DKALGYHTQELEVYQEL-----S 788

Query: 134 DVFEPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFA-RLSAQLTHASSLGYNGAI 192
           D+    RA  +    Y     M +   ++A+   ++      +L      A   G  G  
Sbjct: 789 DLPGECRAHGHLAAVY-----MALGKYTMAFKCYEEQLDLGQKLKDPSLEAQVYGNMGIT 843

Query: 193 LQALAVHLALQGESSSE-HFLKQLLGHMEDLE--------GDAQSVL-DARELGMEERPY 242
              + V     G    +   L+QL G+   L+        GD    L D  E       Y
Sbjct: 844 KMNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKYYEQY 903

Query: 243 SSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQ 302
            S  + +  + DQA   R      LGNG  A  S+  A+ CF + +    E+  AFN  Q
Sbjct: 904 LSVAQSLNRMQDQAKAYRG-----LGNGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQ 958


>gi|4557263 ADP-ribosylarginine hydrolase [Homo sapiens]
          Length = 357

 Score = 32.0 bits (71), Expect = 0.89
 Identities = 71/319 (22%), Positives = 120/319 (37%), Gaps = 54/319 (16%)

Query: 76  TDDTAM----ARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKL-LNP 130
           +DDT M    A ALV++  A +      +  +  Q+  +D D G   G  +V   + L P
Sbjct: 54  SDDTVMHLATAEALVEAGKAPKLTQLYYLLAKHYQDCMEDMD-GRAPGGASVHNAMQLKP 112

Query: 131 KCRDVFEPARAQFNGKGSYGNGGAMRVAGISLAY---SSVQDVQKFARLSAQLTHASSLG 187
              + +   R  FN     G G AMR   I L +   S +  + + +  S ++TH    G
Sbjct: 113 GKPNGW---RIPFNSHEG-GCGAAMRAMCIGLRFPHHSQLDTLIQVSIESGRMTHHHPTG 168

Query: 188 YNGAILQALAVHLALQGES--------------------SSEHFLKQLLGHMEDLEGDAQ 227
           Y GA+  AL    A+                         S +F+++ L H    +   +
Sbjct: 169 YLGALASALFTAYAVNSRPPLQWGKGLMELLPEAKKYIVQSGYFVEENLQHWSYFQTKWE 228

Query: 228 SVLDARELGMEER----PYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYC 283
           + L  R +   E     P S  +K+  +     S +        G G ++    P   Y 
Sbjct: 229 NYLKLRGILDGESAPTFPESFGVKERDQFYTSLSYS--------GWGGSSGHDAPMIAY- 279

Query: 284 FLRCMEPDPEIPSAFNSLQRTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSC 343
                     + +A +S +     +   GGD+D+ A +AG   G  YG   V  S  +  
Sbjct: 280 --------DAVLAAGDSWKELAHRAFFHGGDSDSTAAIAGCWWGVMYGFKGVSPSNYEKL 331

Query: 344 EGYEETDILAQSLHRVFQK 362
           E     +  A++L+ +  K
Sbjct: 332 EYRNRLEETARALYSLGSK 350


>gi|157311604 phosphodiesterase 4D interacting protein isoform 1 [Homo
            sapiens]
          Length = 2346

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 8/109 (7%)

Query: 175  RLSAQLTHAS------SLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQS 228
            RL AQL+H S      +     A+L + +    L+ E   +   +Q L  +EDL    Q 
Sbjct: 1913 RLQAQLSHVSREHSQETESLREALLSSRSHLQELEKELEHQKVERQQL--LEDLREKQQE 1970

Query: 229  VLDARELGMEERPYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESV 277
            VL  RE  +  +   SRL+    LL Q    ++++   L + +  +E++
Sbjct: 1971 VLHFREERLSLQENDSRLQHKLVLLQQQCEEKQQLFESLQSELQIYEAL 2019


>gi|7705555 iroquois homeobox 4 [Homo sapiens]
          Length = 519

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 15/31 (48%), Positives = 16/31 (51%)

Query: 3   AAAMAAAAGGGAGAARSLSRFRGCLAGALLG 33
           A  M+ AAGGGA     L R R CL  A  G
Sbjct: 303 ALRMSLAAGGGAALDEDLERARSCLRSAAAG 333


>gi|145587088 hypothetical protein LOC165186 [Homo sapiens]
          Length = 1019

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 214 QLLGHMEDLEGDAQSVLDARELG--MEERPYSSRLKKIGELLDQASVTREEVVSELGNGI 271
           +L+G    L+G  + V   REL   +E + + SR++ +G+LL+      E V + L    
Sbjct: 749 RLVGLRSTLQGRGEMVEQLRELTRLLEAKDFRSRMEGVGQLLELCKAKTELVTAHLVQVF 808

Query: 272 AAF 274
            AF
Sbjct: 809 DAF 811


>gi|239757214 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 165

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 10  AGGGAGAARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPGTPGSE 68
           +GG AG+  + S F G     L   C G    A +  DL +     Q L+P PG+P S+
Sbjct: 70  SGGAAGSRDNGSSFTGGPERQLTDSCPGPSC-ATEPPDLGASEPRAQELDPVPGSPASQ 127


>gi|169214271 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 165

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 10  AGGGAGAARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPGTPGSE 68
           +GG AG+  + S F G     L   C G    A +  DL +     Q L+P PG+P S+
Sbjct: 70  SGGAAGSRDNGSSFTGGPERQLTDSCPGPSC-ATEPPDLGASEPRAQELDPVPGSPASQ 127


>gi|169213616 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 165

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 10  AGGGAGAARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPGTPGSE 68
           +GG AG+  + S F G     L   C G    A +  DL +     Q L+P PG+P S+
Sbjct: 70  SGGAAGSRDNGSSFTGGPERQLTDSCPGPSC-ATEPPDLGASEPRAQELDPVPGSPASQ 127


>gi|41152076 steroid-sensitive protein 1 [Homo sapiens]
          Length = 950

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 212 LKQLLGHMEDLEGDAQSVLDARELGMEER-PYSSRLKKIGELLDQASVTREEVVSELG 268
           + +L+  ++  +G    VL  + L +EER PY  RL+ + E++DQ  + R E + + G
Sbjct: 219 IPKLMSFLKLEKGKFGMVLLKKTLQVEERYPYPVRLEAMYEVIDQGPIRRIEKIRQKG 276


>gi|41152074 steroid-sensitive protein 1 [Homo sapiens]
          Length = 950

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 212 LKQLLGHMEDLEGDAQSVLDARELGMEER-PYSSRLKKIGELLDQASVTREEVVSELG 268
           + +L+  ++  +G    VL  + L +EER PY  RL+ + E++DQ  + R E + + G
Sbjct: 219 IPKLMSFLKLEKGKFGMVLLKKTLQVEERYPYPVRLEAMYEVIDQGPIRRIEKIRQKG 276


>gi|21362050 coiled-coil domain containing 115 [Homo sapiens]
          Length = 180

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 9/89 (10%)

Query: 201 ALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARE----LGMEERPYSSRLKKIGELLDQA 256
           AL   +  +  + QLLG +E+LEG  ++VL+AR     L + +  Y+   K +G  L  A
Sbjct: 3   ALDLRAELDSLVLQLLGDLEELEG-KRTVLNARVEEGWLSLAKARYAMGAKSVGP-LQYA 60

Query: 257 SVTREEV---VSELGNGIAAFESVPTAIY 282
           S    +V    SE   G+  F+ V   ++
Sbjct: 61  SHMEPQVCLHASEAQEGLQKFKVVRAGVH 89


>gi|187828564 BEN domain containing 5 [Homo sapiens]
          Length = 421

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 16/150 (10%)

Query: 159 GISLAYSSVQDVQKFARLSAQLTHASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGH 218
           G+SL +S+  + + F   S       SL    A++        L+     +  ++ L   
Sbjct: 147 GLSLGHSTCPE-EVFVEASPGTEDMDSL--EDAVVPRALYEELLRNYQQQQEEMRHLQQE 203

Query: 219 MEDLEGDAQSVLDARELGMEERPYSSRLKKIGELLDQASVTREEVVSELGNGIAA-FESV 277
           +E      Q V  A++L    + Y + + ++ EL D     ++ ++  LG+G A   E V
Sbjct: 204 LERTR--RQLVQQAKKL----KEYGALVSEMKELRDLNRRLQDVLLLRLGSGPAIDLEKV 257

Query: 278 PTAIYCFLRCMEPDPEIPSAFNSLQRTLIY 307
            +       C+EP+PE+ S F+    T  Y
Sbjct: 258 KS------ECLEPEPELRSTFSEEANTSSY 281


>gi|227499621 solute carrier family 27 (fatty acid transporter),
           member 2 isoform 2 [Homo sapiens]
          Length = 567

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 39  FYEAHDTVDLTSVLRHVQSLEPDPGTPGSERTEALYYTDDTA 80
           F    DT+++T   +H +    + G   +   +ALY+ DDTA
Sbjct: 505 FLRIQDTIEITGTFKHRKMTLVEEGFNPAVIKDALYFLDDTA 546


>gi|227499619 solute carrier family 27 (fatty acid transporter),
           member 2 isoform 1 [Homo sapiens]
          Length = 620

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 39  FYEAHDTVDLTSVLRHVQSLEPDPGTPGSERTEALYYTDDTA 80
           F    DT+++T   +H +    + G   +   +ALY+ DDTA
Sbjct: 558 FLRIQDTIEITGTFKHRKMTLVEEGFNPAVIKDALYFLDDTA 599


>gi|46488923 astrotactin isoform 1 [Homo sapiens]
          Length = 1294

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 11/68 (16%)

Query: 235  LGMEERPYSSRLKKIGELLDQASVTREEVVSELGNGIAAFES-------VP----TAIYC 283
            +G++   Y  R +K+ + +D + V  E V+S + + I+  +S       VP    T I  
Sbjct: 1050 IGVQIVDYLLRQEKVTDRMDHSKVETETVLSFVDDIISGAKSPCAMPSQVPDKQLTTISL 1109

Query: 284  FLRCMEPD 291
             +RC+EPD
Sbjct: 1110 IIRCLEPD 1117


>gi|46488921 astrotactin isoform 2 [Homo sapiens]
          Length = 1216

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 11/68 (16%)

Query: 235  LGMEERPYSSRLKKIGELLDQASVTREEVVSELGNGIAAFES-------VP----TAIYC 283
            +G++   Y  R +K+ + +D + V  E V+S + + I+  +S       VP    T I  
Sbjct: 1050 IGVQIVDYLLRQEKVTDRMDHSKVETETVLSFVDDIISGAKSPCAMPSQVPDKQLTTISL 1109

Query: 284  FLRCMEPD 291
             +RC+EPD
Sbjct: 1110 IIRCLEPD 1117


>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
           sapiens]
          Length = 152

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%)

Query: 45  TVDLTSVLRHVQSL--EPDPGTPGSERTEALY 74
           T D++S+L  +QSL  EP+P +P + +   LY
Sbjct: 99  TYDVSSILTSIQSLLDEPNPNSPANSQAAQLY 130


>gi|32967278 ubiquitin-conjugating enzyme E2A isoform 3 [Homo
          sapiens]
          Length = 77

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%)

Query: 45 TVDLTSVLRHVQSL--EPDPGTPGSERTEALY 74
          T D++S+L  +QSL  EP+P +P + +   LY
Sbjct: 24 TYDVSSILTSIQSLLDEPNPNSPANSQAAQLY 55


>gi|32967276 ubiquitin-conjugating enzyme E2A isoform 2 [Homo
           sapiens]
          Length = 122

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%)

Query: 45  TVDLTSVLRHVQSL--EPDPGTPGSERTEALY 74
           T D++S+L  +QSL  EP+P +P + +   LY
Sbjct: 69  TYDVSSILTSIQSLLDEPNPNSPANSQAAQLY 100


>gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]
          Length = 152

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%)

Query: 45  TVDLTSVLRHVQSL--EPDPGTPGSERTEALY 74
           T D++S+L  +QSL  EP+P +P + +   LY
Sbjct: 99  TYDVSSILTSIQSLLDEPNPNSPANSQAAQLY 130


>gi|21735598 programmed cell death 4 isoform 2 [Homo sapiens]
          Length = 458

 Score = 28.5 bits (62), Expect = 9.8
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 9/75 (12%)

Query: 178 AQLTHASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGM 237
           A++    +LG   + +  LAV LAL+G++S      +LL    DL G   S  D      
Sbjct: 174 AEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLL---SDLCGTVMSTTDV----- 225

Query: 238 EERPYSSRLKKIGEL 252
            E+ +   LK + EL
Sbjct: 226 -EKSFDKLLKDLPEL 239


>gi|21735596 programmed cell death 4 isoform 1 [Homo sapiens]
          Length = 469

 Score = 28.5 bits (62), Expect = 9.8
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 9/75 (12%)

Query: 178 AQLTHASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGM 237
           A++    +LG   + +  LAV LAL+G++S      +LL    DL G   S  D      
Sbjct: 185 AEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLL---SDLCGTVMSTTDV----- 236

Query: 238 EERPYSSRLKKIGEL 252
            E+ +   LK + EL
Sbjct: 237 -EKSFDKLLKDLPEL 250


>gi|27894373 nuclear DNA-binding protein [Homo sapiens]
          Length = 141

 Score = 28.5 bits (62), Expect = 9.8
 Identities = 16/51 (31%), Positives = 26/51 (50%)

Query: 198 VHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYSSRLKK 248
           V+LA QG +  EH +KQ L  +       + + D ++ G  +R  +SR  K
Sbjct: 69  VYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVK 119


>gi|5453583 nuclear DNA-binding protein [Homo sapiens]
          Length = 141

 Score = 28.5 bits (62), Expect = 9.8
 Identities = 16/51 (31%), Positives = 26/51 (50%)

Query: 198 VHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYSSRLKK 248
           V+LA QG +  EH +KQ L  +       + + D ++ G  +R  +SR  K
Sbjct: 69  VYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVK 119


>gi|21389507 THAP domain containing 6 [Homo sapiens]
          Length = 222

 Score = 28.5 bits (62), Expect = 9.8
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 5/53 (9%)

Query: 209 EHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYSSRLKKIGELLDQASVTRE 261
           +H L  ++G +ED +   ++VLD      E+R   S  K I EL D+  +++E
Sbjct: 152 KHKLDHVIGELEDTKESLRNVLD-----REKRFQKSLRKTIRELKDECLISQE 199


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,104,560
Number of Sequences: 37866
Number of extensions: 552684
Number of successful extensions: 2185
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2168
Number of HSP's gapped (non-prelim): 34
length of query: 363
length of database: 18,247,518
effective HSP length: 104
effective length of query: 259
effective length of database: 14,309,454
effective search space: 3706148586
effective search space used: 3706148586
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.