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Search of human proteins with 14150155
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14150155 vacuolar protein sorting 25 [Homo sapiens]
(176 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14150155 vacuolar protein sorting 25 [Homo sapiens] 363 e-101
gi|110349719 titin isoform N2-A [Homo sapiens] 31 0.49
gi|110349717 titin isoform novex-2 [Homo sapiens] 31 0.49
gi|110349713 titin isoform novex-1 [Homo sapiens] 31 0.49
gi|110349715 titin isoform N2-B [Homo sapiens] 31 0.49
gi|21735548 centrosomal protein 2 [Homo sapiens] 30 0.83
gi|24430183 outer dense fiber of sperm tails 2 isoform 2 [Homo s... 28 3.1
gi|24430181 outer dense fiber of sperm tails 2 isoform 1 [Homo s... 28 3.1
gi|4506787 IQ motif containing GTPase activating protein 1 [Homo... 28 5.4
gi|24497601 endothelial differentiation-related factor 1 isoform... 28 5.4
gi|4503453 endothelial differentiation-related factor 1 isoform ... 28 5.4
gi|148833515 interferon regulatory factor 5 isoform c [Homo sapi... 27 7.0
gi|148833496 interferon regulatory factor 5 isoform b [Homo sapi... 27 7.0
gi|148833494 interferon regulatory factor 5 isoform d [Homo sapi... 27 7.0
gi|148833492 interferon regulatory factor 5 isoform c [Homo sapi... 27 7.0
gi|148833488 interferon regulatory factor 5 isoform c [Homo sapi... 27 7.0
gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens] 27 7.0
gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens] 27 7.0
gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens] 27 7.0
gi|221219020 NYD-SP11 protein [Homo sapiens] 27 9.2
gi|19924149 toll-like receptor 4 precursor [Homo sapiens] 27 9.2
gi|41349456 prolyl endopeptidase [Homo sapiens] 27 9.2
>gi|14150155 vacuolar protein sorting 25 [Homo sapiens]
Length = 176
Score = 363 bits (931), Expect = e-101
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MAMSFEWPWQYRFPPFFTLQPNVDTRQKQLAAWCSLVLSFCRLHKQSSMTVMEAQESPLF 60
MAMSFEWPWQYRFPPFFTLQPNVDTRQKQLAAWCSLVLSFCRLHKQSSMTVMEAQESPLF
Sbjct: 1 MAMSFEWPWQYRFPPFFTLQPNVDTRQKQLAAWCSLVLSFCRLHKQSSMTVMEAQESPLF 60
Query: 61 NNVKLQRKLPVESIQIVLEELRKKGNLEWLDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQ 120
NNVKLQRKLPVESIQIVLEELRKKGNLEWLDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQ
Sbjct: 61 NNVKLQRKLPVESIQIVLEELRKKGNLEWLDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQ 120
Query: 121 NNSVFTLYELTNGEDTEDEEFHGLDEATLLRALQALQQEHKAEIITVSDGRGVKFF 176
NNSVFTLYELTNGEDTEDEEFHGLDEATLLRALQALQQEHKAEIITVSDGRGVKFF
Sbjct: 121 NNSVFTLYELTNGEDTEDEEFHGLDEATLLRALQALQQEHKAEIITVSDGRGVKFF 176
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 31.2 bits (69), Expect = 0.49
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 61 NNVKLQRKLPVESIQIVLEELRKK---GNLEWLDKSKSSFLIMWRRPE-EWGK-LIYQWV 115
N+V L P + + K G LE L SK S + W +PE + GK ++ WV
Sbjct: 30408 NDVGLSETSPASEPVVCKDPFDKPSQPGELEILSISKDSVTLQWEKPECDGGKEILGYWV 30467
Query: 116 SRSGQNNSVFTLYELTNGEDTEDEEF--HGLDEAT 148
+S ++ +N E +D++F GL EAT
Sbjct: 30468 EYRQSGDSA---WKKSNKERIKDKQFTIGGLLEAT 30499
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 31.2 bits (69), Expect = 0.49
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 61 NNVKLQRKLPVESIQIVLEELRKK---GNLEWLDKSKSSFLIMWRRPE-EWGK-LIYQWV 115
N+V L P + + K G LE L SK S + W +PE + GK ++ WV
Sbjct: 24103 NDVGLSETSPASEPVVCKDPFDKPSQPGELEILSISKDSVTLQWEKPECDGGKEILGYWV 24162
Query: 116 SRSGQNNSVFTLYELTNGEDTEDEEF--HGLDEAT 148
+S ++ +N E +D++F GL EAT
Sbjct: 24163 EYRQSGDSA---WKKSNKERIKDKQFTIGGLLEAT 24194
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 31.2 bits (69), Expect = 0.49
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 61 NNVKLQRKLPVESIQIVLEELRKK---GNLEWLDKSKSSFLIMWRRPE-EWGK-LIYQWV 115
N+V L P + + K G LE L SK S + W +PE + GK ++ WV
Sbjct: 24036 NDVGLSETSPASEPVVCKDPFDKPSQPGELEILSISKDSVTLQWEKPECDGGKEILGYWV 24095
Query: 116 SRSGQNNSVFTLYELTNGEDTEDEEF--HGLDEAT 148
+S ++ +N E +D++F GL EAT
Sbjct: 24096 EYRQSGDSA---WKKSNKERIKDKQFTIGGLLEAT 24127
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 31.2 bits (69), Expect = 0.49
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 61 NNVKLQRKLPVESIQIVLEELRKK---GNLEWLDKSKSSFLIMWRRPE-EWGK-LIYQWV 115
N+V L P + + K G LE L SK S + W +PE + GK ++ WV
Sbjct: 23911 NDVGLSETSPASEPVVCKDPFDKPSQPGELEILSISKDSVTLQWEKPECDGGKEILGYWV 23970
Query: 116 SRSGQNNSVFTLYELTNGEDTEDEEF--HGLDEAT 148
+S ++ +N E +D++F GL EAT
Sbjct: 23971 EYRQSGDSA---WKKSNKERIKDKQFTIGGLLEAT 24002
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 30.4 bits (67), Expect = 0.83
Identities = 25/123 (20%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 47 SSMTVMEAQESPLFNNVKLQRKLPVESIQIVLEELRKKGNLEWLDKSKSSFLIMWRRPEE 106
S+ T+ + ++ ++ +L+ L ++ +I ++LR + +++ L ++ + R +E
Sbjct: 1997 STATLQASLDACQAHSRQLEEALRIQEGEIQDQDLRYQEDVQQLQQALAQRDEELRHQQE 2056
Query: 107 WGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHGLDEATLLRALQALQQEHKAEIIT 166
+L+ + +++ Q N + L G++ E+EE GL ++ +R LQ + + EI+
Sbjct: 2057 REQLLEKSLAQRVQENMIQEKQNL--GQEREEEEIRGLHQS--VRELQLTLAQKEQEILE 2112
Query: 167 VSD 169
+ +
Sbjct: 2113 LRE 2115
>gi|24430183 outer dense fiber of sperm tails 2 isoform 2 [Homo
sapiens]
Length = 638
Score = 28.5 bits (62), Expect = 3.1
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 27 QKQLAAWCSLVLSFCRLHKQSSMTVMEAQESPLFNNVKL------QRKLPVESIQIVLEE 80
Q + A+ S + R H Q+ + EA+ S L +K Q K VE+I L+E
Sbjct: 312 QAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKE 371
Query: 81 LRKKGN 86
L++KG+
Sbjct: 372 LKQKGD 377
>gi|24430181 outer dense fiber of sperm tails 2 isoform 1 [Homo
sapiens]
Length = 805
Score = 28.5 bits (62), Expect = 3.1
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 27 QKQLAAWCSLVLSFCRLHKQSSMTVMEAQESPLFNNVKL------QRKLPVESIQIVLEE 80
Q + A+ S + R H Q+ + EA+ S L +K Q K VE+I L+E
Sbjct: 307 QAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKE 366
Query: 81 LRKKGN 86
L++KG+
Sbjct: 367 LKQKGD 372
>gi|4506787 IQ motif containing GTPase activating protein 1 [Homo
sapiens]
Length = 1657
Score = 27.7 bits (60), Expect = 5.4
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 21/100 (21%)
Query: 82 RKKGNLEWLDKSKSS--------FLIMWRRPEEWGKLIYQW---VSRSGQNNSVFTLYEL 130
++KG L+ L K K F ++ P KLI+Q S ++ +FTLY
Sbjct: 953 KQKGGLKALSKEKREKLEAYQHLFYLLQTNPTYLAKLIFQMPQNKSTKFMDSVIFTLYNY 1012
Query: 131 TNGEDTEDEEFHGLDEATLLRALQ-ALQQEHKAEIITVSD 169
+ + +E LLR + ALQ+E K+++ + +
Sbjct: 1013 ASNQ---------REEYLLLRLFKTALQEEIKSKVDQIQE 1043
>gi|24497601 endothelial differentiation-related factor 1 isoform
beta [Homo sapiens]
Length = 139
Score = 27.7 bits (60), Expect = 5.4
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 81 LRKKGNLEWLDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEE 140
LRKKG KSK + L RR E+ + +W +GQN ++ + T D E EE
Sbjct: 12 LRKKGPTAAQAKSKQAILAAQRRGED-VETSKKWA--AGQNKQ-HSITKNTAKLDRETEE 67
Query: 141 FHGLDEATLLRALQALQQEHKAEIITVSD 169
H + L + +QQ +++ +T D
Sbjct: 68 LH--HDRVTLEVGKVIQQGRQSKGLTQKD 94
>gi|4503453 endothelial differentiation-related factor 1 isoform
alpha [Homo sapiens]
Length = 148
Score = 27.7 bits (60), Expect = 5.4
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 81 LRKKGNLEWLDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEE 140
LRKKG KSK + L RR E+ + +W +GQN ++ + T D E EE
Sbjct: 12 LRKKGPTAAQAKSKQAILAAQRRGED-VETSKKWA--AGQNKQ-HSITKNTAKLDRETEE 67
Query: 141 FHGLDEATLLRALQALQQEHKAEIITVSD 169
H + L + +QQ +++ +T D
Sbjct: 68 LH--HDRVTLEVGKVIQQGRQSKGLTQKD 94
>gi|148833515 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 27.3 bits (59), Expect = 7.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query: 87 LEWLDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHGLDE 146
L+W++ K F I WR G S+ G +N++F + G+ TE G+DE
Sbjct: 33 LQWVNGEKKLFCIPWRHATRHGP------SQDG-DNTIFKAWAKETGKYTE-----GVDE 80
Query: 147 A 147
A
Sbjct: 81 A 81
>gi|148833496 interferon regulatory factor 5 isoform b [Homo
sapiens]
Length = 498
Score = 27.3 bits (59), Expect = 7.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query: 87 LEWLDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHGLDE 146
L+W++ K F I WR G S+ G +N++F + G+ TE G+DE
Sbjct: 33 LQWVNGEKKLFCIPWRHATRHGP------SQDG-DNTIFKAWAKETGKYTE-----GVDE 80
Query: 147 A 147
A
Sbjct: 81 A 81
>gi|148833494 interferon regulatory factor 5 isoform d [Homo
sapiens]
Length = 514
Score = 27.3 bits (59), Expect = 7.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query: 87 LEWLDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHGLDE 146
L+W++ K F I WR G S+ G +N++F + G+ TE G+DE
Sbjct: 33 LQWVNGEKKLFCIPWRHATRHGP------SQDG-DNTIFKAWAKETGKYTE-----GVDE 80
Query: 147 A 147
A
Sbjct: 81 A 81
>gi|148833492 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 27.3 bits (59), Expect = 7.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query: 87 LEWLDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHGLDE 146
L+W++ K F I WR G S+ G +N++F + G+ TE G+DE
Sbjct: 33 LQWVNGEKKLFCIPWRHATRHGP------SQDG-DNTIFKAWAKETGKYTE-----GVDE 80
Query: 147 A 147
A
Sbjct: 81 A 81
>gi|148833488 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 27.3 bits (59), Expect = 7.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query: 87 LEWLDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHGLDE 146
L+W++ K F I WR G S+ G +N++F + G+ TE G+DE
Sbjct: 33 LQWVNGEKKLFCIPWRHATRHGP------SQDG-DNTIFKAWAKETGKYTE-----GVDE 80
Query: 147 A 147
A
Sbjct: 81 A 81
>gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens]
Length = 498
Score = 27.3 bits (59), Expect = 7.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query: 87 LEWLDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHGLDE 146
L+W++ K F I WR G S+ G +N++F + G+ TE G+DE
Sbjct: 33 LQWVNGEKKLFCIPWRHATRHGP------SQDG-DNTIFKAWAKETGKYTE-----GVDE 80
Query: 147 A 147
A
Sbjct: 81 A 81
>gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens]
Length = 504
Score = 27.3 bits (59), Expect = 7.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query: 87 LEWLDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHGLDE 146
L+W++ K F I WR G S+ G +N++F + G+ TE G+DE
Sbjct: 33 LQWVNGEKKLFCIPWRHATRHGP------SQDG-DNTIFKAWAKETGKYTE-----GVDE 80
Query: 147 A 147
A
Sbjct: 81 A 81
>gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens]
Length = 1041
Score = 27.3 bits (59), Expect = 7.0
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 45 KQSSMTVMEAQESPLFNNVKLQRKLPVESIQIVLEELRKKGNLEWLDK 92
K + V+E + + + + K+ E + ++ ELRKK E+L K
Sbjct: 190 KDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMIPELRKKSRREYLAK 237
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 26.9 bits (58), Expect = 9.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 77 VLEELRKKGNLEWLDKSKSSFLIMWRR 103
+L++L KGNLEWL +K ++ R
Sbjct: 2552 LLKDLASKGNLEWLHLAKHEAIVYRHR 2578
>gi|19924149 toll-like receptor 4 precursor [Homo sapiens]
Length = 839
Score = 26.9 bits (58), Expect = 9.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 42 RLHKQSSMTVMEAQESPLFNNVKLQRKLPVESIQIVLEELRKKGNLEWLDKS 93
RLHK +T+ +S +Q +E ++VL E R +GNLE DKS
Sbjct: 227 RLHK---LTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKS 275
>gi|41349456 prolyl endopeptidase [Homo sapiens]
Length = 710
Score = 26.9 bits (58), Expect = 9.2
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 55 QESPLFNNVKLQRKLPVESIQIVLEELRKKGNLEWLDKSKSSFLIM 100
++SP + + + + P ES VL +K LEW+ +S+FL++
Sbjct: 306 RQSPNYRVINIDFRDPEESKWKVLVPEHEKDVLEWIACVRSNFLVL 351
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,631,896
Number of Sequences: 37866
Number of extensions: 264213
Number of successful extensions: 828
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 764
Number of HSP's gapped (non-prelim): 82
length of query: 176
length of database: 18,247,518
effective HSP length: 95
effective length of query: 81
effective length of database: 14,650,248
effective search space: 1186670088
effective search space used: 1186670088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.