VPS25 3792

Name: VPS25	Sequence: fasta or formatted (176aa)		NCBI GI: 14150155
Description: vacuolar protein sorting 25		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 8 2 C cysteine 1.1 2 1 D aspartate 3.4 6 1 E glutamate 9.7 17 2 F phenylalanine 6.2 11 2 G glycine 4.0 7 1 H histidine 1.7 3 1 I isoleucine 3.4 6 2 K lysine 6.2 11 2 L leucine 11.9 21 2 M methionine 2.8 5 1 N asparagine 4.0 7 2 P proline 4.0 7 2 Q glutamine 7.4 13 2 R arginine 5.7 10 2 S serine 8.0 14 2 T threonine 4.5 8 1 V valine 5.7 10 1 W tryptophan 4.0 7 1 Y tyrosine 1.7 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vacuolar protein sorting 25 TTN 0.018 titin isoform N2-A TTN 0.018 titin isoform novex-2 TTN 0.018 titin isoform novex-1 TTN 0.018 titin isoform N2-B CEP250 0.015 centrosomal protein 2 ODF2 0.009 outer dense fiber of sperm tails 2 isoform 2 ODF2 0.009 outer dense fiber of sperm tails 2 isoform 1 IQGAP1 0.009 IQ motif containing GTPase activating protein 1 [Homo... EDF1 0.009 endothelial differentiation-related factor 1 isoform... EDF1 0.009 endothelial differentiation-related factor 1 isoform ... IRF5 0.006 interferon regulatory factor 5 isoform c IRF5 0.006 interferon regulatory factor 5 isoform b IRF5 0.006 interferon regulatory factor 5 isoform d IRF5 0.006 interferon regulatory factor 5 isoform c IRF5 0.006 interferon regulatory factor 5 isoform c IRF5 0.006 interferon regulatory factor 5 isoform b IRF5 0.006 interferon regulatory factor 5 isoform a DHX16 0.006 DEAH (Asp-Glu-Ala-His) box polypeptide 16 WDR87 0.006 NYD-SP11 protein TLR4 0.006 toll-like receptor 4 precursor PREP 0.006 prolyl endopeptidase Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.