Guide to the Human Genome
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Search of human proteins with 89062025

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens]
         (150 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens]            313   5e-86
gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens]             313   5e-86
gi|9507239 immunoglobulin iota chain precursor [Homo sapiens]         144   4e-35
gi|239757666 PREDICTED: similar to hCG2040021 [Homo sapiens]          124   4e-29
gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo ...   123   7e-29
gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens]     116   8e-27
gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens]          101   2e-22
gi|7019567 pre-B lymphocyte 3 [Homo sapiens]                           99   1e-21
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]           74   5e-14
gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens]           73   8e-14
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]           70   5e-13
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ...    70   5e-13
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]             70   7e-13
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ...    70   7e-13
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]             70   7e-13
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]           67   4e-12
gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo...    67   6e-12
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]           66   1e-11
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]           66   1e-11
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]           66   1e-11
gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo ...    65   2e-11
gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens]           64   4e-11
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ...    64   5e-11
gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens]           61   3e-10
gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo ...    61   3e-10
gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens]           59   2e-09
gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens]           59   2e-09
gi|239756211 PREDICTED: similar to pre-B lymphocyte gene 2 [Homo...    56   1e-08
gi|239750752 PREDICTED: hypothetical protein XP_002347494 [Homo ...    56   1e-08
gi|169217835 PREDICTED: similar to hCG2038921 [Homo sapiens]           55   2e-08

>gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens]
          Length = 150

 Score =  313 bits (801), Expect = 5e-86
 Identities = 150/150 (100%), Positives = 150/150 (100%)

Query: 1   MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
           MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK
Sbjct: 1   MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60

Query: 61  PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
           PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS
Sbjct: 61  PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120

Query: 121 STSHSDTHTWGSGTKTSPCSHSCSVTIFKL 150
           STSHSDTHTWGSGTKTSPCSHSCSVTIFKL
Sbjct: 121 STSHSDTHTWGSGTKTSPCSHSCSVTIFKL 150


>gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens]
          Length = 150

 Score =  313 bits (801), Expect = 5e-86
 Identities = 150/150 (100%), Positives = 150/150 (100%)

Query: 1   MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
           MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK
Sbjct: 1   MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60

Query: 61  PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
           PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS
Sbjct: 61  PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120

Query: 121 STSHSDTHTWGSGTKTSPCSHSCSVTIFKL 150
           STSHSDTHTWGSGTKTSPCSHSCSVTIFKL
Sbjct: 121 STSHSDTHTWGSGTKTSPCSHSCSVTIFKL 150


>gi|9507239 immunoglobulin iota chain precursor [Homo sapiens]
          Length = 145

 Score =  144 bits (362), Expect = 4e-35
 Identities = 68/126 (53%), Positives = 87/126 (69%)

Query: 1   MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
           M+W P+LL+   +CTG   QPVL QP ++S++ G + R TCTLR+  ++G Y +YWYQQ+
Sbjct: 1   MSWAPVLLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQR 60

Query: 61  PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
           PG  PR+LLRY S SDK QG  VP RFSGSKD + N G L IS LQ EDEA YYCA+   
Sbjct: 61  PGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGAR 120

Query: 121 STSHSD 126
           S+   +
Sbjct: 121 SSEKEE 126


>gi|239757666 PREDICTED: similar to hCG2040021 [Homo sapiens]
          Length = 137

 Score =  124 bits (310), Expect = 4e-29
 Identities = 66/124 (53%), Positives = 83/124 (66%), Gaps = 9/124 (7%)

Query: 1   MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
           MAWT LLL  LSHCTGS++  VLTQP S+S +PG +AR TC    G N+G+  ++WYQQK
Sbjct: 1   MAWTVLLLGLLSHCTGSVTSYVLTQPPSVSVAPGKTARITC---GGNNIGSKSVHWYQQK 57

Query: 61  PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
           PG  P  +L    DSD+   SG+P RFSGS   S N   L IS +++ DEADYYC +W S
Sbjct: 58  PGQAP--VLVVYDDSDRP--SGIPERFSGSN--SGNTATLTISRVEAGDEADYYCQVWDS 111

Query: 121 STSH 124
           S+ H
Sbjct: 112 SSDH 115


>gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo
           sapiens]
          Length = 264

 Score =  123 bits (308), Expect = 7e-29
 Identities = 71/151 (47%), Positives = 92/151 (60%), Gaps = 10/151 (6%)

Query: 1   MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
           MA  PLLL  L+HC GS +Q VLTQP S S +PG     +C+  S  N+G+  + WYQQ 
Sbjct: 27  MASFPLLLTLLTHCAGSWAQSVLTQPPSASGTPGQRVTISCS-GSSSNIGSNTVNWYQQL 85

Query: 61  PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
           PG+ P+ L+     S+ Q+ SGVP RFSGSK  ++ +  L ISGLQSEDEADYYCA W  
Sbjct: 86  PGTAPKLLIY----SNNQRPSGVPDRFSGSKSGTSAS--LAISGLQSEDEADYYCAAWDD 139

Query: 121 STSHSDTHTWGSGTKTSPCSH---SCSVTIF 148
           S +      +G GTK +       + SVT+F
Sbjct: 140 SLNGPTCWVFGGGTKLTVLGQPKAAPSVTLF 170


>gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens]
          Length = 288

 Score =  116 bits (290), Expect = 8e-27
 Identities = 70/140 (50%), Positives = 87/140 (62%), Gaps = 9/140 (6%)

Query: 1   MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYR-IYWYQQ 59
           MAW  L L  L+  TGS +Q  LTQP S+S SPG S   +CT  S  +VG Y  + WYQQ
Sbjct: 1   MAWALLFLTLLTQGTGSWAQSALTQPASVSGSPGQSITISCTGTSS-DVGGYNYVSWYQQ 59

Query: 60  KPGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIW- 118
            PG  P+ ++   S+    + SGV +RFSGSK  S N   L ISGLQ+EDEADYYC+ + 
Sbjct: 60  HPGKAPKLMIYDVSN----RPSGVSNRFSGSK--SGNTASLTISGLQAEDEADYYCSSYT 113

Query: 119 YSSTSHSDTHTWGSGTKTSP 138
            SST HS   +WG+ TKT P
Sbjct: 114 SSSTLHSGPSSWGTETKTCP 133



 Score = 73.2 bits (178), Expect = 8e-14
 Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 13/113 (11%)

Query: 3   WTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
           W PLL    S   GS++   LTQP ++S SPG +AR +C   SG  +      WY QKPG
Sbjct: 185 WPPLL----SSPAGSVASYELTQPPAVSVSPGQTARISC---SGDVLRDNYADWYPQKPG 237

Query: 63  SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
             P  L+ YK   D ++ SG+P RFSGS   +T A  L IS + ++  ADYYC
Sbjct: 238 QAP-VLVIYK---DGERPSGIPERFSGSTSGNTTA--LTISRVLTKGGADYYC 284


>gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens]
          Length = 645

 Score =  101 bits (252), Expect = 2e-22
 Identities = 64/133 (48%), Positives = 79/133 (59%), Gaps = 12/133 (9%)

Query: 1   MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
           MAW PLLL  L  CT S++   LTQP+S+S SPG +AR TC   SG  +      W+QQK
Sbjct: 470 MAWIPLLLPLLILCTVSVASYELTQPSSVSVSPGQTARITC---SGDVLAKKYARWFQQK 526

Query: 61  PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
           PG  P  L+ YK   D ++ SG+P RFSGS   +T    L ISG Q EDEADYYC   YS
Sbjct: 527 PGQAP-VLVIYK---DSERPSGIPERFSGSSSGTTVT--LTISGAQVEDEADYYC---YS 577

Query: 121 STSHSDTHTWGSG 133
           +  ++ T T   G
Sbjct: 578 AADNNLTVTQADG 590



 Score = 43.5 bits (101), Expect = 7e-05
 Identities = 34/112 (30%), Positives = 42/112 (37%), Gaps = 37/112 (33%)

Query: 17  SLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPRYLLRYKSDSD 76
           S  +  LTQP S+  SPG S   +CT  S  +VG Y                        
Sbjct: 359 SAPRSALTQPHSVPGSPGQSVTISCTGTSS-DVGHYNYV--------------------- 396

Query: 77  KQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSSTSHSDTH 128
                            S N   + ISGLQ+EDEADYYC+ + SS      H
Sbjct: 397 ---------------SCSGNMASMTISGLQAEDEADYYCSSYTSSNIFHSGH 433


>gi|7019567 pre-B lymphocyte 3 [Homo sapiens]
          Length = 123

 Score = 99.0 bits (245), Expect = 1e-21
 Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 1/104 (0%)

Query: 17  SLSQPVLTQPTSLSASPGASARFTCTLR-SGINVGTYRIYWYQQKPGSLPRYLLRYKSDS 75
           S+SQ VL Q  +L   PG  A+ +CTL    + +  Y + WYQQ+ GS PRYLL Y+S+ 
Sbjct: 16  SVSQTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEE 75

Query: 76  DKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWY 119
           D  + + +P RFS +KD + NA +L IS +Q ED+ADYYC++ Y
Sbjct: 76  DHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVGY 119


>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
          Length = 151

 Score = 73.9 bits (180), Expect = 5e-14
 Identities = 54/133 (40%), Positives = 71/133 (53%), Gaps = 12/133 (9%)

Query: 6   LLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSL 64
           LLLL+L   TG +   V+TQ P +LS SPG  A  +C  R+  +V +  + WYQQKPG  
Sbjct: 10  LLLLWLPDTTGEI---VMTQSPATLSLSPGERATLSC--RASQSVSSSYLSWYQQKPGQA 64

Query: 65  PRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSSTSH 124
           PR L+   S     + +G+P+RFSGS   S     L IS LQ ED A YYC   Y+    
Sbjct: 65  PRLLIYGAS----TRATGIPARFSGS--GSGTDFTLTISSLQPEDFAVYYCQQDYNLPPT 118

Query: 125 SDTHTWGSGTKTS 137
              H   + T+ S
Sbjct: 119 VIQHETKTSTRPS 131


>gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens]
          Length = 142

 Score = 73.2 bits (178), Expect = 8e-14
 Identities = 52/118 (44%), Positives = 64/118 (54%), Gaps = 15/118 (12%)

Query: 6   LLLLFL--SHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGS 63
           LLLL+L  + C   ++Q     P+SLSAS G     TC    GI+     + WYQQKPG 
Sbjct: 21  LLLLWLPGTRCDIQMTQ----SPSSLSASVGDRVTITCRASQGISNS---LAWYQQKPGK 73

Query: 64  LPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSS 121
            P+ LL   S  +    SGVPSRFSGS   +     L IS LQ ED A YYC  +YS+
Sbjct: 74  APKLLLYAASRLE----SGVPSRFSGSGSGTDYT--LTISSLQPEDFATYYCQQYYST 125


>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
          Length = 152

 Score = 70.5 bits (171), Expect = 5e-13
 Identities = 53/117 (45%), Positives = 66/117 (56%), Gaps = 12/117 (10%)

Query: 6   LLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSL 64
           LLLL+L   TG +   VLTQ P +LS SPG  A  +C      +V +  + WYQQKPG  
Sbjct: 10  LLLLWLPDTTGEI---VLTQSPATLSLSPGERATLSCGASQ--SVSSSYLAWYQQKPGLA 64

Query: 65  PRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSS 121
           PR LL Y + S   + +G+P RFSGS   S     L IS L+ ED A YYC  + SS
Sbjct: 65  PR-LLIYDASS---RATGIPDRFSGS--GSGTDFTLTISRLEPEDFAVYYCQQYGSS 115


>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
           sapiens]
          Length = 152

 Score = 70.5 bits (171), Expect = 5e-13
 Identities = 53/117 (45%), Positives = 66/117 (56%), Gaps = 12/117 (10%)

Query: 6   LLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSL 64
           LLLL+L   TG +   VLTQ P +LS SPG  A  +C      +V +  + WYQQKPG  
Sbjct: 10  LLLLWLPDTTGEI---VLTQSPATLSLSPGERATLSCGASQ--SVSSSYLAWYQQKPGLA 64

Query: 65  PRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSS 121
           PR LL Y + S   + +G+P RFSGS   S     L IS L+ ED A YYC  + SS
Sbjct: 65  PR-LLIYDASS---RATGIPDRFSGS--GSGTDFTLTISRLEPEDFAVYYCQQYGSS 115


>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
          Length = 191

 Score = 70.1 bits (170), Expect = 7e-13
 Identities = 51/116 (43%), Positives = 59/116 (50%), Gaps = 11/116 (9%)

Query: 6   LLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLP 65
           LLLL+L      +   V   P+SLSAS G     TC    GI+ G   + WYQQKPG  P
Sbjct: 12  LLLLWLRGARCDIQ--VTQSPSSLSASVGDRVTITCRASQGISNG---LSWYQQKPGQAP 66

Query: 66  RYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSS 121
             L+   S       SGVPSRFSGS   S     L IS LQ ED A YYC   Y++
Sbjct: 67  TLLIYAASSLQ----SGVPSRFSGS--GSGTDFTLTISSLQPEDVATYYCLQDYTT 116


>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
           sapiens]
          Length = 155

 Score = 70.1 bits (170), Expect = 7e-13
 Identities = 51/116 (43%), Positives = 59/116 (50%), Gaps = 11/116 (9%)

Query: 6   LLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLP 65
           LLLL+L      +   V   P+SLSAS G     TC    GI+ G   + WYQQKPG  P
Sbjct: 12  LLLLWLRGARCDIQ--VTQSPSSLSASVGDRVTITCRASQGISNG---LSWYQQKPGQAP 66

Query: 66  RYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSS 121
             L+   S       SGVPSRFSGS   S     L IS LQ ED A YYC   Y++
Sbjct: 67  TLLIYAASSLQ----SGVPSRFSGS--GSGTDFTLTISSLQPEDVATYYCLQDYTT 116


>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
          Length = 191

 Score = 70.1 bits (170), Expect = 7e-13
 Identities = 51/116 (43%), Positives = 59/116 (50%), Gaps = 11/116 (9%)

Query: 6   LLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLP 65
           LLLL+L      +   V   P+SLSAS G     TC    GI+ G   + WYQQKPG  P
Sbjct: 12  LLLLWLRGARCDIQ--VTQSPSSLSASVGDRVTITCRASQGISNG---LSWYQQKPGQAP 66

Query: 66  RYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSS 121
             L+   S       SGVPSRFSGS   S     L IS LQ ED A YYC   Y++
Sbjct: 67  TLLIYAASSLQ----SGVPSRFSGS--GSGTDFTLTISSLQPEDVATYYCLQDYTT 116


>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
          Length = 157

 Score = 67.4 bits (163), Expect = 4e-12
 Identities = 47/117 (40%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 22  VLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPRYLLRYKSDSDKQQG 80
           V+TQ P +LS SPG  A  +C  R+  +V +  + WYQQKPG  PR L+   S     + 
Sbjct: 28  VMTQSPATLSLSPGERATLSC--RASQSVSSSYLSWYQQKPGQAPRLLIYGAS----TRA 81

Query: 81  SGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSSTSHSDTHTWGSGTKTS 137
           +G+P+RFSGS   S     L IS LQ ED A YYC   Y+       H   + T+ S
Sbjct: 82  TGIPARFSGS--GSGTDFTLTISSLQPEDFAVYYCQQDYNLPPTVIQHETKTSTRPS 136


>gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo
           sapiens]
          Length = 123

 Score = 67.0 bits (162), Expect = 6e-12
 Identities = 51/112 (45%), Positives = 60/112 (53%), Gaps = 15/112 (13%)

Query: 6   LLLLFL--SHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGS 63
           LLLL+L  + C   L+Q     P+ LSAS G     TC    GI+  +Y + WYQQKPG 
Sbjct: 12  LLLLWLPGARCDIQLTQ----SPSFLSASVGDRVTITCRASQGIS--SY-LAWYQQKPGK 64

Query: 64  LPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
            P+ L+   S       SGVPSRFSGS   S     L IS LQ ED A YYC
Sbjct: 65  APKLLIYAASTLQ----SGVPSRFSGS--GSGTEFTLTISSLQPEDFATYYC 110


>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 296

 Score = 65.9 bits (159), Expect = 1e-11
 Identities = 48/113 (42%), Positives = 57/113 (50%), Gaps = 10/113 (8%)

Query: 4   TPLLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
           T LL L +    G+     +TQ P+SLSAS G     TC    GI+     + WYQQKPG
Sbjct: 178 TQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGIS---NNLNWYQQKPG 234

Query: 63  SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
             P+ L+   S       SG+PSRFS S   S     L IS LQ ED A YYC
Sbjct: 235 KTPKLLIYAASSLQ----SGIPSRFSDS--GSGTDYTLTISSLQPEDFATYYC 281


>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 242

 Score = 65.9 bits (159), Expect = 1e-11
 Identities = 48/113 (42%), Positives = 57/113 (50%), Gaps = 10/113 (8%)

Query: 4   TPLLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
           T LL L +    G+     +TQ P+SLSAS G     TC    GI+     + WYQQKPG
Sbjct: 124 TQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGIS---NNLNWYQQKPG 180

Query: 63  SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
             P+ L+   S       SG+PSRFS S   S     L IS LQ ED A YYC
Sbjct: 181 KTPKLLIYAASSLQ----SGIPSRFSDS--GSGTDYTLTISSLQPEDFATYYC 227


>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 242

 Score = 65.9 bits (159), Expect = 1e-11
 Identities = 48/113 (42%), Positives = 57/113 (50%), Gaps = 10/113 (8%)

Query: 4   TPLLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
           T LL L +    G+     +TQ P+SLSAS G     TC    GI+     + WYQQKPG
Sbjct: 124 TQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGIS---NNLNWYQQKPG 180

Query: 63  SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
             P+ L+   S       SG+PSRFS S   S     L IS LQ ED A YYC
Sbjct: 181 KTPKLLIYAASSLQ----SGIPSRFSDS--GSGTDYTLTISSLQPEDFATYYC 227


>gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo
           sapiens]
          Length = 162

 Score = 65.1 bits (157), Expect = 2e-11
 Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 13/104 (12%)

Query: 12  SHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPRYLLRY 71
           + C   ++QP    P+SLSAS G S   TC         T ++ WYQQKPG  P+ LL Y
Sbjct: 70  ARCAIQMTQP----PSSLSASVGDSVTITCRASQSF---TNQLAWYQQKPGKAPK-LLIY 121

Query: 72  KSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
           +  S +   +GVPS FSGS+  +     L IS LQ +D A YYC
Sbjct: 122 RVSSLQ---TGVPSLFSGSESGTDFT--LTISSLQPDDVATYYC 160


>gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 295

 Score = 64.3 bits (155), Expect = 4e-11
 Identities = 47/113 (41%), Positives = 56/113 (49%), Gaps = 10/113 (8%)

Query: 4   TPLLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
           T LL L      G+     +TQ P+SLSAS G     TC    GI+     + WYQQKPG
Sbjct: 177 TQLLGLLGLWLPGARCDIQMTQSPSSLSASVGGRVTITCRASQGIS---NNLNWYQQKPG 233

Query: 63  SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
             P+ L+   S       SG+PSRFS S   +     L IS LQ ED A YYC
Sbjct: 234 KTPKLLIYAASSLQ----SGIPSRFSDSGSGADYT--LTISSLQPEDFAAYYC 280


>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
           sapiens]
          Length = 636

 Score = 63.9 bits (154), Expect = 5e-11
 Identities = 46/113 (40%), Positives = 56/113 (49%), Gaps = 10/113 (8%)

Query: 4   TPLLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
           T LL L +    G+     +TQ P+SLSAS G     TC    GI+     + WYQQKPG
Sbjct: 518 TQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGIS---NNLNWYQQKPG 574

Query: 63  SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
             P+ L+   S       SG+PSRFS S   +     L I  LQ ED A YYC
Sbjct: 575 KTPKLLIYAASSLQ----SGIPSRFSDSGSGADYT--LTIRSLQPEDFATYYC 621


>gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 276

 Score = 61.2 bits (147), Expect = 3e-10
 Identities = 40/90 (44%), Positives = 46/90 (51%), Gaps = 9/90 (10%)

Query: 26  PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPRYLLRYKSDSDKQQGSGVPS 85
           P+SLSAS G     TC    GI   +  + WYQQKP   P+ L+   S       SG+PS
Sbjct: 181 PSSLSASVGGRVTITCRASQGI---SNNLNWYQQKPRKTPKLLIYAASSLQ----SGIPS 233

Query: 86  RFSGSKDASTNAGLLLISGLQSEDEADYYC 115
           RFS S   S     L IS LQ ED A YYC
Sbjct: 234 RFSDS--GSGTDYTLTISSLQPEDFATYYC 261


>gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo
           sapiens]
          Length = 761

 Score = 61.2 bits (147), Expect = 3e-10
 Identities = 40/90 (44%), Positives = 46/90 (51%), Gaps = 9/90 (10%)

Query: 26  PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPRYLLRYKSDSDKQQGSGVPS 85
           P+SLSAS G     TC    GI   +  + WYQQKP   P+ L+   S       SG+PS
Sbjct: 666 PSSLSASVGGRVTITCRASQGI---SNNLNWYQQKPRKTPKLLIYAASSLQ----SGIPS 718

Query: 86  RFSGSKDASTNAGLLLISGLQSEDEADYYC 115
           RFS S   S     L IS LQ ED A YYC
Sbjct: 719 RFSDS--GSGTDYTLTISSLQPEDFATYYC 746


>gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 205

 Score = 58.9 bits (141), Expect = 2e-09
 Identities = 44/113 (38%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 4   TPLLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
           T LL L +    G      +TQ P+SLSAS G     TC    GI      + WYQ+KPG
Sbjct: 87  TQLLGLLVFWLPGVRCDIQMTQSPSSLSASVGDRVTITCRASQGI---INNLNWYQKKPG 143

Query: 63  SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
             P+ L+   S       SG+P+RFS S   +       IS LQ ED A YYC
Sbjct: 144 KTPKLLIYAASSLQ----SGIPTRFSDSGSGTDYTP--TISSLQPEDFATYYC 190


>gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 205

 Score = 58.9 bits (141), Expect = 2e-09
 Identities = 44/113 (38%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 4   TPLLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
           T LL L +    G      +TQ P+SLSAS G     TC    GI      + WYQ+KPG
Sbjct: 87  TQLLGLLVFWLPGVRCDIQMTQSPSSLSASVGDRVTITCRASQGI---INNLNWYQKKPG 143

Query: 63  SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
             P+ L+   S       SG+P+RFS S   +       IS LQ ED A YYC
Sbjct: 144 KTPKLLIYAASSLQ----SGIPTRFSDSGSGTDYTP--TISSLQPEDFATYYC 190


>gi|239756211 PREDICTED: similar to pre-B lymphocyte gene 2 [Homo
           sapiens]
          Length = 120

 Score = 55.8 bits (133), Expect = 1e-08
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 6/119 (5%)

Query: 1   MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
           M WT  +L  ++  TG+ SQ  L Q  +    PGAS + +C   SG    +Y I W +Q 
Sbjct: 1   MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCK-ASGYTFTSYGISWVRQA 59

Query: 61  PG---SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCA 116
           PG       ++  Y  +++  Q   +  R + + D ST+   + +  L+S+D A YYCA
Sbjct: 60  PGQGLEWMGWISAYNGNTNYAQ--KLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCA 116


>gi|239750752 PREDICTED: hypothetical protein XP_002347494 [Homo
           sapiens]
          Length = 120

 Score = 55.8 bits (133), Expect = 1e-08
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 6/119 (5%)

Query: 1   MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
           M WT  +L  ++  TG+ SQ  L Q  +    PGAS + +C   SG    +Y I W +Q 
Sbjct: 1   MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCK-ASGYTFTSYGISWVRQA 59

Query: 61  PG---SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCA 116
           PG       ++  Y  +++  Q   +  R + + D ST+   + +  L+S+D A YYCA
Sbjct: 60  PGQGLEWMGWISAYNGNTNYAQ--KLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCA 116


>gi|169217835 PREDICTED: similar to hCG2038921 [Homo sapiens]
          Length = 120

 Score = 55.1 bits (131), Expect = 2e-08
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 2/111 (1%)

Query: 7   LLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPR 66
           +LL ++  TG+ ++  L Q  +    PGA+ + +C + SG     Y ++W QQ PG    
Sbjct: 7   ILLLVAAATGTHAEVQLVQSGAEVKKPGATVKISCKV-SGYTFTDYYMHWVQQAPGKGLE 65

Query: 67  YL-LRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCA 116
           ++ L    D +         R + + D ST+   + +S L+SED A YYCA
Sbjct: 66  WMGLVDPEDGETIYAEKFQGRVTITADTSTDTAYMELSSLRSEDTAVYYCA 116


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.129    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,493,269
Number of Sequences: 37866
Number of extensions: 293894
Number of successful extensions: 1160
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 942
Number of HSP's gapped (non-prelim): 193
length of query: 150
length of database: 18,247,518
effective HSP length: 93
effective length of query: 57
effective length of database: 14,725,980
effective search space: 839380860
effective search space used: 839380860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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