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Search of human proteins with 89062025
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens]
(150 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens] 313 5e-86
gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens] 313 5e-86
gi|9507239 immunoglobulin iota chain precursor [Homo sapiens] 144 4e-35
gi|239757666 PREDICTED: similar to hCG2040021 [Homo sapiens] 124 4e-29
gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo ... 123 7e-29
gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens] 116 8e-27
gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens] 101 2e-22
gi|7019567 pre-B lymphocyte 3 [Homo sapiens] 99 1e-21
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 74 5e-14
gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens] 73 8e-14
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] 70 5e-13
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ... 70 5e-13
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] 70 7e-13
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ... 70 7e-13
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens] 70 7e-13
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 67 4e-12
gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo... 67 6e-12
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 66 1e-11
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens] 66 1e-11
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens] 66 1e-11
gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo ... 65 2e-11
gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens] 64 4e-11
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 64 5e-11
gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens] 61 3e-10
gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo ... 61 3e-10
gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens] 59 2e-09
gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens] 59 2e-09
gi|239756211 PREDICTED: similar to pre-B lymphocyte gene 2 [Homo... 56 1e-08
gi|239750752 PREDICTED: hypothetical protein XP_002347494 [Homo ... 56 1e-08
gi|169217835 PREDICTED: similar to hCG2038921 [Homo sapiens] 55 2e-08
>gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens]
Length = 150
Score = 313 bits (801), Expect = 5e-86
Identities = 150/150 (100%), Positives = 150/150 (100%)
Query: 1 MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK
Sbjct: 1 MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
Query: 61 PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS
Sbjct: 61 PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
Query: 121 STSHSDTHTWGSGTKTSPCSHSCSVTIFKL 150
STSHSDTHTWGSGTKTSPCSHSCSVTIFKL
Sbjct: 121 STSHSDTHTWGSGTKTSPCSHSCSVTIFKL 150
>gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens]
Length = 150
Score = 313 bits (801), Expect = 5e-86
Identities = 150/150 (100%), Positives = 150/150 (100%)
Query: 1 MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK
Sbjct: 1 MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
Query: 61 PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS
Sbjct: 61 PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
Query: 121 STSHSDTHTWGSGTKTSPCSHSCSVTIFKL 150
STSHSDTHTWGSGTKTSPCSHSCSVTIFKL
Sbjct: 121 STSHSDTHTWGSGTKTSPCSHSCSVTIFKL 150
>gi|9507239 immunoglobulin iota chain precursor [Homo sapiens]
Length = 145
Score = 144 bits (362), Expect = 4e-35
Identities = 68/126 (53%), Positives = 87/126 (69%)
Query: 1 MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
M+W P+LL+ +CTG QPVL QP ++S++ G + R TCTLR+ ++G Y +YWYQQ+
Sbjct: 1 MSWAPVLLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQR 60
Query: 61 PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
PG PR+LLRY S SDK QG VP RFSGSKD + N G L IS LQ EDEA YYCA+
Sbjct: 61 PGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGAR 120
Query: 121 STSHSD 126
S+ +
Sbjct: 121 SSEKEE 126
>gi|239757666 PREDICTED: similar to hCG2040021 [Homo sapiens]
Length = 137
Score = 124 bits (310), Expect = 4e-29
Identities = 66/124 (53%), Positives = 83/124 (66%), Gaps = 9/124 (7%)
Query: 1 MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
MAWT LLL LSHCTGS++ VLTQP S+S +PG +AR TC G N+G+ ++WYQQK
Sbjct: 1 MAWTVLLLGLLSHCTGSVTSYVLTQPPSVSVAPGKTARITC---GGNNIGSKSVHWYQQK 57
Query: 61 PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
PG P +L DSD+ SG+P RFSGS S N L IS +++ DEADYYC +W S
Sbjct: 58 PGQAP--VLVVYDDSDRP--SGIPERFSGSN--SGNTATLTISRVEAGDEADYYCQVWDS 111
Query: 121 STSH 124
S+ H
Sbjct: 112 SSDH 115
>gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo
sapiens]
Length = 264
Score = 123 bits (308), Expect = 7e-29
Identities = 71/151 (47%), Positives = 92/151 (60%), Gaps = 10/151 (6%)
Query: 1 MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
MA PLLL L+HC GS +Q VLTQP S S +PG +C+ S N+G+ + WYQQ
Sbjct: 27 MASFPLLLTLLTHCAGSWAQSVLTQPPSASGTPGQRVTISCS-GSSSNIGSNTVNWYQQL 85
Query: 61 PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
PG+ P+ L+ S+ Q+ SGVP RFSGSK ++ + L ISGLQSEDEADYYCA W
Sbjct: 86 PGTAPKLLIY----SNNQRPSGVPDRFSGSKSGTSAS--LAISGLQSEDEADYYCAAWDD 139
Query: 121 STSHSDTHTWGSGTKTSPCSH---SCSVTIF 148
S + +G GTK + + SVT+F
Sbjct: 140 SLNGPTCWVFGGGTKLTVLGQPKAAPSVTLF 170
>gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens]
Length = 288
Score = 116 bits (290), Expect = 8e-27
Identities = 70/140 (50%), Positives = 87/140 (62%), Gaps = 9/140 (6%)
Query: 1 MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYR-IYWYQQ 59
MAW L L L+ TGS +Q LTQP S+S SPG S +CT S +VG Y + WYQQ
Sbjct: 1 MAWALLFLTLLTQGTGSWAQSALTQPASVSGSPGQSITISCTGTSS-DVGGYNYVSWYQQ 59
Query: 60 KPGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIW- 118
PG P+ ++ S+ + SGV +RFSGSK S N L ISGLQ+EDEADYYC+ +
Sbjct: 60 HPGKAPKLMIYDVSN----RPSGVSNRFSGSK--SGNTASLTISGLQAEDEADYYCSSYT 113
Query: 119 YSSTSHSDTHTWGSGTKTSP 138
SST HS +WG+ TKT P
Sbjct: 114 SSSTLHSGPSSWGTETKTCP 133
Score = 73.2 bits (178), Expect = 8e-14
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 13/113 (11%)
Query: 3 WTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
W PLL S GS++ LTQP ++S SPG +AR +C SG + WY QKPG
Sbjct: 185 WPPLL----SSPAGSVASYELTQPPAVSVSPGQTARISC---SGDVLRDNYADWYPQKPG 237
Query: 63 SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
P L+ YK D ++ SG+P RFSGS +T A L IS + ++ ADYYC
Sbjct: 238 QAP-VLVIYK---DGERPSGIPERFSGSTSGNTTA--LTISRVLTKGGADYYC 284
>gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens]
Length = 645
Score = 101 bits (252), Expect = 2e-22
Identities = 64/133 (48%), Positives = 79/133 (59%), Gaps = 12/133 (9%)
Query: 1 MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
MAW PLLL L CT S++ LTQP+S+S SPG +AR TC SG + W+QQK
Sbjct: 470 MAWIPLLLPLLILCTVSVASYELTQPSSVSVSPGQTARITC---SGDVLAKKYARWFQQK 526
Query: 61 PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
PG P L+ YK D ++ SG+P RFSGS +T L ISG Q EDEADYYC YS
Sbjct: 527 PGQAP-VLVIYK---DSERPSGIPERFSGSSSGTTVT--LTISGAQVEDEADYYC---YS 577
Query: 121 STSHSDTHTWGSG 133
+ ++ T T G
Sbjct: 578 AADNNLTVTQADG 590
Score = 43.5 bits (101), Expect = 7e-05
Identities = 34/112 (30%), Positives = 42/112 (37%), Gaps = 37/112 (33%)
Query: 17 SLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPRYLLRYKSDSD 76
S + LTQP S+ SPG S +CT S +VG Y
Sbjct: 359 SAPRSALTQPHSVPGSPGQSVTISCTGTSS-DVGHYNYV--------------------- 396
Query: 77 KQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSSTSHSDTH 128
S N + ISGLQ+EDEADYYC+ + SS H
Sbjct: 397 ---------------SCSGNMASMTISGLQAEDEADYYCSSYTSSNIFHSGH 433
>gi|7019567 pre-B lymphocyte 3 [Homo sapiens]
Length = 123
Score = 99.0 bits (245), Expect = 1e-21
Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 17 SLSQPVLTQPTSLSASPGASARFTCTLR-SGINVGTYRIYWYQQKPGSLPRYLLRYKSDS 75
S+SQ VL Q +L PG A+ +CTL + + Y + WYQQ+ GS PRYLL Y+S+
Sbjct: 16 SVSQTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEE 75
Query: 76 DKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWY 119
D + + +P RFS +KD + NA +L IS +Q ED+ADYYC++ Y
Sbjct: 76 DHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVGY 119
>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 151
Score = 73.9 bits (180), Expect = 5e-14
Identities = 54/133 (40%), Positives = 71/133 (53%), Gaps = 12/133 (9%)
Query: 6 LLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSL 64
LLLL+L TG + V+TQ P +LS SPG A +C R+ +V + + WYQQKPG
Sbjct: 10 LLLLWLPDTTGEI---VMTQSPATLSLSPGERATLSC--RASQSVSSSYLSWYQQKPGQA 64
Query: 65 PRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSSTSH 124
PR L+ S + +G+P+RFSGS S L IS LQ ED A YYC Y+
Sbjct: 65 PRLLIYGAS----TRATGIPARFSGS--GSGTDFTLTISSLQPEDFAVYYCQQDYNLPPT 118
Query: 125 SDTHTWGSGTKTS 137
H + T+ S
Sbjct: 119 VIQHETKTSTRPS 131
>gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens]
Length = 142
Score = 73.2 bits (178), Expect = 8e-14
Identities = 52/118 (44%), Positives = 64/118 (54%), Gaps = 15/118 (12%)
Query: 6 LLLLFL--SHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGS 63
LLLL+L + C ++Q P+SLSAS G TC GI+ + WYQQKPG
Sbjct: 21 LLLLWLPGTRCDIQMTQ----SPSSLSASVGDRVTITCRASQGISNS---LAWYQQKPGK 73
Query: 64 LPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSS 121
P+ LL S + SGVPSRFSGS + L IS LQ ED A YYC +YS+
Sbjct: 74 APKLLLYAASRLE----SGVPSRFSGSGSGTDYT--LTISSLQPEDFATYYCQQYYST 125
>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
Length = 152
Score = 70.5 bits (171), Expect = 5e-13
Identities = 53/117 (45%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
Query: 6 LLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSL 64
LLLL+L TG + VLTQ P +LS SPG A +C +V + + WYQQKPG
Sbjct: 10 LLLLWLPDTTGEI---VLTQSPATLSLSPGERATLSCGASQ--SVSSSYLAWYQQKPGLA 64
Query: 65 PRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSS 121
PR LL Y + S + +G+P RFSGS S L IS L+ ED A YYC + SS
Sbjct: 65 PR-LLIYDASS---RATGIPDRFSGS--GSGTDFTLTISRLEPEDFAVYYCQQYGSS 115
>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
sapiens]
Length = 152
Score = 70.5 bits (171), Expect = 5e-13
Identities = 53/117 (45%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
Query: 6 LLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSL 64
LLLL+L TG + VLTQ P +LS SPG A +C +V + + WYQQKPG
Sbjct: 10 LLLLWLPDTTGEI---VLTQSPATLSLSPGERATLSCGASQ--SVSSSYLAWYQQKPGLA 64
Query: 65 PRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSS 121
PR LL Y + S + +G+P RFSGS S L IS L+ ED A YYC + SS
Sbjct: 65 PR-LLIYDASS---RATGIPDRFSGS--GSGTDFTLTISRLEPEDFAVYYCQQYGSS 115
>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 70.1 bits (170), Expect = 7e-13
Identities = 51/116 (43%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 6 LLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLP 65
LLLL+L + V P+SLSAS G TC GI+ G + WYQQKPG P
Sbjct: 12 LLLLWLRGARCDIQ--VTQSPSSLSASVGDRVTITCRASQGISNG---LSWYQQKPGQAP 66
Query: 66 RYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSS 121
L+ S SGVPSRFSGS S L IS LQ ED A YYC Y++
Sbjct: 67 TLLIYAASSLQ----SGVPSRFSGS--GSGTDFTLTISSLQPEDVATYYCLQDYTT 116
>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
sapiens]
Length = 155
Score = 70.1 bits (170), Expect = 7e-13
Identities = 51/116 (43%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 6 LLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLP 65
LLLL+L + V P+SLSAS G TC GI+ G + WYQQKPG P
Sbjct: 12 LLLLWLRGARCDIQ--VTQSPSSLSASVGDRVTITCRASQGISNG---LSWYQQKPGQAP 66
Query: 66 RYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSS 121
L+ S SGVPSRFSGS S L IS LQ ED A YYC Y++
Sbjct: 67 TLLIYAASSLQ----SGVPSRFSGS--GSGTDFTLTISSLQPEDVATYYCLQDYTT 116
>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 70.1 bits (170), Expect = 7e-13
Identities = 51/116 (43%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 6 LLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLP 65
LLLL+L + V P+SLSAS G TC GI+ G + WYQQKPG P
Sbjct: 12 LLLLWLRGARCDIQ--VTQSPSSLSASVGDRVTITCRASQGISNG---LSWYQQKPGQAP 66
Query: 66 RYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSS 121
L+ S SGVPSRFSGS S L IS LQ ED A YYC Y++
Sbjct: 67 TLLIYAASSLQ----SGVPSRFSGS--GSGTDFTLTISSLQPEDVATYYCLQDYTT 116
>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 157
Score = 67.4 bits (163), Expect = 4e-12
Identities = 47/117 (40%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 22 VLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPRYLLRYKSDSDKQQG 80
V+TQ P +LS SPG A +C R+ +V + + WYQQKPG PR L+ S +
Sbjct: 28 VMTQSPATLSLSPGERATLSC--RASQSVSSSYLSWYQQKPGQAPRLLIYGAS----TRA 81
Query: 81 SGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSSTSHSDTHTWGSGTKTS 137
+G+P+RFSGS S L IS LQ ED A YYC Y+ H + T+ S
Sbjct: 82 TGIPARFSGS--GSGTDFTLTISSLQPEDFAVYYCQQDYNLPPTVIQHETKTSTRPS 136
>gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo
sapiens]
Length = 123
Score = 67.0 bits (162), Expect = 6e-12
Identities = 51/112 (45%), Positives = 60/112 (53%), Gaps = 15/112 (13%)
Query: 6 LLLLFL--SHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGS 63
LLLL+L + C L+Q P+ LSAS G TC GI+ +Y + WYQQKPG
Sbjct: 12 LLLLWLPGARCDIQLTQ----SPSFLSASVGDRVTITCRASQGIS--SY-LAWYQQKPGK 64
Query: 64 LPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
P+ L+ S SGVPSRFSGS S L IS LQ ED A YYC
Sbjct: 65 APKLLIYAASTLQ----SGVPSRFSGS--GSGTEFTLTISSLQPEDFATYYC 110
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 65.9 bits (159), Expect = 1e-11
Identities = 48/113 (42%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 4 TPLLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
T LL L + G+ +TQ P+SLSAS G TC GI+ + WYQQKPG
Sbjct: 178 TQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGIS---NNLNWYQQKPG 234
Query: 63 SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
P+ L+ S SG+PSRFS S S L IS LQ ED A YYC
Sbjct: 235 KTPKLLIYAASSLQ----SGIPSRFSDS--GSGTDYTLTISSLQPEDFATYYC 281
>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 65.9 bits (159), Expect = 1e-11
Identities = 48/113 (42%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 4 TPLLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
T LL L + G+ +TQ P+SLSAS G TC GI+ + WYQQKPG
Sbjct: 124 TQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGIS---NNLNWYQQKPG 180
Query: 63 SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
P+ L+ S SG+PSRFS S S L IS LQ ED A YYC
Sbjct: 181 KTPKLLIYAASSLQ----SGIPSRFSDS--GSGTDYTLTISSLQPEDFATYYC 227
>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 65.9 bits (159), Expect = 1e-11
Identities = 48/113 (42%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 4 TPLLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
T LL L + G+ +TQ P+SLSAS G TC GI+ + WYQQKPG
Sbjct: 124 TQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGIS---NNLNWYQQKPG 180
Query: 63 SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
P+ L+ S SG+PSRFS S S L IS LQ ED A YYC
Sbjct: 181 KTPKLLIYAASSLQ----SGIPSRFSDS--GSGTDYTLTISSLQPEDFATYYC 227
>gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo
sapiens]
Length = 162
Score = 65.1 bits (157), Expect = 2e-11
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
Query: 12 SHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPRYLLRY 71
+ C ++QP P+SLSAS G S TC T ++ WYQQKPG P+ LL Y
Sbjct: 70 ARCAIQMTQP----PSSLSASVGDSVTITCRASQSF---TNQLAWYQQKPGKAPK-LLIY 121
Query: 72 KSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
+ S + +GVPS FSGS+ + L IS LQ +D A YYC
Sbjct: 122 RVSSLQ---TGVPSLFSGSESGTDFT--LTISSLQPDDVATYYC 160
>gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 295
Score = 64.3 bits (155), Expect = 4e-11
Identities = 47/113 (41%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Query: 4 TPLLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
T LL L G+ +TQ P+SLSAS G TC GI+ + WYQQKPG
Sbjct: 177 TQLLGLLGLWLPGARCDIQMTQSPSSLSASVGGRVTITCRASQGIS---NNLNWYQQKPG 233
Query: 63 SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
P+ L+ S SG+PSRFS S + L IS LQ ED A YYC
Sbjct: 234 KTPKLLIYAASSLQ----SGIPSRFSDSGSGADYT--LTISSLQPEDFAAYYC 280
>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
sapiens]
Length = 636
Score = 63.9 bits (154), Expect = 5e-11
Identities = 46/113 (40%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Query: 4 TPLLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
T LL L + G+ +TQ P+SLSAS G TC GI+ + WYQQKPG
Sbjct: 518 TQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGIS---NNLNWYQQKPG 574
Query: 63 SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
P+ L+ S SG+PSRFS S + L I LQ ED A YYC
Sbjct: 575 KTPKLLIYAASSLQ----SGIPSRFSDSGSGADYT--LTIRSLQPEDFATYYC 621
>gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 276
Score = 61.2 bits (147), Expect = 3e-10
Identities = 40/90 (44%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 26 PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPRYLLRYKSDSDKQQGSGVPS 85
P+SLSAS G TC GI + + WYQQKP P+ L+ S SG+PS
Sbjct: 181 PSSLSASVGGRVTITCRASQGI---SNNLNWYQQKPRKTPKLLIYAASSLQ----SGIPS 233
Query: 86 RFSGSKDASTNAGLLLISGLQSEDEADYYC 115
RFS S S L IS LQ ED A YYC
Sbjct: 234 RFSDS--GSGTDYTLTISSLQPEDFATYYC 261
>gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo
sapiens]
Length = 761
Score = 61.2 bits (147), Expect = 3e-10
Identities = 40/90 (44%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 26 PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPRYLLRYKSDSDKQQGSGVPS 85
P+SLSAS G TC GI + + WYQQKP P+ L+ S SG+PS
Sbjct: 666 PSSLSASVGGRVTITCRASQGI---SNNLNWYQQKPRKTPKLLIYAASSLQ----SGIPS 718
Query: 86 RFSGSKDASTNAGLLLISGLQSEDEADYYC 115
RFS S S L IS LQ ED A YYC
Sbjct: 719 RFSDS--GSGTDYTLTISSLQPEDFATYYC 746
>gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 205
Score = 58.9 bits (141), Expect = 2e-09
Identities = 44/113 (38%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 4 TPLLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
T LL L + G +TQ P+SLSAS G TC GI + WYQ+KPG
Sbjct: 87 TQLLGLLVFWLPGVRCDIQMTQSPSSLSASVGDRVTITCRASQGI---INNLNWYQKKPG 143
Query: 63 SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
P+ L+ S SG+P+RFS S + IS LQ ED A YYC
Sbjct: 144 KTPKLLIYAASSLQ----SGIPTRFSDSGSGTDYTP--TISSLQPEDFATYYC 190
>gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 205
Score = 58.9 bits (141), Expect = 2e-09
Identities = 44/113 (38%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 4 TPLLLLFLSHCTGSLSQPVLTQ-PTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
T LL L + G +TQ P+SLSAS G TC GI + WYQ+KPG
Sbjct: 87 TQLLGLLVFWLPGVRCDIQMTQSPSSLSASVGDRVTITCRASQGI---INNLNWYQKKPG 143
Query: 63 SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYC 115
P+ L+ S SG+P+RFS S + IS LQ ED A YYC
Sbjct: 144 KTPKLLIYAASSLQ----SGIPTRFSDSGSGTDYTP--TISSLQPEDFATYYC 190
>gi|239756211 PREDICTED: similar to pre-B lymphocyte gene 2 [Homo
sapiens]
Length = 120
Score = 55.8 bits (133), Expect = 1e-08
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 1 MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
M WT +L ++ TG+ SQ L Q + PGAS + +C SG +Y I W +Q
Sbjct: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCK-ASGYTFTSYGISWVRQA 59
Query: 61 PG---SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCA 116
PG ++ Y +++ Q + R + + D ST+ + + L+S+D A YYCA
Sbjct: 60 PGQGLEWMGWISAYNGNTNYAQ--KLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCA 116
>gi|239750752 PREDICTED: hypothetical protein XP_002347494 [Homo
sapiens]
Length = 120
Score = 55.8 bits (133), Expect = 1e-08
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 1 MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
M WT +L ++ TG+ SQ L Q + PGAS + +C SG +Y I W +Q
Sbjct: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCK-ASGYTFTSYGISWVRQA 59
Query: 61 PG---SLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCA 116
PG ++ Y +++ Q + R + + D ST+ + + L+S+D A YYCA
Sbjct: 60 PGQGLEWMGWISAYNGNTNYAQ--KLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCA 116
>gi|169217835 PREDICTED: similar to hCG2038921 [Homo sapiens]
Length = 120
Score = 55.1 bits (131), Expect = 2e-08
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 7 LLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPR 66
+LL ++ TG+ ++ L Q + PGA+ + +C + SG Y ++W QQ PG
Sbjct: 7 ILLLVAAATGTHAEVQLVQSGAEVKKPGATVKISCKV-SGYTFTDYYMHWVQQAPGKGLE 65
Query: 67 YL-LRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCA 116
++ L D + R + + D ST+ + +S L+SED A YYCA
Sbjct: 66 WMGLVDPEDGETIYAEKFQGRVTITADTSTDTAYMELSSLRSEDTAVYYCA 116
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.129 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,493,269
Number of Sequences: 37866
Number of extensions: 293894
Number of successful extensions: 1160
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 942
Number of HSP's gapped (non-prelim): 193
length of query: 150
length of database: 18,247,518
effective HSP length: 93
effective length of query: 57
effective length of database: 14,725,980
effective search space: 839380860
effective search space used: 839380860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.