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Search of human proteins with 88853871
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|88853871 sprouty-related, EVH1 domain containing 3 isoform b
[Homo sapiens]
(152 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|88853871 sprouty-related, EVH1 domain containing 3 isoform b ... 314 2e-86
gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a... 289 6e-79
gi|189571671 sprouty-related protein with EVH-1 domain 2 isoform... 134 2e-32
gi|189571669 sprouty-related protein with EVH-1 domain 2 isoform... 134 2e-32
gi|22749221 sprouty-related protein 1 with EVH-1 domain [Homo sa... 129 1e-30
gi|56549694 enabled homolog isoform a [Homo sapiens] 63 8e-11
gi|39930375 enabled homolog isoform b [Homo sapiens] 63 8e-11
gi|7706687 Enah/Vasp-like [Homo sapiens] 63 8e-11
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 57 5e-09
gi|61966703 NHS-like 2 [Homo sapiens] 35 0.025
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 33 0.12
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 33 0.12
gi|5453690 DnaJ (Hsp40) homolog, subfamily B, member 1 [Homo sap... 33 0.12
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 32 0.27
gi|30425444 ankyrin repeat and kinase domain containing 1 [Homo ... 30 0.79
gi|28373194 adhesion regulating molecule 1 precursor [Homo sapiens] 30 0.79
gi|28373192 adhesion regulating molecule 1 precursor [Homo sapiens] 30 0.79
gi|112363080 microtubule associated serine/threonine kinase 2 [H... 30 1.0
gi|13677214 receptor-type protein tyrosine phosphatase O isoform... 29 1.4
gi|4506323 receptor-type protein tyrosine phosphatase O isoform ... 29 1.4
gi|164419758 bromodomain containing 2 [Homo sapiens] 29 1.4
gi|4826806 bromodomain containing 2 [Homo sapiens] 29 1.4
gi|239755656 PREDICTED: hypothetical protein [Homo sapiens] 29 1.8
gi|239750182 PREDICTED: hypothetical protein [Homo sapiens] 29 1.8
gi|239744491 PREDICTED: hypothetical protein XP_002343164 [Homo ... 29 1.8
gi|45120119 microtubule associated serine/threonine kinase 1 [Ho... 28 2.3
gi|91208420 bassoon protein [Homo sapiens] 28 3.0
gi|119395716 forkhead box C1 [Homo sapiens] 28 3.0
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 28 3.0
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 28 3.0
>gi|88853871 sprouty-related, EVH1 domain containing 3 isoform b
[Homo sapiens]
Length = 152
Score = 314 bits (804), Expect = 2e-86
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MVRVRAVVMARDDSSGGWLPVGGGGLSQVSVCRVRGARPEGGARQGHYVIHGERLRDQKT 60
MVRVRAVVMARDDSSGGWLPVGGGGLSQVSVCRVRGARPEGGARQGHYVIHGERLRDQKT
Sbjct: 1 MVRVRAVVMARDDSSGGWLPVGGGGLSQVSVCRVRGARPEGGARQGHYVIHGERLRDQKT 60
Query: 61 TLECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALGRGSLTP 120
TLECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALGRGSLTP
Sbjct: 61 TLECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALGRGSLTP 120
Query: 121 SSSSSSSSPSQDTAETPCPLTLSQYFRHMLCP 152
SSSSSSSSPSQDTAETPCPLTLSQYFRHMLCP
Sbjct: 121 SSSSSSSSPSQDTAETPCPLTLSQYFRHMLCP 152
>gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a
[Homo sapiens]
Length = 410
Score = 289 bits (740), Expect = 6e-79
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MVRVRAVVMARDDSSGGWLPVGGGGLSQVSVCRVRGARPEGGARQGHYVIHGERLRDQKT 60
MVRVRAVVMARDDSSGGWLPVGGGGLSQVSVCRVRGARPEGGARQGHYVIHGERLRDQKT
Sbjct: 1 MVRVRAVVMARDDSSGGWLPVGGGGLSQVSVCRVRGARPEGGARQGHYVIHGERLRDQKT 60
Query: 61 TLECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALGRGSLTP 120
TLECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALGRGSLTP
Sbjct: 61 TLECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALGRGSLTP 120
Query: 121 SSSSSSSSPSQDTAETPCPLT 141
SSSSSSSSPSQDTAETPCPLT
Sbjct: 121 SSSSSSSSPSQDTAETPCPLT 141
>gi|189571671 sprouty-related protein with EVH-1 domain 2 isoform b
[Homo sapiens]
Length = 415
Score = 134 bits (338), Expect = 2e-32
Identities = 67/123 (54%), Positives = 85/123 (69%), Gaps = 3/123 (2%)
Query: 1 MVRVRAVVMARDDSSGGWLPVGGGGLSQVSVCRVRGARPEGGARQGHYVIHGERLRDQKT 60
+VRV+AVVM RDDSSGGW P GGG+S+V VC+V PEG R G ++IHGER +D+
Sbjct: 10 IVRVKAVVMTRDDSSGGWFPQEGGGISRVGVCKVM--HPEGNGRSG-FLIHGERQKDKLV 66
Query: 61 TLECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALGRGSLTP 120
LEC ++ LVY K NP FHHW + + KFGLTFQSPA+A F + + A+ L GS T
Sbjct: 67 VLECYVRKDLVYTKANPTFHHWKVDNRKFGLTFQSPADARAFDRGVRKAIEDLIEGSTTS 126
Query: 121 SSS 123
SS+
Sbjct: 127 SST 129
>gi|189571669 sprouty-related protein with EVH-1 domain 2 isoform a
[Homo sapiens]
Length = 418
Score = 134 bits (338), Expect = 2e-32
Identities = 67/123 (54%), Positives = 85/123 (69%), Gaps = 3/123 (2%)
Query: 1 MVRVRAVVMARDDSSGGWLPVGGGGLSQVSVCRVRGARPEGGARQGHYVIHGERLRDQKT 60
+VRV+AVVM RDDSSGGW P GGG+S+V VC+V PEG R G ++IHGER +D+
Sbjct: 13 IVRVKAVVMTRDDSSGGWFPQEGGGISRVGVCKVM--HPEGNGRSG-FLIHGERQKDKLV 69
Query: 61 TLECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALGRGSLTP 120
LEC ++ LVY K NP FHHW + + KFGLTFQSPA+A F + + A+ L GS T
Sbjct: 70 VLECYVRKDLVYTKANPTFHHWKVDNRKFGLTFQSPADARAFDRGVRKAIEDLIEGSTTS 129
Query: 121 SSS 123
SS+
Sbjct: 130 SST 132
>gi|22749221 sprouty-related protein 1 with EVH-1 domain [Homo
sapiens]
Length = 444
Score = 129 bits (324), Expect = 1e-30
Identities = 66/133 (49%), Positives = 82/133 (61%), Gaps = 3/133 (2%)
Query: 3 RVRAVVMARDDSSGGWLPVGGGGLSQVSVCRVRGARPEGGARQGHYVIHGERLRDQKTTL 62
RVRAVVM RDDSSGGWLP+GG GLS V+V +V G A + I GERLRD+ L
Sbjct: 16 RVRAVVMTRDDSSGGWLPLGGSGLSSVTVFKVPHQEENGCA---DFFIRGERLRDKMVVL 72
Query: 63 ECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALGRGSLTPSS 122
EC LK L+YNKV P FHHW + D KFGLTFQSPA+A F + + A+ + +G +
Sbjct: 73 ECMLKKDLIYNKVTPTFHHWKIDDKKFGLTFQSPADARAFDRGIRRAIEDISQGCPESKN 132
Query: 123 SSSSSSPSQDTAE 135
+ + Q E
Sbjct: 133 EAEGADDLQANEE 145
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 63.2 bits (152), Expect = 8e-11
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 17/142 (11%)
Query: 3 RVRAVVMARDDSSGGWLPVGGG-GLSQVSVCRVRGARPEGGARQGHYVIHGERLRDQKTT 61
+ RA VM DD++ W+P GG G S+V + G + + G +++D +
Sbjct: 8 QARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTG--------NNTFRVVGRKIQDHQVV 59
Query: 62 LECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALG---RGSL 118
+ C + GL YN+ FH W +GL F S +A+ F +++ AL L G
Sbjct: 60 INCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQETGPT 119
Query: 119 TPSSSSS-----SSSPSQDTAE 135
P +S + PSQ+ E
Sbjct: 120 LPRQNSQLPAQVQNGPSQEELE 141
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 63.2 bits (152), Expect = 8e-11
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 17/142 (11%)
Query: 3 RVRAVVMARDDSSGGWLPVGGG-GLSQVSVCRVRGARPEGGARQGHYVIHGERLRDQKTT 61
+ RA VM DD++ W+P GG G S+V + G + + G +++D +
Sbjct: 8 QARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTG--------NNTFRVVGRKIQDHQVV 59
Query: 62 LECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALG---RGSL 118
+ C + GL YN+ FH W +GL F S +A+ F +++ AL L G
Sbjct: 60 INCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQETGPT 119
Query: 119 TPSSSSS-----SSSPSQDTAE 135
P +S + PSQ+ E
Sbjct: 120 LPRQNSQLPAQVQNGPSQEELE 141
>gi|7706687 Enah/Vasp-like [Homo sapiens]
Length = 418
Score = 63.2 bits (152), Expect = 8e-11
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 3 RVRAVVMARDDSSGGWLPVGGG--GLSQVSVCRVRGARPEGGARQGHYVIHGERLRDQKT 60
+ RA VM DD+S W+P+ G G S++++ + + G +L+DQ+
Sbjct: 10 QARASVMVYDDTSKKWVPIKPGQQGFSRINIYH--------NTASNTFRVVGVKLQDQQV 61
Query: 61 TLECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALGRGSLTP 120
+ ++ GL YN+ P FH W +GL F S EA F ++L AL + P
Sbjct: 62 VINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFALNIMNSQEGGP 121
Query: 121 SSSSS-SSSPSQD 132
SS + PS D
Sbjct: 122 SSQRQVQNGPSPD 134
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 57.4 bits (137), Expect = 5e-09
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 5 RAVVMARDDSSGGWLPVGGG--GLSQVSVCRVRGARPEGGARQGHYVIHGERLR-DQKTT 61
RA VM DD + WLP G G S+V + A + + G +++ DQ+
Sbjct: 10 RATVMLYDDGNKRWLPAGTGPQAFSRVQIYHNPTANS--------FRVVGRKMQPDQQVV 61
Query: 62 LECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAAL-GRGSLTP 120
+ C + G+ YN+ P FH W +GL F S +A +F + +AL AL G G P
Sbjct: 62 INCAIVRGVKYNQATPNFHQWRDARQVWGLNFGSKEDAAQFAAGMASALEALEGGGPPPP 121
Query: 121 SSSSSSSSPSQDTAE 135
+ + S P+ + E
Sbjct: 122 PALPTWSVPNGPSPE 136
>gi|61966703 NHS-like 2 [Homo sapiens]
Length = 709
Score = 35.0 bits (79), Expect = 0.025
Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 32/155 (20%)
Query: 5 RAVVMARDDSSGGWLPVGGGGLSQ----VSVC---RVRGARPEGGARQGHYVIHGERLRD 57
R+V + +D+ G LP GG L + S+C +G QGH I + D
Sbjct: 207 RSVSLVKDEP--GLLPEGGSALPKDQRPKSLCLSLEHQGHHSSHPDAQGHPAIPNHK--D 262
Query: 58 QKTTLECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALGRGS 117
++T HHW L D K G T+QS S A + +
Sbjct: 263 PEST---------------QFSHHWYLTDWKSGDTYQS------LSSSSTATGTTVIECT 301
Query: 118 LTPSSSSSSSSPSQDTAETPCPLTLSQYFRHMLCP 152
SS S +SPS A TP L++ R + P
Sbjct: 302 QVQGSSESLASPSTSRATTPSQLSIEVEAREISSP 336
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 32.7 bits (73), Expect = 0.12
Identities = 20/59 (33%), Positives = 27/59 (45%)
Query: 45 QGHYVIHGERLRDQKTTLECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQ 103
Q Y I L+ + E L LVY+ P FH ++ DC+ GL F EA F+
Sbjct: 80 QKSYFIRLYGLQAGRLLWEQELYSQLVYSTPTPFFHTFAGDDCQAGLNFADEDEAQAFR 138
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 32.7 bits (73), Expect = 0.12
Identities = 21/73 (28%), Positives = 32/73 (43%)
Query: 45 QGHYVIHGERLRDQKTTLECTLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQK 104
Q Y + ++D K E L VYN FH ++ C+ L F + EA +F+K
Sbjct: 73 QRSYFLRIFDIKDGKLLWEQELYNNFVYNSPRGYFHTFAGDTCQVALNFANEEEAKKFRK 132
Query: 105 SLLAALAALGRGS 117
++ L R S
Sbjct: 133 AVTDLLGRRQRKS 145
>gi|5453690 DnaJ (Hsp40) homolog, subfamily B, member 1 [Homo
sapiens]
Length = 340
Score = 32.7 bits (73), Expect = 0.12
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 12 DDSSGGWLPVGGGGLSQVSVCRVRGARPEGGARQGHYVIHGERLRDQKTTLECTLKPGLV 71
DD G+ P+G GG + V+ R R A+ +Q V H R+ ++ CT K +
Sbjct: 128 DDPFSGF-PMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKIS 186
Query: 72 YNKVNP 77
+ ++NP
Sbjct: 187 HKRLNP 192
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 31.6 bits (70), Expect = 0.27
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 91 LTFQSPAEADEFQKSLLAALAALGRGSLTPSSSSSSSSPSQDTAET 136
LTF +P E +F++ LL A R T SSSSSSSS S ++ +
Sbjct: 122 LTFNNPTE--DFRRKLLKAGGDPNRSIHTSSSSSSSSSSSSSSSSS 165
>gi|30425444 ankyrin repeat and kinase domain containing 1 [Homo
sapiens]
Length = 765
Score = 30.0 bits (66), Expect = 0.79
Identities = 16/33 (48%), Positives = 16/33 (48%)
Query: 8 VMARDDSSGGWLPVGGGGLSQVSVCRVRGARPE 40
V RDD G W V GG SQV R R R E
Sbjct: 15 VFTRDDFEGDWRLVASGGFSQVFQARHRRWRTE 47
>gi|28373194 adhesion regulating molecule 1 precursor [Homo sapiens]
Length = 407
Score = 30.0 bits (66), Expect = 0.79
Identities = 19/34 (55%), Positives = 20/34 (58%)
Query: 110 LAALGRGSLTPSSSSSSSSPSQDTAETPCPLTLS 143
LA+L S P SSSSSSS SQ A TP T S
Sbjct: 191 LASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSS 224
>gi|28373192 adhesion regulating molecule 1 precursor [Homo sapiens]
Length = 407
Score = 30.0 bits (66), Expect = 0.79
Identities = 19/34 (55%), Positives = 20/34 (58%)
Query: 110 LAALGRGSLTPSSSSSSSSPSQDTAETPCPLTLS 143
LA+L S P SSSSSSS SQ A TP T S
Sbjct: 191 LASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSS 224
>gi|112363080 microtubule associated serine/threonine kinase 2 [Homo
sapiens]
Length = 1798
Score = 29.6 bits (65), Expect = 1.0
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 96 PAEADEFQKSLLAALAALGRGSLTPSSSSSSSSPSQD 132
PA + ++ LA+L + G G+ TPSS+ SSS SQ+
Sbjct: 220 PARRTDGRRWSLASLPSSGYGTNTPSSTVSSSCSSQE 256
>gi|13677214 receptor-type protein tyrosine phosphatase O isoform a
precursor [Homo sapiens]
Length = 1216
Score = 29.3 bits (64), Expect = 1.4
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 74 KVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALGRGSLTPSSSSSSSSPSQD 132
K +F+HW G C +TFQ +EA F KS L + + S P ++ P Q+
Sbjct: 173 KGKTVFNHWLPGMCYSNITFQLVSEA-TFNKSTLVEYSGV---SHEPKQHRTAPYPPQN 227
>gi|4506323 receptor-type protein tyrosine phosphatase O isoform b
precursor [Homo sapiens]
Length = 1188
Score = 29.3 bits (64), Expect = 1.4
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 74 KVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALGRGSLTPSSSSSSSSPSQD 132
K +F+HW G C +TFQ +EA F KS L + + S P ++ P Q+
Sbjct: 173 KGKTVFNHWLPGMCYSNITFQLVSEA-TFNKSTLVEYSGV---SHEPKQHRTAPYPPQN 227
>gi|164419758 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 29.3 bits (64), Expect = 1.4
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 92 TFQSPAEADEFQKSLLAALAALGR----GSLTPSSSSSSSSPSQDTAET 136
T + P +A+E +S A A+ R S + SSSSSSSS S DT+++
Sbjct: 750 TKKPPKKANEKTESSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDS 798
>gi|4826806 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 29.3 bits (64), Expect = 1.4
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 92 TFQSPAEADEFQKSLLAALAALGR----GSLTPSSSSSSSSPSQDTAET 136
T + P +A+E +S A A+ R S + SSSSSSSS S DT+++
Sbjct: 750 TKKPPKKANEKTESSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDS 798
>gi|239755656 PREDICTED: hypothetical protein [Homo sapiens]
Length = 522
Score = 28.9 bits (63), Expect = 1.8
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 82 WSLGDCKFGLTFQSPAEADE----FQKSLLAALAALGRGSLTPSSSSSSSS 128
W GDC GL Q A +E F ++L + +AL R S P+SS SSS+
Sbjct: 222 WEPGDCVTGL--QQHAAGNEVGHTFLLAMLRSSSALLRSSPWPASSRSSST 270
>gi|239750182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 522
Score = 28.9 bits (63), Expect = 1.8
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 82 WSLGDCKFGLTFQSPAEADE----FQKSLLAALAALGRGSLTPSSSSSSSS 128
W GDC GL Q A +E F ++L + +AL R S P+SS SSS+
Sbjct: 222 WEPGDCVTGL--QQHAAGNEVGHTFLLAMLRSSSALLRSSPWPASSRSSST 270
>gi|239744491 PREDICTED: hypothetical protein XP_002343164 [Homo
sapiens]
Length = 471
Score = 28.9 bits (63), Expect = 1.8
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 82 WSLGDCKFGLTFQSPAEADE----FQKSLLAALAALGRGSLTPSSSSSSSS 128
W GDC GL Q A +E F ++L + +AL R S P+SS SSS+
Sbjct: 222 WEPGDCVTGL--QQHAAGNEVGHTFLLAMLRSSSALLRSSPWPASSRSSST 270
>gi|45120119 microtubule associated serine/threonine kinase 1 [Homo
sapiens]
Length = 1570
Score = 28.5 bits (62), Expect = 2.3
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 92 TFQSPAEADEFQKSLLAALAALGRGSLTPSSSSSSSSPSQD 132
+F S AD + SL A+L + G G+ TPSS+ SSS SQ+
Sbjct: 77 SFASSRRADGRRWSL-ASLPSSGYGTNTPSSTVSSSCSSQE 116
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 28.1 bits (61), Expect = 3.0
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 91 LTFQSPAEADEFQKSLLAALAALGRGSLTPSSSSSSSSPSQDTAETPCPL 140
L+ SP+E+ F + A + TPS + +S P A TP P+
Sbjct: 1480 LSPSSPSESPTFSPGKMGPRATAEFSTQTPSPAPASDMPRSPGAPTPSPM 1529
>gi|119395716 forkhead box C1 [Homo sapiens]
Length = 553
Score = 28.1 bits (61), Expect = 3.0
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 80 HH---WSLGDCKFGLTFQSPAEADEFQKSLLAALAALGRGSLTPSSSSSSSSPSQDTA-E 135
HH +S+ + L + A E LLA+ AA R + P + + SP Q +
Sbjct: 303 HHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSLYS 362
Query: 136 TPCPLTLS 143
+PC T S
Sbjct: 363 SPCSQTSS 370
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 28.1 bits (61), Expect = 3.0
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 94 QSPAEADEFQKSLLAALAALGR---GSLTPSSSSSSSSPSQDTAETP 137
QSP + +EFQ SL + ++ SL S SS SP + ++P
Sbjct: 613 QSPLQGEEFQSSLQSPVSICSSSTPSSLPQSFPESSQSPPEGPVQSP 659
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 28.1 bits (61), Expect = 3.0
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 7/48 (14%)
Query: 107 LAALAALGRGSLTPSSSSSSSSPSQDTAE------TPCPL-TLSQYFR 147
LA+L + G G+ TPSS+ SSSS S++ TP L LS++FR
Sbjct: 86 LASLPSSGYGTNTPSSTLSSSSSSRERLHQLPFQPTPDELHFLSKHFR 133
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,478,009
Number of Sequences: 37866
Number of extensions: 302181
Number of successful extensions: 2090
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1952
Number of HSP's gapped (non-prelim): 147
length of query: 152
length of database: 18,247,518
effective HSP length: 93
effective length of query: 59
effective length of database: 14,725,980
effective search space: 868832820
effective search space used: 868832820
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.