Search of human proteins with 85790495

Search of human proteins with 85790495

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|85790495 glucosaminyl (N-acetyl) transferase 2, I-branching
enzyme isoform C [Homo sapiens]
         (402 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|85790495 glucosaminyl (N-acetyl) transferase 2, I-branching e...   844   0.0  
gi|21717810 glucosaminyl (N-acetyl) transferase 2, I-branching e...   619   e-177
gi|4503963 glucosaminyl (N-acetyl) transferase 2, I-branching en...   606   e-173
gi|190684701 glucosaminyl (N-acetyl) transferase family member 7...   397   e-111
gi|4758422 glucosaminyl (N-acetyl) transferase 3, mucin type [Ho...   303   1e-82
gi|239754233 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H...   298   4e-81
gi|239748765 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H...   298   4e-81
gi|239742810 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H...   298   4e-81
gi|7706127 core 2 beta-1,6-N-acetylglucosaminyltransferase 3 [Ho...   284   9e-77
gi|148277035 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...   278   6e-75
gi|148277033 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...   278   6e-75
gi|148277031 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...   278   6e-75
gi|148277029 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...   278   6e-75
gi|21614523 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6...   278   6e-75
gi|110611246 xylosyltransferase II [Homo sapiens]                      84   2e-16
gi|28269693 xylosyltransferase I [Homo sapiens]                        79   9e-15
gi|34878904 synaptonemal complex protein 1 [Homo sapiens]              32   0.78 
gi|157388921 transmembrane and coiled-coil domains 3 [Homo sapiens]    31   1.7  
gi|40018629 hypothetical protein LOC23325 [Homo sapiens]               29   8.6  

>gi|85790495 glucosaminyl (N-acetyl) transferase 2, I-branching
           enzyme isoform C [Homo sapiens]
          Length = 402

 Score =  844 bits (2181), Expect = 0.0
 Identities = 402/402 (100%), Positives = 402/402 (100%)

Query: 1   MNFWRYCFFAFTLLSVVIFVRFYSSQLSPPKSYEKLNSSSERYFRKTACNHALEKMPVFL 60
           MNFWRYCFFAFTLLSVVIFVRFYSSQLSPPKSYEKLNSSSERYFRKTACNHALEKMPVFL
Sbjct: 1   MNFWRYCFFAFTLLSVVIFVRFYSSQLSPPKSYEKLNSSSERYFRKTACNHALEKMPVFL 60

Query: 61  WENILPSPLRSVPCKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYMP 120
           WENILPSPLRSVPCKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYMP
Sbjct: 61  WENILPSPLRSVPCKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYMP 120

Query: 121 QNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVAS 180
           QNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVAS
Sbjct: 121 QNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVAS 180

Query: 181 EVPWKYVINTCGQDFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDKG 240
           EVPWKYVINTCGQDFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDKG
Sbjct: 181 EVPWKYVINTCGQDFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDKG 240

Query: 241 GFFVKNTNILKTSPPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEHF 300
           GFFVKNTNILKTSPPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEHF
Sbjct: 241 GFFVKNTNILKTSPPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEHF 300

Query: 301 WVTLNRVSGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNS 360
           WVTLNRVSGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNS
Sbjct: 301 WVTLNRVSGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNS 360

Query: 361 PSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF 402
           PSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
Sbjct: 361 PSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF 402


>gi|21717810 glucosaminyl (N-acetyl) transferase 2, I-branching
           enzyme isoform A [Homo sapiens]
          Length = 402

 Score =  619 bits (1595), Expect = e-177
 Identities = 294/402 (73%), Positives = 332/402 (82%), Gaps = 1/402 (0%)

Query: 1   MNFWRYCFFAFTLLSVVIFVRFYSSQLSPPKSYEKLNSSSERYFRKTACNHALEKMPVFL 60
           M  W++C F+ +L+S +IFV  Y+++L   K + +   S+     + AC+   E    + 
Sbjct: 2   MGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAE-ACHQIFEGKVFYP 60

Query: 61  WENILPSPLRSVPCKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYMP 120
            EN L + L    C +Y+ ++HY+T  LSEEEA FPLAY + IHKDF TFERLFRAIYMP
Sbjct: 61  TENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFGTFERLFRAIYMP 120

Query: 121 QNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVAS 180
           QNVYCVH+D+KA   +K +V+QLLSCF NAF+ASK ESVVY GISRLQADLNCL+DLVAS
Sbjct: 121 QNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVAS 180

Query: 181 EVPWKYVINTCGQDFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDKG 240
           EVPWKYVINTCGQDFPLKTNREIVQ+LKGFKGKNITPGVLPPDHA+ RTKYVHQE  +  
Sbjct: 181 EVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNHK 240

Query: 241 GFFVKNTNILKTSPPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEHF 300
             +V  T  LKT PPH + IYFGTAYVALTRDF +FVL+DQ A+DLL WSKDTYSPDEHF
Sbjct: 241 NSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLSWSKDTYSPDEHF 300

Query: 301 WVTLNRVSGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNS 360
           WVTLNR+ GVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNS
Sbjct: 301 WVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNS 360

Query: 361 PSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF 402
           PSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
Sbjct: 361 PSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF 402


>gi|4503963 glucosaminyl (N-acetyl) transferase 2, I-branching
           enzyme isoform B [Homo sapiens]
          Length = 400

 Score =  606 bits (1563), Expect = e-173
 Identities = 292/394 (74%), Positives = 325/394 (82%), Gaps = 2/394 (0%)

Query: 9   FAFTLLSVVIFVRFYSSQLSPPKSYEKLNSSSERYFRKTACNHALEKMPVFLWENILPSP 68
           F  ++ SV+IF+ F         S+++LN S      +  C   +     FLW+N L   
Sbjct: 9   FIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRLTQV-CTSFINGKTRFLWKNKLMIH 67

Query: 69  LRSVPCKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYMPQNVYCVHV 128
            +S  CK+YLTQ+HYIT+PLS+EEA FPLAY+MVIH  FDTF RLFRAIYMPQN+YCVHV
Sbjct: 68  EKS-SCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMPQNIYCVHV 126

Query: 129 DEKAPAEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVASEVPWKYVI 188
           DEKA  E+K++V QLLSCF NAF+ASK E VVY GISRLQADLNC++DL A EV WKYVI
Sbjct: 127 DEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAFEVSWKYVI 186

Query: 189 NTCGQDFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDKGGFFVKNTN 248
           NTCGQDFPLKTN+EIVQ+LKGFKGKNITPGVLPP HAI RTKYVHQEH  K   +V  T 
Sbjct: 187 NTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKELSYVIRTT 246

Query: 249 ILKTSPPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEHFWVTLNRVS 308
            LK  PPH LTIYFG+AYVAL+R+F +FVL D RA+DLLQWSKDT+SPDEHFWVTLNR+ 
Sbjct: 247 ALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHFWVTLNRIP 306

Query: 309 GVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKF 368
           GVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKF
Sbjct: 307 GVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKF 366

Query: 369 ELNTYPLTVECLELRHRERTLNQSETAIQPSWYF 402
           ELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
Sbjct: 367 ELNTYPLTVECLELRHRERTLNQSETAIQPSWYF 400


>gi|190684701 glucosaminyl (N-acetyl) transferase family member 7
           [Homo sapiens]
          Length = 430

 Score =  397 bits (1021), Expect = e-111
 Identities = 186/323 (57%), Positives = 230/323 (71%), Gaps = 2/323 (0%)

Query: 82  HYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYMPQNVYCVHVDEKAPAEYKESVR 141
           H+IT PLS EE  F LAY++ IHK+   F +L RAIY+PQNVYC+HVDEKAP +YK +V+
Sbjct: 96  HFITRPLSAEEGDFSLAYIITIHKELAMFVQLLRAIYVPQNVYCIHVDEKAPMKYKTAVQ 155

Query: 142 QLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVASEVPWKYVINTCGQDFPLKTNR 201
            L++CF+N FI+SKTE V YAG +RLQAD+NC+K LV S+  W YVIN CGQDFP+KTNR
Sbjct: 156 TLVNCFENVFISSKTEKVAYAGFTRLQADINCMKVLVHSKFQWNYVINLCGQDFPIKTNR 215

Query: 202 EIVQHLKG-FKGKNITPGVLPPDHAIKRTKYVHQEHTDKGGFFVKNTNILKTSPPHQLTI 260
           EI+ +++  +  KNITPGV+ P H   +T   H E   KG  +    N  K  PPH LTI
Sbjct: 216 EIIHYIRSKWSDKNITPGVIQPLHIKSKTSQSHLEFVPKGSIYAPPNNRFKDKPPHNLTI 275

Query: 261 YFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEHFWVTLNRVSGVPGSMPNASWT 320
           YFG+AY  LTR FV+F+L D  A D+LQWSKD  SP++H+WVTLNR+   PG+ PNA W 
Sbjct: 276 YFGSAYYVLTRKFVEFILTDIHAKDMLQWSKDIRSPEQHYWVTLNRLKDAPGATPNAGWE 335

Query: 321 GNLRAIKWSDMEDR-HGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVEC 379
           GN+RAIK    E   H GC G YV  IC+YG GDL WL+ SPSLFANKFE +T PL V C
Sbjct: 336 GNVRAIKRKSEEGNVHDGCKGRYVEDICVYGPGDLPWLIQSPSLFANKFEPSTDPLVVTC 395

Query: 380 LELRHRERTLNQSETAIQPSWYF 402
           LE RHR + L Q+E  I+P W+F
Sbjct: 396 LERRHRLQVLRQAEVPIEPHWHF 418


>gi|4758422 glucosaminyl (N-acetyl) transferase 3, mucin type [Homo
           sapiens]
          Length = 438

 Score =  303 bits (777), Expect = 1e-82
 Identities = 150/332 (45%), Positives = 205/332 (61%), Gaps = 16/332 (4%)

Query: 74  CKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYMPQNVYCVHVDEKAP 133
           C+ +  +  +I  PLS+EE  FP+AY MVIH+  + FERL RA+Y PQN+YCVHVDEK+P
Sbjct: 110 CEHFKAERKFIQFPLSKEEVEFPIAYSMVIHEKIENFERLLRAVYAPQNIYCVHVDEKSP 169

Query: 134 AEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVASEVPWKYVINTCGQ 193
             +KE+V+ ++SCF N FIASK   VVYA  SR+QADLNC++DL+ S VPWKY +NTCG 
Sbjct: 170 ETFKEAVKAIISCFPNVFIASKLVRVVYASWSRVQADLNCMEDLLQSSVPWKYFLNTCGT 229

Query: 194 DFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDKGGFFVKNTNILKTS 253
           DFP+K+N E+VQ LK   G+N     +PP H   R KY  +   D     +  TN  K  
Sbjct: 230 DFPIKSNAEMVQALKMLNGRNSMESEVPPKHKETRWKYHFEVVRDT----LHLTNKKKDP 285

Query: 254 PPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEHFWVTLNRVSGVPGS 313
           PP+ LT++ G AY+  +RDFV  VL++ ++  L++W KDTYSPDEH W TL R   +PGS
Sbjct: 286 PPYNLTMFTGNAYIVASRDFVQHVLKNPKSQQLIEWVKDTYSPDEHLWATLQRARWMPGS 345

Query: 314 MPN------ASWTGNLRAIKWS------DMEDRHGGCHGHYVHGICIYGNGDLKWLVNSP 361
           +PN      +  T   R +KW       D    +  C G +   IC+YG GDL W++ + 
Sbjct: 346 VPNHPKYDISDMTSIARLVKWQGHEGDIDKGAPYAPCSGIHQRAICVYGAGDLNWMLQNH 405

Query: 362 SLFANKFELNTYPLTVECLELRHRERTLNQSE 393
            L ANKF+       ++CLE   R + +  +E
Sbjct: 406 HLLANKFDPKVDDNALQCLEEYLRYKAIYGTE 437


>gi|239754233 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
           sapiens]
          Length = 391

 Score =  298 bits (764), Expect = 4e-81
 Identities = 162/341 (47%), Positives = 218/341 (63%), Gaps = 17/341 (4%)

Query: 1   MNFWRYCFFAFTLLSVVIFVRFYSSQLSPPKS--YEKLNSSSERYFRKTACNHALEKMPV 58
           M  W       TL  ++I    Y+  +S P S   + +    +   R   C+ AL    V
Sbjct: 1   MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60

Query: 59  FLWENILPSPLRSV----PCKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLF 114
                +LPS L ++     C  Y+ +NHYIT+PLS EEAAFPLAYVM I +DFDTFE LF
Sbjct: 61  ----QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLF 116

Query: 115 RAIYMPQNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCL 174
            AIYMPQNVYC+HVD+ A  ++K +V +LL CF NAFI+S++E ++Y G SRLQADL C+
Sbjct: 117 WAIYMPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACM 176

Query: 175 KDLVASEVPWKYVINTCGQDFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQ 234
           +DL+AS V W+YV NT   DFPLKTNREIVQ+LK     NITP ++    + +R KY H+
Sbjct: 177 RDLIASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHR 236

Query: 235 EHTDKGGFFVKNTNILKTSPPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTY 294
           E+  +   FV   +  K+ PP QL I+FG++YVALTR+FV F L ++ AI+LLQ S+DTY
Sbjct: 237 EYRTRAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTY 296

Query: 295 SPDEHFWVTLNRVSGVPGSMPNASWTGNLRAIKWSDMEDRH 335
           SPD+HFW+TLN +  V G+ P   W   + A+     ++RH
Sbjct: 297 SPDKHFWITLNNIP-VEGTGP---W---ILAVNSGSCQNRH 330


>gi|239748765 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
           sapiens]
          Length = 391

 Score =  298 bits (764), Expect = 4e-81
 Identities = 162/341 (47%), Positives = 218/341 (63%), Gaps = 17/341 (4%)

Query: 1   MNFWRYCFFAFTLLSVVIFVRFYSSQLSPPKS--YEKLNSSSERYFRKTACNHALEKMPV 58
           M  W       TL  ++I    Y+  +S P S   + +    +   R   C+ AL    V
Sbjct: 1   MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60

Query: 59  FLWENILPSPLRSV----PCKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLF 114
                +LPS L ++     C  Y+ +NHYIT+PLS EEAAFPLAYVM I +DFDTFE LF
Sbjct: 61  ----QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLF 116

Query: 115 RAIYMPQNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCL 174
            AIYMPQNVYC+HVD+ A  ++K +V +LL CF NAFI+S++E ++Y G SRLQADL C+
Sbjct: 117 WAIYMPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACM 176

Query: 175 KDLVASEVPWKYVINTCGQDFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQ 234
           +DL+AS V W+YV NT   DFPLKTNREIVQ+LK     NITP ++    + +R KY H+
Sbjct: 177 RDLIASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHR 236

Query: 235 EHTDKGGFFVKNTNILKTSPPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTY 294
           E+  +   FV   +  K+ PP QL I+FG++YVALTR+FV F L ++ AI+LLQ S+DTY
Sbjct: 237 EYRTRAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTY 296

Query: 295 SPDEHFWVTLNRVSGVPGSMPNASWTGNLRAIKWSDMEDRH 335
           SPD+HFW+TLN +  V G+ P   W   + A+     ++RH
Sbjct: 297 SPDKHFWITLNNIP-VEGTGP---W---ILAVNSGSCQNRH 330


>gi|239742810 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
           sapiens]
          Length = 391

 Score =  298 bits (764), Expect = 4e-81
 Identities = 162/341 (47%), Positives = 218/341 (63%), Gaps = 17/341 (4%)

Query: 1   MNFWRYCFFAFTLLSVVIFVRFYSSQLSPPKS--YEKLNSSSERYFRKTACNHALEKMPV 58
           M  W       TL  ++I    Y+  +S P S   + +    +   R   C+ AL    V
Sbjct: 1   MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60

Query: 59  FLWENILPSPLRSV----PCKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLF 114
                +LPS L ++     C  Y+ +NHYIT+PLS EEAAFPLAYVM I +DFDTFE LF
Sbjct: 61  ----QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLF 116

Query: 115 RAIYMPQNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCL 174
            AIYMPQNVYC+HVD+ A  ++K +V +LL CF NAFI+S++E ++Y G SRLQADL C+
Sbjct: 117 WAIYMPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACM 176

Query: 175 KDLVASEVPWKYVINTCGQDFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQ 234
           +DL+AS V W+YV NT   DFPLKTNREIVQ+LK     NITP ++    + +R KY H+
Sbjct: 177 RDLIASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHR 236

Query: 235 EHTDKGGFFVKNTNILKTSPPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTY 294
           E+  +   FV   +  K+ PP QL I+FG++YVALTR+FV F L ++ AI+LLQ S+DTY
Sbjct: 237 EYRTRAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTY 296

Query: 295 SPDEHFWVTLNRVSGVPGSMPNASWTGNLRAIKWSDMEDRH 335
           SPD+HFW+TLN +  V G+ P   W   + A+     ++RH
Sbjct: 297 SPDKHFWITLNNIP-VEGTGP---W---ILAVNSGSCQNRH 330


>gi|7706127 core 2 beta-1,6-N-acetylglucosaminyltransferase 3 [Homo
           sapiens]
          Length = 453

 Score =  284 bits (727), Expect = 9e-77
 Identities = 144/323 (44%), Positives = 193/323 (59%), Gaps = 10/323 (3%)

Query: 74  CKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYMPQNVYCVHVDEKAP 133
           C  Y T   Y    +S+EE +FP+AY +V+HKD    ERL  AIY   N+YC+H D KAP
Sbjct: 110 CDIYQTLRGYAQKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAP 169

Query: 134 AEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVASEVPWKYVINTCGQ 193
             +K ++  L  CF N FIASK E+V YA ISRLQADLNCL DL+ S + WKYVIN CGQ
Sbjct: 170 DTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQ 229

Query: 194 DFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDKGGFFVK---NTNIL 250
           DFPLK+N E+V  LK   G N+   V PP+  ++R  Y H E       +VK    TNI 
Sbjct: 230 DFPLKSNFELVSELKKLNGANMLETVKPPNSKLERFTY-HHELRRVPYEYVKLPIRTNIS 288

Query: 251 KTSPPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEHFWVTLNRVSGV 310
           K +PPH + I+ G+AY  L++ FV ++  +    D   WSKDTYSPDEHFW TL RV G+
Sbjct: 289 KEAPPHNIQIFVGSAYFVLSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVPGI 348

Query: 311 PGSMPNAS-----WTGNLRAIKWSDMED-RHGGCHGHYVHGICIYGNGDLKWLVNSPSLF 364
           PG +  ++          R +KW+  E   +  C G ++  +CIYG  +L+WL+     F
Sbjct: 349 PGEISRSAQDVSDLQSKTRLVKWNYYEGFFYPSCTGSHLRSVCIYGAAELRWLIKDGHWF 408

Query: 365 ANKFELNTYPLTVECLELRHRER 387
           ANKF+    P+ ++CL  +  E+
Sbjct: 409 ANKFDSKVDPILIKCLAEKLEEQ 431


>gi|148277035 beta-1,3-galactosyl-O-glycosyl-glycoprotein
           beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 428

 Score =  278 bits (711), Expect = 6e-75
 Identities = 140/327 (42%), Positives = 202/327 (61%), Gaps = 20/327 (6%)

Query: 74  CKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYMPQNVYCVHVDEKAP 133
           C  ++ +  YI  PLS+EEA FP+AY +V+H   +  +RL RAIYMPQN YC+HVD K+ 
Sbjct: 100 CSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSE 159

Query: 134 AEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVASEVPWKYVINTCGQ 193
             Y  +V  + SCF N F+AS+ ESVVYA  SR+QADLNC+KDL A    WKY+IN CG 
Sbjct: 160 DSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGM 219

Query: 194 DFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDKGGFFVKNTNILKTS 253
           DFP+KTN EIV+ LK   G+N       P H  +R K  ++    K    + NT  +K  
Sbjct: 220 DFPIKTNLEIVRKLKLLMGENNLETERMPSHKEERWKKRYEVVNGK----LTNTGTVKML 275

Query: 254 PPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEHFWVTLNRVSGVPGS 313
           PP +  ++ G+AY  ++R++V +VL++++   L++W++DTYSPDE+ W T+ R+  VPGS
Sbjct: 276 PPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIPEVPGS 335

Query: 314 MPNASWTGNL-------RAIKWSDMEDR------HGGCHGHYVHGICIYGNGDLKWLVNS 360
           +P AS   +L       R +KW   E        +  C G +V  +CI+G GDL W++  
Sbjct: 336 LP-ASHKYDLSDMQAVARFVKWQYFEGDVSKGAPYPPCDGVHVRSVCIFGAGDLNWMLRK 394

Query: 361 PSLFANKFELNTYPLTVECLE--LRHR 385
             LFANKF+++     ++CL+  LRH+
Sbjct: 395 HHLFANKFDVDVDLFAIQCLDEHLRHK 421


>gi|148277033 beta-1,3-galactosyl-O-glycosyl-glycoprotein
           beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 428

 Score =  278 bits (711), Expect = 6e-75
 Identities = 140/327 (42%), Positives = 202/327 (61%), Gaps = 20/327 (6%)

Query: 74  CKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYMPQNVYCVHVDEKAP 133
           C  ++ +  YI  PLS+EEA FP+AY +V+H   +  +RL RAIYMPQN YC+HVD K+ 
Sbjct: 100 CSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSE 159

Query: 134 AEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVASEVPWKYVINTCGQ 193
             Y  +V  + SCF N F+AS+ ESVVYA  SR+QADLNC+KDL A    WKY+IN CG 
Sbjct: 160 DSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGM 219

Query: 194 DFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDKGGFFVKNTNILKTS 253
           DFP+KTN EIV+ LK   G+N       P H  +R K  ++    K    + NT  +K  
Sbjct: 220 DFPIKTNLEIVRKLKLLMGENNLETERMPSHKEERWKKRYEVVNGK----LTNTGTVKML 275

Query: 254 PPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEHFWVTLNRVSGVPGS 313
           PP +  ++ G+AY  ++R++V +VL++++   L++W++DTYSPDE+ W T+ R+  VPGS
Sbjct: 276 PPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIPEVPGS 335

Query: 314 MPNASWTGNL-------RAIKWSDMEDR------HGGCHGHYVHGICIYGNGDLKWLVNS 360
           +P AS   +L       R +KW   E        +  C G +V  +CI+G GDL W++  
Sbjct: 336 LP-ASHKYDLSDMQAVARFVKWQYFEGDVSKGAPYPPCDGVHVRSVCIFGAGDLNWMLRK 394

Query: 361 PSLFANKFELNTYPLTVECLE--LRHR 385
             LFANKF+++     ++CL+  LRH+
Sbjct: 395 HHLFANKFDVDVDLFAIQCLDEHLRHK 421


>gi|148277031 beta-1,3-galactosyl-O-glycosyl-glycoprotein
           beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 428

 Score =  278 bits (711), Expect = 6e-75
 Identities = 140/327 (42%), Positives = 202/327 (61%), Gaps = 20/327 (6%)

Query: 74  CKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYMPQNVYCVHVDEKAP 133
           C  ++ +  YI  PLS+EEA FP+AY +V+H   +  +RL RAIYMPQN YC+HVD K+ 
Sbjct: 100 CSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSE 159

Query: 134 AEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVASEVPWKYVINTCGQ 193
             Y  +V  + SCF N F+AS+ ESVVYA  SR+QADLNC+KDL A    WKY+IN CG 
Sbjct: 160 DSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGM 219

Query: 194 DFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDKGGFFVKNTNILKTS 253
           DFP+KTN EIV+ LK   G+N       P H  +R K  ++    K    + NT  +K  
Sbjct: 220 DFPIKTNLEIVRKLKLLMGENNLETERMPSHKEERWKKRYEVVNGK----LTNTGTVKML 275

Query: 254 PPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEHFWVTLNRVSGVPGS 313
           PP +  ++ G+AY  ++R++V +VL++++   L++W++DTYSPDE+ W T+ R+  VPGS
Sbjct: 276 PPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIPEVPGS 335

Query: 314 MPNASWTGNL-------RAIKWSDMEDR------HGGCHGHYVHGICIYGNGDLKWLVNS 360
           +P AS   +L       R +KW   E        +  C G +V  +CI+G GDL W++  
Sbjct: 336 LP-ASHKYDLSDMQAVARFVKWQYFEGDVSKGAPYPPCDGVHVRSVCIFGAGDLNWMLRK 394

Query: 361 PSLFANKFELNTYPLTVECLE--LRHR 385
             LFANKF+++     ++CL+  LRH+
Sbjct: 395 HHLFANKFDVDVDLFAIQCLDEHLRHK 421


>gi|148277029 beta-1,3-galactosyl-O-glycosyl-glycoprotein
           beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 428

 Score =  278 bits (711), Expect = 6e-75
 Identities = 140/327 (42%), Positives = 202/327 (61%), Gaps = 20/327 (6%)

Query: 74  CKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYMPQNVYCVHVDEKAP 133
           C  ++ +  YI  PLS+EEA FP+AY +V+H   +  +RL RAIYMPQN YC+HVD K+ 
Sbjct: 100 CSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSE 159

Query: 134 AEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVASEVPWKYVINTCGQ 193
             Y  +V  + SCF N F+AS+ ESVVYA  SR+QADLNC+KDL A    WKY+IN CG 
Sbjct: 160 DSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGM 219

Query: 194 DFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDKGGFFVKNTNILKTS 253
           DFP+KTN EIV+ LK   G+N       P H  +R K  ++    K    + NT  +K  
Sbjct: 220 DFPIKTNLEIVRKLKLLMGENNLETERMPSHKEERWKKRYEVVNGK----LTNTGTVKML 275

Query: 254 PPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEHFWVTLNRVSGVPGS 313
           PP +  ++ G+AY  ++R++V +VL++++   L++W++DTYSPDE+ W T+ R+  VPGS
Sbjct: 276 PPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIPEVPGS 335

Query: 314 MPNASWTGNL-------RAIKWSDMEDR------HGGCHGHYVHGICIYGNGDLKWLVNS 360
           +P AS   +L       R +KW   E        +  C G +V  +CI+G GDL W++  
Sbjct: 336 LP-ASHKYDLSDMQAVARFVKWQYFEGDVSKGAPYPPCDGVHVRSVCIFGAGDLNWMLRK 394

Query: 361 PSLFANKFELNTYPLTVECLE--LRHR 385
             LFANKF+++     ++CL+  LRH+
Sbjct: 395 HHLFANKFDVDVDLFAIQCLDEHLRHK 421


>gi|21614523 beta-1,3-galactosyl-O-glycosyl-glycoprotein
           beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 428

 Score =  278 bits (711), Expect = 6e-75
 Identities = 140/327 (42%), Positives = 202/327 (61%), Gaps = 20/327 (6%)

Query: 74  CKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYMPQNVYCVHVDEKAP 133
           C  ++ +  YI  PLS+EEA FP+AY +V+H   +  +RL RAIYMPQN YC+HVD K+ 
Sbjct: 100 CSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSE 159

Query: 134 AEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVASEVPWKYVINTCGQ 193
             Y  +V  + SCF N F+AS+ ESVVYA  SR+QADLNC+KDL A    WKY+IN CG 
Sbjct: 160 DSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGM 219

Query: 194 DFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDKGGFFVKNTNILKTS 253
           DFP+KTN EIV+ LK   G+N       P H  +R K  ++    K    + NT  +K  
Sbjct: 220 DFPIKTNLEIVRKLKLLMGENNLETERMPSHKEERWKKRYEVVNGK----LTNTGTVKML 275

Query: 254 PPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEHFWVTLNRVSGVPGS 313
           PP +  ++ G+AY  ++R++V +VL++++   L++W++DTYSPDE+ W T+ R+  VPGS
Sbjct: 276 PPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIPEVPGS 335

Query: 314 MPNASWTGNL-------RAIKWSDMEDR------HGGCHGHYVHGICIYGNGDLKWLVNS 360
           +P AS   +L       R +KW   E        +  C G +V  +CI+G GDL W++  
Sbjct: 336 LP-ASHKYDLSDMQAVARFVKWQYFEGDVSKGAPYPPCDGVHVRSVCIFGAGDLNWMLRK 394

Query: 361 PSLFANKFELNTYPLTVECLE--LRHR 385
             LFANKF+++     ++CL+  LRH+
Sbjct: 395 HHLFANKFDVDVDLFAIQCLDEHLRHK 421


>gi|110611246 xylosyltransferase II [Homo sapiens]
          Length = 865

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 35/303 (11%)

Query: 97  LAYVMVIH-KDFDTFERLFRAIYMPQNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASK 155
           +AY++V+H +     +RL +A+Y  Q+ + +HVD+++   ++E V +L   + N  +   
Sbjct: 234 IAYMLVVHGRAIRQLKRLLKAVYHEQHFFYIHVDKRSDYLHREVV-ELAQGYDNVRVTPW 292

Query: 156 TESVVYAGISRLQADLNCLKDLVASEVP---WKYVINTCGQDFPLKTNREIVQHLKGFKG 212
               ++ G S L+  L  ++DL+  EVP   W + IN    D+P +TN E+V  L   + 
Sbjct: 293 RMVTIWGGASLLRMYLRSMRDLL--EVPGWAWDFFINLSATDYPTRTNEELVAFLSKNRD 350

Query: 213 KNITPGVLPPDHAIKRTKYVHQEHTDKGGFFVKNTNILKTSP---PHQLTIYFGTAYVAL 269
           KN         H    ++++ ++  D+  F   ++++ +      P  + +  G+ +  L
Sbjct: 351 KNFL-----KSHGRDNSRFIKKQGLDR-LFHECDSHMWRLGERQIPAGIVVDGGSDWFVL 404

Query: 270 TRDFVDFVL--RDQRAIDLLQWSKDTYSPDEHFWVTLNRVSGVPGSMPNASWTGNLRAIK 327
           TR FV++V+   D     L Q+   T  P E F+ T+   S    ++ +     NLR   
Sbjct: 405 TRSFVEYVVYTDDPLVAQLRQFYTYTLLPAESFFHTVLENSLACETLVD----NNLRVTN 460

Query: 328 WSDMEDRHGGCHGHYVHGI--CIYGNGDLK-------WLVNSPSLFANKFELNTYPLTVE 378
           W    +R  GC   Y H +  C     D K         V+ P+ FA KFE       +E
Sbjct: 461 W----NRKLGCKCQYKHIVDWCGCSPNDFKPQDFLRLQQVSRPTFFARKFESTVNQEVLE 516

Query: 379 CLE 381
            L+
Sbjct: 517 ILD 519


>gi|28269693 xylosyltransferase I [Homo sapiens]
          Length = 959

 Score = 78.6 bits (192), Expect = 9e-15
 Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 31/289 (10%)

Query: 97  LAYVMVIH-KDFDTFERLFRAIYMPQNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASK 155
           +A+V+V+H +     +R+F+AIY   + Y +HVD+++   +++ V Q+   + N  +   
Sbjct: 328 IAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKRSNYLHRQ-VLQVSRQYSNVRVTPW 386

Query: 156 TESVVYAGISRLQADLNCLKDLVA-SEVPWKYVINTCGQDFPLKTNREIVQHLKGFKGKN 214
             + ++ G S L   L  ++DL+  ++ PW + IN    D+P++TN ++V  L  ++  N
Sbjct: 387 RMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMN 446

Query: 215 ITPGVLPPDHAIKRTKYVHQEHTDKGGFFVKNTNILKTSP---PHQLTIYFGTAYVALTR 271
                    H     +++ ++  D+  F   + ++ +      P  + +  G+ +  L R
Sbjct: 447 FL-----KSHGRDNARFIRKQGLDR-LFLECDAHMWRLGDRRIPEGIAVDGGSDWFLLNR 500

Query: 272 DFVDFVL--RDQRAIDLLQWSKDTYSPDEHFWVTLNRVSGVPGSMPNASWTGNLRAIKWS 329
            FV++V    D     + Q+   T  P E F+ T+   S    +M +     NLR   W 
Sbjct: 501 RFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSPHCDTMVD----NNLRITNW- 555

Query: 330 DMEDRHGGCHGHYVHGI--CIYGNGDLK-------WLVNSPSLFANKFE 369
              +R  GC   Y H +  C     D K            P+ FA KFE
Sbjct: 556 ---NRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQTARPTFFARKFE 601


>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
          Length = 976

 Score = 32.3 bits (72), Expect = 0.78
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 26/134 (19%)

Query: 27  LSPPKSYEKLNSS---SERYFRK-TACNHALEK-MPVFLW---ENILPSPLRSV-----P 73
           L  P+ Y KL+S    S+   R  T+ +H + K    +LW   +N L +PL        P
Sbjct: 801 LETPEIYWKLDSKAVPSQTVSRNFTSVDHGISKDKRDYLWTSAKNTLSTPLPKAYTVKTP 860

Query: 74  CKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDF-------------DTFERLFRAIYMP 120
            K  L Q   +  P+ E +    +A+   I+ D              +T + L+R    P
Sbjct: 861 TKPKLQQRENLNIPIEESKKKRKMAFEFDINSDSSETTDLLSMVSEEETLKTLYRNNNPP 920

Query: 121 QNVYCVHVDEKAPA 134
            +  CV   +KAP+
Sbjct: 921 ASHLCVKTPKKAPS 934


>gi|157388921 transmembrane and coiled-coil domains 3 [Homo sapiens]
          Length = 677

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 88  LSEEEAAFPLAYVMVIHKDFDTFER-LFRAIYMPQNVYCVHVDEKAPAEYKESVRQLLSC 146
           LS+EE  F +    +  K+ +  E  +F+A+Y  Q    +  D K     KES RQ L  
Sbjct: 84  LSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA--LQGDYKDVVNMKESSRQRLEA 141

Query: 147 FQNAFIASKTE 157
            + A I  +TE
Sbjct: 142 LREAAIKEETE 152


>gi|40018629 hypothetical protein LOC23325 [Homo sapiens]
          Length = 1173

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 13/74 (17%)

Query: 71   SVPCKDYLTQNHYITSPLSEEEAAFPLAYVMVI---HKDFDT----------FERLFRAI 117
            S+ CK+ L + + I +  +++  A  +AY++ +   +++FD+          + +  RA+
Sbjct: 1028 SISCKEKLNKKNKIGAAFTDDGFAMGVAYILKLLDQYREFDSLHWFQSVREKYLKEIRAV 1087

Query: 118  YMPQNVYCVHVDEK 131
               QNV     DEK
Sbjct: 1088 AKQQNVQSASQDEK 1101


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,307,946
Number of Sequences: 37866
Number of extensions: 729854
Number of successful extensions: 1379
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1342
Number of HSP's gapped (non-prelim): 24
length of query: 402
length of database: 18,247,518
effective HSP length: 105
effective length of query: 297
effective length of database: 14,271,588
effective search space: 4238661636
effective search space used: 4238661636
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.