Guide to the Human Genome
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Name: ITPRIPL2 Sequence: fasta or formatted (535aa) NCBI GI: 77798169
Description:

inositol 1,4,5-triphosphate receptor interacting protein-like 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         57           3
 C cysteine            3.2         17           2
 D aspartate           3.0         16           1
 E glutamate           5.0         27           2
 F phenylalanine       3.4         18           1
 G glycine             9.3         50           2
 H histidine           3.6         19           1
 I isoleucine          1.5          8           1
 K lysine              2.1         11           1
 L leucine            17.2         92           4
 M methionine          0.4          2           1
 N asparagine          0.4          2           1
 P proline             8.4         45           5
 Q glutamine           3.2         17           1
 R arginine            9.9         53           2
 S serine              5.6         30           2
 T threonine           2.8         15           1
 V valine              6.7         36           1
 W tryptophan          1.5          8           1
 Y tyrosine            2.2         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inositol 1,4,5-triphosphate receptor interacting pro... 
ITPRIPL1              0.047   inositol 1,4,5-triphosphate receptor interacting pro...
ITPRIPL1              0.047   inositol 1,4,5-triphosphate receptor interacting pro...
ITPRIP                0.037   inositol 1,4,5-triphosphate receptor interacting pro...
MAB21L1               0.011   mab-21-like protein 1 
MAB21L2               0.011   mab-21-like protein 2 
ARHGEF17              0.010   Rho guanine nucleotide exchange factor (GEF) 17 [Hom...
SAC3D1                0.009   SAC3 domain containing 1 
C6orf150              0.007   hypothetical protein LOC115004 
C16orf38              0.006   hypothetical protein LOC390667 
VCPIP1                0.005   valosin containing protein (p97)/p47 complex interac...
B4GALNT4              0.005   beta 1,4-N-acetylgalactosaminyltransferase-transfera...
COL23A1               0.005   collagen, type XXIII, alpha 1 
HOXB2                 0.005   homeobox B2 
LOC100287171          0.005   PREDICTED: hypothetical protein XP_002342940 isofor...
LOC100287171          0.005   PREDICTED: hypothetical protein XP_002342939 isofor...
WASH1                 0.005   WAS protein family homolog 1 
PLEKHA4               0.005   pleckstrin homology domain containing family A memb...
PLEKHA4               0.005   pleckstrin homology domain containing family A memb...
DGKZ                  0.005   diacylglycerol kinase zeta isoform 4 
DGKZ                  0.005   diacylglycerol kinase zeta isoform 1 
DGKZ                  0.005   diacylglycerol kinase zeta isoform 2 
DGKZ                  0.005   diacylglycerol kinase zeta isoform 3 
HECA                  0.005   headcase 
STK36                 0.005   serine/threonine kinase 36 
FUSSEL18              0.004   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.004   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.004   PREDICTED: functional smad suppressing element 18 [...
DIDO1                 0.004   death inducer-obliterator 1 isoform c 
FMN2                  0.004   formin 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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