Guide to the Human Genome
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Name: ABHD6 Sequence: fasta or formatted (337aa) NCBI GI: 189027141
Description:

abhydrolase domain containing 6

Referenced in:

Additional Enzymes and Related Sequences

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         17           2
 C cysteine            2.4          8           1
 D aspartate           5.3         18           2
 E glutamate           3.9         13           2
 F phenylalanine       4.2         14           1
 G glycine             5.6         19           2
 H histidine           3.9         13           2
 I isoleucine          5.6         19           2
 K lysine              6.2         21           2
 L leucine            11.3         38           2
 M methionine          3.6         12           1
 N asparagine          3.6         12           2
 P proline             4.7         16           1
 Q glutamine           5.3         18           2
 R arginine            4.5         15           2
 S serine              7.4         25           2
 T threonine           3.0         10           2
 V valine              9.2         31           2
 W tryptophan          1.5          5           1
 Y tyrosine            3.9         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   abhydrolase domain containing 6 
EPHX3                 0.041   abhydrolase domain containing 9 
EPHX3                 0.041   abhydrolase domain containing 9 
ABHD11                0.038   abhydrolase domain containing 11 isoform 1 
ABHD11                0.038   abhydrolase domain containing 11 isoform 2 
SERHL2                0.033   serine hydrolase-like 2 
EPHX4                 0.030   abhydrolase domain containing 7 
ABHD5                 0.027   abhydrolase domain containing 5 
EPHX2                 0.023   epoxide hydrolase 2, cytoplasmic 
MGLL                  0.018   monoglyceride lipase isoform 2 
MGLL                  0.018   monoglyceride lipase isoform 1 
PPME1                 0.015   protein phosphatase methylesterase 1 
ABHD4                 0.015   abhydrolase domain containing 4 
ABHD14B               0.014   abhydrolase domain containing 14B 
ABHD14B               0.014   abhydrolase domain containing 14B 
LIPC                  0.012   lipase C precursor 
LOC100289576          0.011   PREDICTED: hypothetical protein XP_002343622 
PLA1A                 0.011   phospholipase A1 member A 
DNAH1                 0.011   dynein, axonemal, heavy chain 1 
ABHD11                0.008   abhydrolase domain containing 11 isoform 8 
ABHD8                 0.008   abhydrolase domain containing 8 
MAGEA10               0.006   melanoma antigen family A, 10 
MAGEA10               0.006   melanoma antigen family A, 10 
NUP205                0.006   nucleoporin 205kDa 
SAE1                  0.005   SUMO1 activating enzyme subunit 1 isoform a 
SAE1                  0.005   SUMO1 activating enzyme subunit 1 isoform a 
MEST                  0.005   mesoderm specific transcript isoform a 
MEST                  0.005   mesoderm specific transcript isoform b 
MEST                  0.005   mesoderm specific transcript isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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