Guide to the Human Genome
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Name: GPR171 Sequence: fasta or formatted (319aa) NCBI GI: 153792776
Description:

G protein-coupled receptor 171

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         18           1
 C cysteine            4.4         14           1
 D aspartate           2.5          8           1
 E glutamate           3.8         12           1
 F phenylalanine       7.2         23           2
 G glycine             2.2          7           1
 H histidine           1.9          6           1
 I isoleucine         10.7         34           2
 K lysine              7.2         23           2
 L leucine            11.9         38           3
 M methionine          2.5          8           2
 N asparagine          6.0         19           2
 P proline             3.8         12           1
 Q glutamine           2.2          7           1
 R arginine            3.1         10           1
 S serine              5.6         18           2
 T threonine           6.3         20           2
 V valine              7.5         24           2
 W tryptophan          1.3          4           1
 Y tyrosine            4.4         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 171 
P2RY14                0.305   P2Y14 receptor 
P2RY14                0.305   P2Y14 receptor 
P2RY13                0.270   purinergic receptor P2Y, G-protein coupled, 13 [Hom...
P2RY12                0.260   purinergic receptor P2Y12 
P2RY12                0.260   purinergic receptor P2Y12 
GPR87                 0.223   G protein-coupled receptor 87 
GPR34                 0.186   G protein-coupled receptor 34 
GPR34                 0.186   G protein-coupled receptor 34 
GPR17                 0.175   G protein-coupled receptor 17 isoform b 
GPR17                 0.175   G protein-coupled receptor 17 isoform b 
GPR17                 0.175   G protein-coupled receptor 17 isoform a 
GPR17                 0.175   G protein-coupled receptor 17 isoform a 
CYSLTR1               0.174   cysteinyl leukotriene receptor 1 
GPR183                0.167   EBV-induced G protein-coupled receptor 2 
PTAFR                 0.166   platelet-activating factor receptor 
LPAR6                 0.156   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.156   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.156   G-protein coupled purinergic receptor P2Y5 
P2RY1                 0.156   purinergic receptor P2Y1 
CYSLTR2               0.140   cysteinyl leukotriene receptor 2 
BDKRB2                0.140   bradykinin receptor B2 
CXCR7                 0.138   chemokine orphan receptor 1 
IL8RB                 0.137   interleukin 8 receptor beta 
LPAR5                 0.133   lysophosphatidic acid receptor 5 
LPAR5                 0.133   lysophosphatidic acid receptor 5 
SSTR1                 0.122   somatostatin receptor 1 
CCR8                  0.121   chemokine (C-C motif) receptor 8 
P2RY4                 0.121   pyrimidinergic receptor P2Y4 
NIACR2                0.119   G protein-coupled receptor 109B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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