Search of human proteins with 7706244

Search of human proteins with 7706244

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7706244 cutA divalent cation tolerance homolog isoform 2
[Homo sapiens]
         (156 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|62526024 cutA divalent cation tolerance homolog isoform 2 [Ho...   305   8e-84
gi|7706244 cutA divalent cation tolerance homolog isoform 2 [Hom...   305   8e-84
gi|62526026 cutA divalent cation tolerance homolog isoform 3 [Ho...   305   8e-84
gi|62198241 cutA divalent cation tolerance homolog isoform 1 [Ho...   305   8e-84
gi|62526022 cutA divalent cation tolerance homolog isoform 2 [Ho...   305   8e-84
gi|47419911 transcriptional intermediary factor 1 alpha isoform ...    30   0.64 
gi|47419909 transcriptional intermediary factor 1 alpha isoform ...    30   0.64 
gi|239755930 PREDICTED: hypothetical protein XP_002344747 [Homo ...    29   1.8  
gi|239750450 PREDICTED: hypothetical protein [Homo sapiens]            29   1.8  
gi|239744752 PREDICTED: hypothetical protein XP_002343247 [Homo ...    29   1.8  
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ...    29   1.8  
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ...    29   1.8  
gi|158420731 chromodomain helicase DNA binding protein 3 isoform...    29   1.8  
gi|113722133 senataxin [Homo sapiens]                                  28   2.4  
gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens]        28   2.4  
gi|46852172 kinesin family member 13B [Homo sapiens]                   28   3.2  
gi|225543215 antigen identified by monoclonal antibody Ki-67 iso...    28   4.1  
gi|103472005 antigen identified by monoclonal antibody Ki-67 iso...    28   4.1  
gi|223941808 N-glycanase 1 isoform 4 [Homo sapiens]                    28   4.1  
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom...    28   4.1  
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom...    28   4.1  
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ...    28   4.1  
gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens]               28   4.1  
gi|5453810 netrin 3 [Homo sapiens]                                     28   4.1  
gi|4503129 catenin, alpha-like 1 [Homo sapiens]                        28   4.1  
gi|187608767 E74-like factor 4 [Homo sapiens]                          27   5.4  
gi|4503555 E74-like factor 4 [Homo sapiens]                            27   5.4  
gi|19923597 Sin3A-associated protein, 130kDa isoform b [Homo sap...    27   5.4  
gi|225579127 Sin3A-associated protein, 130kDa isoform a [Homo sa...    27   5.4  
gi|7662208 GTPase regulator associated with the focal adhesion k...    27   5.4  

>gi|62526024 cutA divalent cation tolerance homolog isoform 2 [Homo
           sapiens]
          Length = 156

 Score =  305 bits (782), Expect = 8e-84
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 1   MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60
           MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE
Sbjct: 1   MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60

Query: 61  IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120
           IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY
Sbjct: 61  IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120

Query: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156
           EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP
Sbjct: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156


>gi|7706244 cutA divalent cation tolerance homolog isoform 2 [Homo
           sapiens]
          Length = 156

 Score =  305 bits (782), Expect = 8e-84
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 1   MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60
           MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE
Sbjct: 1   MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60

Query: 61  IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120
           IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY
Sbjct: 61  IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120

Query: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156
           EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP
Sbjct: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156


>gi|62526026 cutA divalent cation tolerance homolog isoform 3 [Homo
           sapiens]
          Length = 179

 Score =  305 bits (782), Expect = 8e-84
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 1   MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60
           MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE
Sbjct: 24  MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 83

Query: 61  IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120
           IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY
Sbjct: 84  IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 143

Query: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156
           EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP
Sbjct: 144 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 179


>gi|62198241 cutA divalent cation tolerance homolog isoform 1 [Homo
           sapiens]
          Length = 198

 Score =  305 bits (782), Expect = 8e-84
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 1   MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60
           MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE
Sbjct: 43  MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 102

Query: 61  IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120
           IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY
Sbjct: 103 IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 162

Query: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156
           EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP
Sbjct: 163 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 198


>gi|62526022 cutA divalent cation tolerance homolog isoform 2 [Homo
           sapiens]
          Length = 156

 Score =  305 bits (782), Expect = 8e-84
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 1   MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60
           MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE
Sbjct: 1   MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60

Query: 61  IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120
           IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY
Sbjct: 61  IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120

Query: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156
           EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP
Sbjct: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156


>gi|47419911 transcriptional intermediary factor 1 alpha isoform a
           [Homo sapiens]
          Length = 1050

 Score = 30.4 bits (67), Expect = 0.64
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 5   LPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
           LP   R L+LP  +L  A  +PP  P+P S   SG  P +     + CP
Sbjct: 82  LPAPQRYLMLPAPMLGSAE-TPPPVPAPGSPV-SGSSPFATQVGVIRCP 128


>gi|47419909 transcriptional intermediary factor 1 alpha isoform b
           [Homo sapiens]
          Length = 1016

 Score = 30.4 bits (67), Expect = 0.64
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 5   LPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
           LP   R L+LP  +L  A  +PP  P+P S   SG  P +     + CP
Sbjct: 82  LPAPQRYLMLPAPMLGSAE-TPPPVPAPGSPV-SGSSPFATQVGVIRCP 128


>gi|239755930 PREDICTED: hypothetical protein XP_002344747 [Homo
          sapiens]
          Length = 64

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 18 LLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAK 59
          L TM+S   P  PSP     S ++PG  +A +   P   +A+
Sbjct: 12 LYTMSSEVLPQPPSPTITIFSSFLPGPGAAVWARAPGASIAR 53


>gi|239750450 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 64

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 18 LLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAK 59
          L TM+S   P  PSP     S ++PG  +A +   P   +A+
Sbjct: 12 LYTMSSEVLPQPPSPTITIFSSFLPGPGAAVWARAPGASIAR 53


>gi|239744752 PREDICTED: hypothetical protein XP_002343247 [Homo
          sapiens]
          Length = 64

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 18 LLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAK 59
          L TM+S   P  PSP     S ++PG  +A +   P   +A+
Sbjct: 12 LYTMSSEVLPQPPSPTITIFSSFLPGPGAAVWARAPGASIAR 53


>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
            [Homo sapiens]
          Length = 2000

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 1    MPALL----PVASRLLLLPRVLLT-MASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
            +PA L    P+A+RL +  R +L+ +AS      P+PA   G    P    AAF   P
Sbjct: 1882 LPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAYPPGPYATPPGYGAAFSAAP 1939


>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
            [Homo sapiens]
          Length = 1966

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 1    MPALL----PVASRLLLLPRVLLT-MASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
            +PA L    P+A+RL +  R +L+ +AS      P+PA   G    P    AAF   P
Sbjct: 1848 LPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAYPPGPYATPPGYGAAFSAAP 1905


>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
            [Homo sapiens]
          Length = 2059

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 1    MPALL----PVASRLLLLPRVLLT-MASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
            +PA L    P+A+RL +  R +L+ +AS      P+PA   G    P    AAF   P
Sbjct: 1941 LPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAYPPGPYATPPGYGAAFSAAP 1998


>gi|113722133 senataxin [Homo sapiens]
          Length = 2677

 Score = 28.5 bits (62), Expect = 2.4
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 4    LLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIAR 63
            L PV  R L  P  +     GS P    P+S   SG+   SV+A+    P++  +KEI  
Sbjct: 2465 LKPVLQRSLTHPPTIAP--EGSRPQGGLPSSKLDSGFAKTSVAASLYHTPSD--SKEITL 2520

Query: 64   AVVEK 68
             V  K
Sbjct: 2521 TVTSK 2525


>gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens]
          Length = 882

 Score = 28.5 bits (62), Expect = 2.4
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 10/80 (12%)

Query: 20  TMASGSPPTQPSPASDS------GSGYVPGSV--SAAFVTCPNEKVAKEIARAVVEKRLA 71
           T   GSPP +P P   +      G G   GS   S  F++      A  +      +   
Sbjct: 129 TSPGGSPPARPIPGQSAAPTLAGGGGGAAGSTPGSPVFLSAAAGSTAGSLRELATSRTAP 188

Query: 72  ACVN--LIPQITSIYEWKGK 89
           A  N  L+P   ++Y ++GK
Sbjct: 189 AAKNPCLLPYGKALYSYEGK 208


>gi|46852172 kinesin family member 13B [Homo sapiens]
          Length = 1826

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 15   PRVLLTMASGSPPTQ---PSPASDSGSGYVPGSVSAA 48
            P + +T  + +P  Q   PSP S++ SGY   SVS A
Sbjct: 1540 PVIAVTAVTPAPEAQDGPPSPLSEASSGYFSHSVSTA 1576


>gi|225543215 antigen identified by monoclonal antibody Ki-67
           isoform 2 [Homo sapiens]
          Length = 2896

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 51  TCPNEKVAKEIARAVVEKRLAACVNLIPQI-TSIYEWKGKIEEDSEVLMMIKT 102
           T   ++  + I +A VE  L AC NL+P    +++  K  + E+ ++++ + T
Sbjct: 903 TSTKQRPKRSIRKADVEGELLACRNLMPSAGKAMHTPKPSVGEEKDIIIFVGT 955


>gi|103472005 antigen identified by monoclonal antibody Ki-67 isoform
            1 [Homo sapiens]
          Length = 3256

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 51   TCPNEKVAKEIARAVVEKRLAACVNLIPQI-TSIYEWKGKIEEDSEVLMMIKT 102
            T   ++  + I +A VE  L AC NL+P    +++  K  + E+ ++++ + T
Sbjct: 1263 TSTKQRPKRSIRKADVEGELLACRNLMPSAGKAMHTPKPSVGEEKDIIIFVGT 1315


>gi|223941808 N-glycanase 1 isoform 4 [Homo sapiens]
          Length = 558

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 17/124 (13%)

Query: 13  LLPRVLLTMASGSPPTQPSPASDSG--SGYVPGSVSAA----------FVTCPNEKVAKE 60
           LL R+++ +     P  P P    G  SG V   V+            F+ C NEK++K+
Sbjct: 433 LLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETLFIPCENEKISKQ 492

Query: 61  --IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVH 118
             +   +V+ R     N      +I  W+  + +   +   ++T   ++   T  +  + 
Sbjct: 493 LHLCYNIVKDRYVRVSN---NNQTISGWENGVWKMESIFRKVETDWHMITVFTPMLIFLV 549

Query: 119 PYEV 122
           P ++
Sbjct: 550 PLKL 553


>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
           sapiens]
          Length = 305

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 15/44 (34%), Positives = 21/44 (47%)

Query: 10  RLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
           RLLL PR +    + SPP +P+  S  G    P  + +  V  P
Sbjct: 90  RLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAP 133


>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
           sapiens]
          Length = 305

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 15/44 (34%), Positives = 21/44 (47%)

Query: 10  RLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
           RLLL PR +    + SPP +P+  S  G    P  + +  V  P
Sbjct: 90  RLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAP 133


>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
           sapiens]
          Length = 316

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 15/44 (34%), Positives = 21/44 (47%)

Query: 10  RLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
           RLLL PR +    + SPP +P+  S  G    P  + +  V  P
Sbjct: 101 RLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAP 144


>gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens]
          Length = 532

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 20  TMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIARAV 65
           T   G P T P+P   +GSG +    S A +     K  K  +RAV
Sbjct: 376 TATKGVPATNPAPGKGTGSGLI--GASGATMPTDTSKSEKLASRAV 419


>gi|5453810 netrin 3 [Homo sapiens]
          Length = 580

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 3/41 (7%)

Query: 11 LLLLPRVLLTMASGSPPTQPSPASDSGS---GYVPGSVSAA 48
          LLL    L    S  PP    P  D G    G VPG V+AA
Sbjct: 8  LLLTAGTLFAALSPGPPAPADPCHDEGGAPRGCVPGLVNAA 48


>gi|4503129 catenin, alpha-like 1 [Homo sapiens]
          Length = 734

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)

Query: 30  PSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGK 89
           P PA   G+G V GS S+ F          EI    VE+ L   + L+ QIT++   K  
Sbjct: 5   PGPAGVGGAGAVYGSGSSGFAL----DSGLEIKTRSVEQTL---LPLVSQITTLINHKDN 57

Query: 90  IEEDSEVLMMIK 101
            ++  + L  I+
Sbjct: 58  TKKSDKTLQAIQ 69


>gi|187608767 E74-like factor 4 [Homo sapiens]
          Length = 663

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 6/56 (10%)

Query: 12  LLLPRVLLTMASGSPPTQPSPASDSGSGYV------PGSVSAAFVTCPNEKVAKEI 61
           L+L  +   +A  + PT P+P + +G+G        PG+V AAF+       A  +
Sbjct: 481 LILSGLPQLLAGANRPTNPAPPTVTGAGPAGPSSQPPGTVIAAFIRTSGTTAAPRV 536


>gi|4503555 E74-like factor 4 [Homo sapiens]
          Length = 663

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 6/56 (10%)

Query: 12  LLLPRVLLTMASGSPPTQPSPASDSGSGYV------PGSVSAAFVTCPNEKVAKEI 61
           L+L  +   +A  + PT P+P + +G+G        PG+V AAF+       A  +
Sbjct: 481 LILSGLPQLLAGANRPTNPAPPTVTGAGPAGPSSQPPGTVIAAFIRTSGTTAAPRV 536


>gi|19923597 Sin3A-associated protein, 130kDa isoform b [Homo
           sapiens]
          Length = 1048

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 13/100 (13%)

Query: 15  PRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACV 74
           P +   +A+ SPP+QP+ A  +  G VP       +T P   +A     +V      + V
Sbjct: 722 PTIPTMIAAASPPSQPAVALSTIPGAVP-------ITPPITTIAAAPPPSVTVGGSLSSV 774

Query: 75  NLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFV 114
            L P +  I     K++E+ E + +++  S++ P  T+ V
Sbjct: 775 -LGPPVPEI-----KVKEEVEPMDIMRPVSAVPPLATNTV 808


>gi|225579127 Sin3A-associated protein, 130kDa isoform a [Homo
           sapiens]
          Length = 1083

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 13/100 (13%)

Query: 15  PRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACV 74
           P +   +A+ SPP+QP+ A  +  G VP       +T P   +A     +V      + V
Sbjct: 757 PTIPTMIAAASPPSQPAVALSTIPGAVP-------ITPPITTIAAAPPPSVTVGGSLSSV 809

Query: 75  NLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFV 114
            L P +  I     K++E+ E + +++  S++ P  T+ V
Sbjct: 810 -LGPPVPEI-----KVKEEVEPMDIMRPVSAVPPLATNTV 843


>gi|7662208 GTPase regulator associated with the focal adhesion
           kinase pp125 isoform a [Homo sapiens]
          Length = 814

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 16/54 (29%), Positives = 23/54 (42%)

Query: 25  SPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIP 78
           S P+ P P S + S   P    A FV      V   +AR+ +    +  VN +P
Sbjct: 681 SAPSSPMPTSSTSSDSSPVRSVAGFVWFSVAAVVLSLARSSLHAVFSLLVNFVP 734


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,825,669
Number of Sequences: 37866
Number of extensions: 245163
Number of successful extensions: 1506
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1481
Number of HSP's gapped (non-prelim): 59
length of query: 156
length of database: 18,247,518
effective HSP length: 94
effective length of query: 62
effective length of database: 14,688,114
effective search space: 910663068
effective search space used: 910663068
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.