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Search of human proteins with 7706143
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7706143 armadillo repeat containing, X-linked 1 [Homo
sapiens]
(453 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens] 902 0.0
gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens] 318 6e-87
gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens] 318 6e-87
gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens] 318 6e-87
gi|7662162 ALEX2 protein [Homo sapiens] 287 1e-77
gi|29540562 ALEX2 protein [Homo sapiens] 287 1e-77
gi|31377663 SVH protein isoform a [Homo sapiens] 266 4e-71
gi|238776793 SVH protein isoform b [Homo sapiens] 255 5e-68
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 224 2e-58
gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo s... 218 9e-57
gi|238776797 SVH protein isoform e [Homo sapiens] 216 4e-56
gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo s... 215 8e-56
gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo s... 215 8e-56
gi|238776795 SVH protein isoform c [Homo sapiens] 169 4e-42
gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo s... 165 9e-41
gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo s... 162 8e-40
gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo s... 162 8e-40
gi|238776799 SVH protein isoform d [Homo sapiens] 159 5e-39
gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens] 152 5e-37
gi|150378528 G protein-coupled receptor associated sorting prote... 134 1e-31
gi|150378489 G protein-coupled receptor associated sorting prote... 134 1e-31
gi|103472136 G protein-coupled receptor associated sorting prote... 134 1e-31
gi|51702248 G protein-coupled receptor associated sorting protei... 130 3e-30
gi|19923967 G protein-coupled receptor associated sorting protei... 130 3e-30
gi|216547715 basic helix-loop-helix domain containing, class B, ... 119 7e-27
gi|216547682 basic helix-loop-helix domain containing, class B, ... 119 7e-27
gi|216547672 basic helix-loop-helix domain containing, class B, ... 119 7e-27
gi|216547663 basic helix-loop-helix domain containing, class B, ... 119 7e-27
gi|216547655 basic helix-loop-helix domain containing, class B, ... 119 7e-27
gi|216547646 basic helix-loop-helix domain containing, class B, ... 119 7e-27
>gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]
Length = 453
Score = 902 bits (2332), Expect = 0.0
Identities = 453/453 (100%), Positives = 453/453 (100%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT 60
MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT
Sbjct: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT 60
Query: 61 NAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGGGLEAKAKALFNTLKEQAS 120
NAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGGGLEAKAKALFNTLKEQAS
Sbjct: 61 NAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGGGLEAKAKALFNTLKEQAS 120
Query: 121 AKAGKGARVGTISGNRTLAPSLPCPGGRGGGCHPTRSGSRAGGRASGKSKGKARSKSTRA 180
AKAGKGARVGTISGNRTLAPSLPCPGGRGGGCHPTRSGSRAGGRASGKSKGKARSKSTRA
Sbjct: 121 AKAGKGARVGTISGNRTLAPSLPCPGGRGGGCHPTRSGSRAGGRASGKSKGKARSKSTRA 180
Query: 181 PATTWPVRRGKFNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQ 240
PATTWPVRRGKFNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQ
Sbjct: 181 PATTWPVRRGKFNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQ 240
Query: 241 NAIRELGGVPIIAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRL 300
NAIRELGGVPIIAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRL
Sbjct: 241 NAIRELGGVPIIAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRL 300
Query: 301 DSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAM 360
DSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAM
Sbjct: 301 DSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAM 360
Query: 361 TRELVSCKVPSELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFL 420
TRELVSCKVPSELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFL
Sbjct: 361 TRELVSCKVPSELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFL 420
Query: 421 FKESGVCVKKIKALANHNDLVVKVKVLKVLTKL 453
FKESGVCVKKIKALANHNDLVVKVKVLKVLTKL
Sbjct: 421 FKESGVCVKKIKALANHNDLVVKVKVLKVLTKL 453
>gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 318 bits (815), Expect = 6e-87
Identities = 188/453 (41%), Positives = 259/453 (57%), Gaps = 84/453 (18%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT 60
MG R+ G V AG+VIGAGACYC+YRL GR +N+ E E G
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNK-------------EKMAEGGSGDVD 47
Query: 61 NAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGGGLEAKAKALFNTLKEQAS 120
+AG SGA+ S+ + + E+K+ +
Sbjct: 48 DAGDCSGARYNDWSDDDDDSN-----------------------ESKSIVWY-------- 76
Query: 121 AKAGKGARVGTISGNRTLAPSLPCPGGRGGGCHPTRSGSRAGGRASGKSKGKARSKSTRA 180
AR+GT +G TR+ +RA RA+ + + S
Sbjct: 77 ---PPWARIGTEAG--------------------TRARARARARATRARRAVQKRAS--- 110
Query: 181 PATTWPVRRGKFNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQ 240
P D +LS +LQKVL ++E + P+I E AL+ LGNNAAY+FN+
Sbjct: 111 --------------PNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNR 156
Query: 241 NAIRELGGVPIIAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRL 300
+ IR+LGG+PI+AK++ T+DPI++EK LNNLSVNAENQ ++K Y++QVCDDT+ RL
Sbjct: 157 DIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRL 216
Query: 301 DSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAM 360
+S+VQ+AGLRLLTNMTVTN YQH+L+ S DFF L GN TK+Q++KL++N ENPAM
Sbjct: 217 NSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAM 276
Query: 361 TRELVSCKVPSELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFL 420
TREL+ +VPS L SLFNK+ ++E++L +L +FENINDN K E ++ +F SLFF
Sbjct: 277 TRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFF 336
Query: 421 FKESGVCVKKIKALANHNDLVVKVKVLKVLTKL 453
KE VC K+ + +H+D +VKVKV K + KL
Sbjct: 337 LKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
>gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 318 bits (815), Expect = 6e-87
Identities = 188/453 (41%), Positives = 259/453 (57%), Gaps = 84/453 (18%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT 60
MG R+ G V AG+VIGAGACYC+YRL GR +N+ E E G
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNK-------------EKMAEGGSGDVD 47
Query: 61 NAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGGGLEAKAKALFNTLKEQAS 120
+AG SGA+ S+ + + E+K+ +
Sbjct: 48 DAGDCSGARYNDWSDDDDDSN-----------------------ESKSIVWY-------- 76
Query: 121 AKAGKGARVGTISGNRTLAPSLPCPGGRGGGCHPTRSGSRAGGRASGKSKGKARSKSTRA 180
AR+GT +G TR+ +RA RA+ + + S
Sbjct: 77 ---PPWARIGTEAG--------------------TRARARARARATRARRAVQKRAS--- 110
Query: 181 PATTWPVRRGKFNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQ 240
P D +LS +LQKVL ++E + P+I E AL+ LGNNAAY+FN+
Sbjct: 111 --------------PNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNR 156
Query: 241 NAIRELGGVPIIAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRL 300
+ IR+LGG+PI+AK++ T+DPI++EK LNNLSVNAENQ ++K Y++QVCDDT+ RL
Sbjct: 157 DIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRL 216
Query: 301 DSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAM 360
+S+VQ+AGLRLLTNMTVTN YQH+L+ S DFF L GN TK+Q++KL++N ENPAM
Sbjct: 217 NSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAM 276
Query: 361 TRELVSCKVPSELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFL 420
TREL+ +VPS L SLFNK+ ++E++L +L +FENINDN K E ++ +F SLFF
Sbjct: 277 TRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFF 336
Query: 421 FKESGVCVKKIKALANHNDLVVKVKVLKVLTKL 453
KE VC K+ + +H+D +VKVKV K + KL
Sbjct: 337 LKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
>gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 318 bits (815), Expect = 6e-87
Identities = 188/453 (41%), Positives = 259/453 (57%), Gaps = 84/453 (18%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT 60
MG R+ G V AG+VIGAGACYC+YRL GR +N+ E E G
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNK-------------EKMAEGGSGDVD 47
Query: 61 NAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGGGLEAKAKALFNTLKEQAS 120
+AG SGA+ S+ + + E+K+ +
Sbjct: 48 DAGDCSGARYNDWSDDDDDSN-----------------------ESKSIVWY-------- 76
Query: 121 AKAGKGARVGTISGNRTLAPSLPCPGGRGGGCHPTRSGSRAGGRASGKSKGKARSKSTRA 180
AR+GT +G TR+ +RA RA+ + + S
Sbjct: 77 ---PPWARIGTEAG--------------------TRARARARARATRARRAVQKRAS--- 110
Query: 181 PATTWPVRRGKFNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQ 240
P D +LS +LQKVL ++E + P+I E AL+ LGNNAAY+FN+
Sbjct: 111 --------------PNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNR 156
Query: 241 NAIRELGGVPIIAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRL 300
+ IR+LGG+PI+AK++ T+DPI++EK LNNLSVNAENQ ++K Y++QVCDDT+ RL
Sbjct: 157 DIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRL 216
Query: 301 DSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAM 360
+S+VQ+AGLRLLTNMTVTN YQH+L+ S DFF L GN TK+Q++KL++N ENPAM
Sbjct: 217 NSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAM 276
Query: 361 TRELVSCKVPSELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFL 420
TREL+ +VPS L SLFNK+ ++E++L +L +FENINDN K E ++ +F SLFF
Sbjct: 277 TRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFF 336
Query: 421 FKESGVCVKKIKALANHNDLVVKVKVLKVLTKL 453
KE VC K+ + +H+D +VKVKV K + KL
Sbjct: 337 LKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
>gi|7662162 ALEX2 protein [Homo sapiens]
Length = 632
Score = 287 bits (735), Expect = 1e-77
Identities = 173/418 (41%), Positives = 239/418 (57%), Gaps = 10/418 (2%)
Query: 43 ESTDTSEIGVETVKGAKTNAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGG 102
E+ + T A T A G + V P S + PG A + S
Sbjct: 216 EAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSAT 275
Query: 103 GLEAKAKALFNTLKEQASAKAGKGARV-------GTISGN-RTLAPSLPCPGGRGGGCHP 154
G K T GK ++V G G+ A + GG+
Sbjct: 276 GAVPKGGGKGVTRSRNGGKGKGKKSKVEVDELGMGFRPGDGAAAAAAASANGGQAFLAEV 335
Query: 155 TRSGSRAGGRASGKSKGKARSKSTRAPATTWPVRRGKFNFPYKIDDILSAPDLQKVLNIL 214
S G +S + ++ R PV K FPY+ID+IL DL+KVL +L
Sbjct: 336 PDSEEGESGWTDTESDSDSEPETQRRGRGRRPVAMQKRPFPYEIDEILGVRDLRKVLALL 395
Query: 215 ERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDPIIREKTYNALNNL 274
++++DPFIQ+VAL+TL NNA YS NQ IR+LGG+PIIA +I DP I+EK A+NNL
Sbjct: 396 QKSDDPFIQQVALLTLSNNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNL 455
Query: 275 SVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFA 334
S N ENQG+++ Y+++V DD M L+SAVQ+ GL+ LTNMT+TN YQHLL S +FF
Sbjct: 456 SENYENQGRLQVYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFR 515
Query: 335 LLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDREILLNILTLFE 394
LL G K++I+K++ NF ENP M ++L+S +VP+ SL+N + EIL+N LTLFE
Sbjct: 516 LLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFE 575
Query: 395 NINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHNDLVVKVKVLKVLTK 452
I DN++ E + +EF++ SLF+L SGVCVKKI+ALANH+DL+VKVKV+K++ K
Sbjct: 576 IIYDNLRAE--VFNYREFNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
Score = 59.3 bits (142), Expect = 7e-09
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 22/136 (16%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT 60
M R R+AGCVAAG+VIGAGA YCVY+ GRD+ +K + K
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKK-----------------RMAKPKN 43
Query: 61 NAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGGGLEAKAKALFNTLKEQAS 120
A AG+GA+ + + LG P +A + + + +A AL +T+ +A
Sbjct: 44 RAVAGTGARARAGLRAGFTIDLGSGFSPPTPVRAEAEDRA----QDEASAL-DTVGAEAV 98
Query: 121 AKAGKGARVGTISGNR 136
A A A + +G++
Sbjct: 99 APAASSAEAQSGAGSQ 114
>gi|29540562 ALEX2 protein [Homo sapiens]
Length = 632
Score = 287 bits (735), Expect = 1e-77
Identities = 173/418 (41%), Positives = 239/418 (57%), Gaps = 10/418 (2%)
Query: 43 ESTDTSEIGVETVKGAKTNAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGG 102
E+ + T A T A G + V P S + PG A + S
Sbjct: 216 EAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSAT 275
Query: 103 GLEAKAKALFNTLKEQASAKAGKGARV-------GTISGN-RTLAPSLPCPGGRGGGCHP 154
G K T GK ++V G G+ A + GG+
Sbjct: 276 GAVPKGGGKGVTRSRNGGKGKGKKSKVEVDELGMGFRPGDGAAAAAAASANGGQAFLAEV 335
Query: 155 TRSGSRAGGRASGKSKGKARSKSTRAPATTWPVRRGKFNFPYKIDDILSAPDLQKVLNIL 214
S G +S + ++ R PV K FPY+ID+IL DL+KVL +L
Sbjct: 336 PDSEEGESGWTDTESDSDSEPETQRRGRGRRPVAMQKRPFPYEIDEILGVRDLRKVLALL 395
Query: 215 ERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDPIIREKTYNALNNL 274
++++DPFIQ+VAL+TL NNA YS NQ IR+LGG+PIIA +I DP I+EK A+NNL
Sbjct: 396 QKSDDPFIQQVALLTLSNNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNL 455
Query: 275 SVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFA 334
S N ENQG+++ Y+++V DD M L+SAVQ+ GL+ LTNMT+TN YQHLL S +FF
Sbjct: 456 SENYENQGRLQVYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFR 515
Query: 335 LLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDREILLNILTLFE 394
LL G K++I+K++ NF ENP M ++L+S +VP+ SL+N + EIL+N LTLFE
Sbjct: 516 LLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFE 575
Query: 395 NINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHNDLVVKVKVLKVLTK 452
I DN++ E + +EF++ SLF+L SGVCVKKI+ALANH+DL+VKVKV+K++ K
Sbjct: 576 IIYDNLRAE--VFNYREFNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
Score = 59.3 bits (142), Expect = 7e-09
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 22/136 (16%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT 60
M R R+AGCVAAG+VIGAGA YCVY+ GRD+ +K + K
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKK-----------------RMAKPKN 43
Query: 61 NAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGGGLEAKAKALFNTLKEQAS 120
A AG+GA+ + + LG P +A + + + +A AL +T+ +A
Sbjct: 44 RAVAGTGARARAGLRAGFTIDLGSGFSPPTPVRAEAEDRA----QDEASAL-DTVGAEAV 98
Query: 121 AKAGKGARVGTISGNR 136
A A A + +G++
Sbjct: 99 APAASSAEAQSGAGSQ 114
>gi|31377663 SVH protein isoform a [Homo sapiens]
Length = 343
Score = 266 bits (679), Expect = 4e-71
Identities = 150/305 (49%), Positives = 199/305 (65%), Gaps = 9/305 (2%)
Query: 156 RSGSRAGGRASGKSKGKARSKSTRAPAT--TWPVRRGKFNFPYKI-----DDILSAPDLQ 208
RS AG G S+G+ +S R P T TW + K + P + DD+L+A LQ
Sbjct: 41 RSSKSAGALEEGTSEGQLCGRSAR-PQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQ 99
Query: 209 KVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDPIIREKTY 268
K+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I + I+EK
Sbjct: 100 KLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKAL 159
Query: 269 NALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHYQHLLSYS 328
NALNNLSVN ENQ KIK YISQVC+D L+SAVQ+AGL LLTNMTVTN +QH+L
Sbjct: 160 NALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSY 219
Query: 329 FPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDREILLN 388
D F +L GN TK+Q++KL++N +ENPAMT L+ +V S +SL++ +EILL
Sbjct: 220 ITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLR 279
Query: 389 ILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHNDLVVKVKVLK 448
+LTLF+NI + +K EG + + F+ SLFFL C +KI+AL +H+D VK KV+
Sbjct: 280 VLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVT 338
Query: 449 VLTKL 453
++ K+
Sbjct: 339 IIPKI 343
Score = 50.1 bits (118), Expect = 4e-06
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT 60
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSAGA 48
Query: 61 NAGAGSGAKLQGDS 74
S +L G S
Sbjct: 49 LEEGTSEGQLCGRS 62
>gi|238776793 SVH protein isoform b [Homo sapiens]
Length = 308
Score = 255 bits (652), Expect = 5e-68
Identities = 135/255 (52%), Positives = 178/255 (69%), Gaps = 1/255 (0%)
Query: 199 DDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKT 258
DD+L+A LQK+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I
Sbjct: 55 DDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINH 114
Query: 259 KDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVT 318
+ I+EK NALNNLSVN ENQ KIK YISQVC+D L+SAVQ+AGL LLTNMTVT
Sbjct: 115 SNQSIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVT 174
Query: 319 NHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFN 378
N +QH+L D F +L GN TK+Q++KL++N +ENPAMT L+ +V S +SL++
Sbjct: 175 NDHQHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYD 234
Query: 379 KEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHN 438
+EILL +LTLF+NI + +K EG + + F+ SLFFL C +KI+AL +H+
Sbjct: 235 SHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHH 293
Query: 439 DLVVKVKVLKVLTKL 453
D VK KV+ ++ K+
Sbjct: 294 DAEVKEKVVTIIPKI 308
Score = 49.7 bits (117), Expect = 5e-06
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 12/59 (20%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAK 59
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A+
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSAE 47
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 224 bits (570), Expect = 2e-58
Identities = 157/483 (32%), Positives = 256/483 (53%), Gaps = 41/483 (8%)
Query: 2 GRTREAGCVA---AGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGA 58
G EAG A AG GAGA G + +W D ++T VE+ GA
Sbjct: 1910 GAGAEAGAGAGAEAGAEAGAGA-----GAGPGTESGAGVWSWDGDATT-----VESRLGA 1959
Query: 59 KTNAGAGSG--AKLQGDSEVKPEVSLGLEDCP------GVKEKAHS-GSHSGGGLEAKAK 109
AG S A+ G+ E+ E S +E+ E +++ S SG ++
Sbjct: 1960 GEEAGVESWTLARNVGEDELSRESSPDIEEISLRSLFWAESENSNTFRSKSGKDASFESG 2019
Query: 110 ALFNT-LKEQASAKAGKGARVGTISGNRTLAPSLPCPGGRGGGCHPTRS--GSRAGGRAS 166
A NT +K++ A G +GN + P + +R G
Sbjct: 2020 AGDNTSIKDKFEAAGGVDIGSWFCAGNENTSEDKSAPKAKAKKSSESRGIYPYMVPGAGM 2079
Query: 167 GKSKGK---ARSKSTRAPATTWPV--------RRGKFNFPY----KIDDILSAPDLQKVL 211
G G + +K ++PV R G+ P+ K + + DL+K++
Sbjct: 2080 GSWDGAMIWSETKFAHQSEASFPVEDESRKQTRTGEKTRPWSCRCKHEANMDPRDLEKLI 2139
Query: 212 NILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDPIIREKTYNAL 271
++E T DP + E+A L N+A YS++ +R +GG+ +I L+ P +R+K NAL
Sbjct: 2140 CMIEMTEDPSVHEIANNALYNSADYSYSHEVVRNVGGISVIESLLNNPYPSVRQKALNAL 2199
Query: 272 NNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHYQHLLSYSFPD 331
NN+SV AEN K+KTY++QVC+DT+ L+S VQ+AGLRL+ ++T+T+ YQH+++ +
Sbjct: 2200 NNISVAAENHRKVKTYLNQVCEDTVTYPLNSNVQLAGLRLIRHLTITSEYQHMVTNYISE 2259
Query: 332 FFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDREILLNILT 391
F LL +G+ TK ++ +++NF++NP+MT++L+ P+ LI++F+K+ +E +LN L+
Sbjct: 2260 FLRLLTVGSGETKDHVLGMLLNFSKNPSMTKDLLIANAPTSLINIFSKKETKENILNALS 2319
Query: 392 LFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANH-NDLVVKVKVLKVL 450
LFENIN + K A ++ +FS++SL+FLF+ C KK++ALA ND VK +V ++
Sbjct: 2320 LFENINYHFKRRAKAFTQDKFSKNSLYFLFQRPKACAKKLRALAAECNDPEVKERVELLI 2379
Query: 451 TKL 453
+KL
Sbjct: 2380 SKL 2382
Score = 60.1 bits (144), Expect = 4e-09
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 20/143 (13%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT 60
MGR +E G V AG+VI AG CY +Y+ GR ++ + + + S + +ETV G ++
Sbjct: 93 MGRIQEVGWVTAGLVIWAGTCYYIYKFTKGRAQSVRTL-----ARNGSTVKMETVVGVQS 147
Query: 61 NAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGGGLEAKAKALFNTL-KEQA 119
A + A++ + KP+V +G A +G+ SG G E + KA + + +
Sbjct: 148 QTLAINEAEI----KTKPQVEIG----------AETGARSGPGAEVETKATAIAIHRANS 193
Query: 120 SAKAGKGARVGTISGNRTLAPSL 142
AKA GA T S ++ +A +L
Sbjct: 194 QAKAMVGAEPETQSESKVVAGTL 216
Score = 30.8 bits (68), Expect = 2.6
Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 17/136 (12%)
Query: 53 ETVKGAKTNAGAGS--------GAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGGGL 104
ET+ GA+ S GA + G +V+ S E PG K K S++
Sbjct: 1011 ETLPGARNKVKGNSNAISKAEAGAGIMGSVQVQVVASFQGEVLPGAKNKVRGNSNAVPKA 1070
Query: 105 EAKAKALFNTLKEQASAKAGKGARVGT---ISGNRTLAPSLPCPGGRGGGCHPTRSGSRA 161
EA A + + + QA A + +G + GN P G G G +
Sbjct: 1071 EAGADTV-GSAQPQAVANSQSETLLGARNKVKGNTIAVPK----AGTGAGTRHSAQPQIV 1125
Query: 162 GGRASGKSKGKARSKS 177
G + G++ AR KS
Sbjct: 1126 AG-SQGETLPGARDKS 1140
>gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 218 bits (555), Expect = 9e-57
Identities = 125/255 (49%), Positives = 160/255 (62%), Gaps = 25/255 (9%)
Query: 199 DDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKT 258
DD+L+A LQK+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I
Sbjct: 55 DDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINH 114
Query: 259 KDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVT 318
+ I+EK NALNNLSVN ENQ KIK YISQVC+D L+SAVQ+AGLRLLTNMTVT
Sbjct: 115 SNQSIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVT 174
Query: 319 NHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFN 378
N +QH+L D F +L GN T KV S +SL++
Sbjct: 175 NDHQHMLHSYITDLFQVLLTGNGNT------------------------KVDSSFLSLYD 210
Query: 379 KEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHN 438
+EILL +LTLF+NI + +K EG + + F+ SLFFL C +KI+AL +H+
Sbjct: 211 SHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHH 269
Query: 439 DLVVKVKVLKVLTKL 453
D VK KV+ ++ K+
Sbjct: 270 DAEVKEKVVTIIPKI 284
Score = 49.7 bits (117), Expect = 5e-06
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 12/59 (20%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAK 59
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A+
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSAE 47
>gi|238776797 SVH protein isoform e [Homo sapiens]
Length = 284
Score = 216 bits (549), Expect = 4e-56
Identities = 124/255 (48%), Positives = 159/255 (62%), Gaps = 25/255 (9%)
Query: 199 DDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKT 258
DD+L+A LQK+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I
Sbjct: 55 DDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINH 114
Query: 259 KDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVT 318
+ I+EK NALNNLSVN ENQ KIK YISQVC+D L+SAVQ+AGL LLTNMTVT
Sbjct: 115 SNQSIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVT 174
Query: 319 NHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFN 378
N +QH+L D F +L GN T KV S +SL++
Sbjct: 175 NDHQHMLHSYITDLFQVLLTGNGNT------------------------KVDSSFLSLYD 210
Query: 379 KEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHN 438
+EILL +LTLF+NI + +K EG + + F+ SLFFL C +KI+AL +H+
Sbjct: 211 SHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHH 269
Query: 439 DLVVKVKVLKVLTKL 453
D VK KV+ ++ K+
Sbjct: 270 DAEVKEKVVTIIPKI 284
Score = 49.7 bits (117), Expect = 5e-06
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 12/59 (20%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAK 59
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A+
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSAE 47
>gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 215 bits (547), Expect = 8e-56
Identities = 123/255 (48%), Positives = 160/255 (62%), Gaps = 25/255 (9%)
Query: 199 DDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKT 258
DD+L+A LQK+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I
Sbjct: 55 DDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINH 114
Query: 259 KDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVT 318
+ I++K NALNNLSVN ENQ KIK YISQVC+D L+SAVQ+AGLRLLTNMTVT
Sbjct: 115 SNQSIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVT 174
Query: 319 NHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFN 378
N +QH+L D F +L GN T KV S +SL++
Sbjct: 175 NDHQHMLHSYITDLFQVLLTGNGNT------------------------KVDSSFLSLYD 210
Query: 379 KEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHN 438
+EILL +LTLF++I + +K EG + + F+ SLFFL C +KI+AL +H+
Sbjct: 211 SHVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHH 269
Query: 439 DLVVKVKVLKVLTKL 453
D VK KV+ ++ K+
Sbjct: 270 DAEVKEKVVTIIPKI 284
Score = 49.7 bits (117), Expect = 5e-06
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 12/59 (20%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAK 59
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A+
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSAE 47
>gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 284
Score = 215 bits (547), Expect = 8e-56
Identities = 123/255 (48%), Positives = 160/255 (62%), Gaps = 25/255 (9%)
Query: 199 DDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKT 258
DD+L+A LQK+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I
Sbjct: 55 DDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINH 114
Query: 259 KDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVT 318
+ I++K NALNNLSVN ENQ KIK YISQVC+D L+SAVQ+AGLRLLTNMTVT
Sbjct: 115 SNQSIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVT 174
Query: 319 NHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFN 378
N +QH+L D F +L GN T KV S +SL++
Sbjct: 175 NDHQHMLHSYITDLFQVLLTGNGNT------------------------KVDSSFLSLYD 210
Query: 379 KEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHN 438
+EILL +LTLF++I + +K EG + + F+ SLFFL C +KI+AL +H+
Sbjct: 211 SHVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHH 269
Query: 439 DLVVKVKVLKVLTKL 453
D VK KV+ ++ K+
Sbjct: 270 DAEVKEKVVTIIPKI 284
Score = 49.7 bits (117), Expect = 5e-06
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 12/59 (20%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAK 59
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A+
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSAE 47
>gi|238776795 SVH protein isoform c [Homo sapiens]
Length = 284
Score = 169 bits (429), Expect = 4e-42
Identities = 116/305 (38%), Positives = 157/305 (51%), Gaps = 68/305 (22%)
Query: 156 RSGSRAGGRASGKSKGKARSKSTRAPAT--TWPVRRGKFNFPYKI-----DDILSAPDLQ 208
RS AG G S+G+ +S R P T TW + K + P + DD+L+A LQ
Sbjct: 41 RSSKSAGALEEGTSEGQLCGRSAR-PQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQ 99
Query: 209 KVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDPIIREKTY 268
K+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I + I+EK
Sbjct: 100 KLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKAL 159
Query: 269 NALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHYQHLLSYS 328
NALNNLSVN ENQ KIK + L+LL N+
Sbjct: 160 NALNNLSVNVENQIKIKVQV--------------------LKLLLNL------------- 186
Query: 329 FPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDREILLN 388
+ENPAMT L+ +V S +SL++ +EILL
Sbjct: 187 --------------------------SENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLR 220
Query: 389 ILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHNDLVVKVKVLK 448
+LTLF+NI + +K EG + + F+ SLFFL C +KI+AL +H+D VK KV+
Sbjct: 221 VLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVT 279
Query: 449 VLTKL 453
++ K+
Sbjct: 280 IIPKI 284
Score = 50.1 bits (118), Expect = 4e-06
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT 60
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSAGA 48
Query: 61 NAGAGSGAKLQGDS 74
S +L G S
Sbjct: 49 LEEGTSEGQLCGRS 62
>gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 165 bits (417), Expect = 9e-41
Identities = 106/255 (41%), Positives = 137/255 (53%), Gaps = 56/255 (21%)
Query: 199 DDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKT 258
DD+L+A LQK+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I
Sbjct: 55 DDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINH 114
Query: 259 KDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVT 318
+ I+EK NALNNLSVN ENQ KIK YISQVC+D L+SAV
Sbjct: 115 SNQSIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAV-------------- 160
Query: 319 NHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFN 378
L GN TK V S +SL++
Sbjct: 161 -----------------LLTGNGNTK------------------------VDSSFLSLYD 179
Query: 379 KEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHN 438
+EILL +LTLF+NI + +K EG + + F+ SLFFL C +KI+AL +H+
Sbjct: 180 SHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHH 238
Query: 439 DLVVKVKVLKVLTKL 453
D VK KV+ ++ K+
Sbjct: 239 DAEVKEKVVTIIPKI 253
Score = 49.7 bits (117), Expect = 5e-06
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 12/59 (20%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAK 59
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A+
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSAE 47
>gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 162 bits (409), Expect = 8e-40
Identities = 104/255 (40%), Positives = 137/255 (53%), Gaps = 56/255 (21%)
Query: 199 DDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKT 258
DD+L+A LQK+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I
Sbjct: 55 DDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINH 114
Query: 259 KDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVT 318
+ I++K NALNNLSVN ENQ KIK YISQVC+D L+SAV
Sbjct: 115 SNQSIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAV-------------- 160
Query: 319 NHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFN 378
L GN TK V S +SL++
Sbjct: 161 -----------------LLTGNGNTK------------------------VDSSFLSLYD 179
Query: 379 KEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHN 438
+EILL +LTLF++I + +K EG + + F+ SLFFL C +KI+AL +H+
Sbjct: 180 SHVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHH 238
Query: 439 DLVVKVKVLKVLTKL 453
D VK KV+ ++ K+
Sbjct: 239 DAEVKEKVVTIIPKI 253
Score = 49.7 bits (117), Expect = 5e-06
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 12/59 (20%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAK 59
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A+
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSAE 47
>gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 253
Score = 162 bits (409), Expect = 8e-40
Identities = 104/255 (40%), Positives = 137/255 (53%), Gaps = 56/255 (21%)
Query: 199 DDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKT 258
DD+L+A LQK+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I
Sbjct: 55 DDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINH 114
Query: 259 KDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVT 318
+ I++K NALNNLSVN ENQ KIK YISQVC+D L+SAV
Sbjct: 115 SNQSIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAV-------------- 160
Query: 319 NHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFN 378
L GN TK V S +SL++
Sbjct: 161 -----------------LLTGNGNTK------------------------VDSSFLSLYD 179
Query: 379 KEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHN 438
+EILL +LTLF++I + +K EG + + F+ SLFFL C +KI+AL +H+
Sbjct: 180 SHVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHH 238
Query: 439 DLVVKVKVLKVLTKL 453
D VK KV+ ++ K+
Sbjct: 239 DAEVKEKVVTIIPKI 253
Score = 49.7 bits (117), Expect = 5e-06
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 12/59 (20%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAK 59
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A+
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSAE 47
>gi|238776799 SVH protein isoform d [Homo sapiens]
Length = 249
Score = 159 bits (402), Expect = 5e-39
Identities = 101/255 (39%), Positives = 136/255 (53%), Gaps = 60/255 (23%)
Query: 199 DDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKT 258
DD+L+A LQK+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I
Sbjct: 55 DDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINH 114
Query: 259 KDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVT 318
+ I+EK NALNNLSVN ENQ KIK + L+LL N+
Sbjct: 115 SNQSIKEKALNALNNLSVNVENQIKIKVQV--------------------LKLLLNL--- 151
Query: 319 NHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFN 378
+ENPAMT L+ +V S +SL++
Sbjct: 152 ------------------------------------SENPAMTEGLLRAQVDSSFLSLYD 175
Query: 379 KEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHN 438
+EILL +LTLF+NI + +K EG + + F+ SLFFL C +KI+AL +H+
Sbjct: 176 SHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHH 234
Query: 439 DLVVKVKVLKVLTKL 453
D VK KV+ ++ K+
Sbjct: 235 DAEVKEKVVTIIPKI 249
Score = 49.7 bits (117), Expect = 5e-06
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 12/59 (20%)
Query: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAK 59
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A+
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSAE 47
>gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens]
Length = 558
Score = 152 bits (385), Expect = 5e-37
Identities = 83/252 (32%), Positives = 150/252 (59%)
Query: 202 LSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDP 261
L + K++ +L+ T DPFI E+A + +G + AY F Q+ I ++G +I L+ +
Sbjct: 307 LEPKEFDKLVALLKLTKDPFIHEIATMIMGISPAYPFTQDIIHDVGITVMIENLVNNPNV 366
Query: 262 IIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHY 321
+ +++ S ++E ++YI QVC + C L+S VQ+AGL+LL ++++
Sbjct: 367 KEHPGALSMVDDSSESSEEPKSGESYIHQVCKGIISCPLNSPVQLAGLKLLGHLSIKFED 426
Query: 322 QHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEW 381
++++ PDF LL G+ TK ++K+ ++N A TREL+S KV S L++ FNK
Sbjct: 427 HYVITSYIPDFLTLLNKGSVKTKFYVLKVFSCLSKNHANTRELISAKVLSSLVAPFNKNE 486
Query: 382 DREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHNDLV 441
+ +LNI+ +FENIN K + ++++F++S L +F+E+ +K++ LA H+D
Sbjct: 487 SKANILNIIEIFENINFQFKTKAKLFTKEKFTKSELISIFQEAKQFGQKLQDLAEHSDPE 546
Query: 442 VKVKVLKVLTKL 453
V+ KV++++ KL
Sbjct: 547 VRDKVIRLILKL 558
>gi|150378528 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 134 bits (338), Expect = 1e-31
Identities = 73/239 (30%), Positives = 135/239 (56%), Gaps = 2/239 (0%)
Query: 202 LSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDP 261
+ + + +++L ++E+ DPFI E++ + +G +A F ++ IR+ G V +I L+
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 262 IIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHY 321
+R + ++ N I+TYI +VC++T+ +DS Q++G+R++ ++T T Y
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 322 QHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEW 381
L++ F +LL GN T+ ++K+++N +EN MT+EL+S + SE I LFN+E
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 382 DREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALA-NHND 439
+ + +L +FENI +NIK E + S +F+ L F + K+++ N ND
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKETVFSD-DDFNIEPLISAFHKVEKFAKELQGKTDNQND 1388
>gi|150378489 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 134 bits (338), Expect = 1e-31
Identities = 73/239 (30%), Positives = 135/239 (56%), Gaps = 2/239 (0%)
Query: 202 LSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDP 261
+ + + +++L ++E+ DPFI E++ + +G +A F ++ IR+ G V +I L+
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 262 IIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHY 321
+R + ++ N I+TYI +VC++T+ +DS Q++G+R++ ++T T Y
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 322 QHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEW 381
L++ F +LL GN T+ ++K+++N +EN MT+EL+S + SE I LFN+E
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 382 DREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALA-NHND 439
+ + +L +FENI +NIK E + S +F+ L F + K+++ N ND
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKETVFSD-DDFNIEPLISAFHKVEKFAKELQGKTDNQND 1388
>gi|103472136 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 134 bits (338), Expect = 1e-31
Identities = 73/239 (30%), Positives = 135/239 (56%), Gaps = 2/239 (0%)
Query: 202 LSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDP 261
+ + + +++L ++E+ DPFI E++ + +G +A F ++ IR+ G V +I L+
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 262 IIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHY 321
+R + ++ N I+TYI +VC++T+ +DS Q++G+R++ ++T T Y
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 322 QHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEW 381
L++ F +LL GN T+ ++K+++N +EN MT+EL+S + SE I LFN+E
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 382 DREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALA-NHND 439
+ + +L +FENI +NIK E + S +F+ L F + K+++ N ND
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKETVFSD-DDFNIEPLISAFHKVEKFAKELQGKTDNQND 1388
>gi|51702248 G protein-coupled receptor associated sorting protein 2
[Homo sapiens]
Length = 838
Score = 130 bits (326), Expect = 3e-30
Identities = 69/239 (28%), Positives = 135/239 (56%), Gaps = 1/239 (0%)
Query: 202 LSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDP 261
+ + + ++ L ++++ DPFI E++ + +G +A F ++ IR+ G V +I L+
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652
Query: 262 IIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHY 321
+R + +++ N I+T+I QVC++T+ +DS Q+ G+R+L ++T+T Y
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712
Query: 322 QHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEW 381
L++ F +LL N TK ++K+++N +ENPA+ ++L S K S + LFN E
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772
Query: 382 DREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKA-LANHND 439
+ + ++ +F+NI++ IK+ ++ +FS L F+E K+++A + N ND
Sbjct: 773 TNDNIQIVIKMFQNISNIIKSGKMSLIDDDFSLEPLISAFREFEELAKQLQAQIDNQND 831
>gi|19923967 G protein-coupled receptor associated sorting protein 2
[Homo sapiens]
Length = 838
Score = 130 bits (326), Expect = 3e-30
Identities = 69/239 (28%), Positives = 135/239 (56%), Gaps = 1/239 (0%)
Query: 202 LSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDP 261
+ + + ++ L ++++ DPFI E++ + +G +A F ++ IR+ G V +I L+
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652
Query: 262 IIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHY 321
+R + +++ N I+T+I QVC++T+ +DS Q+ G+R+L ++T+T Y
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712
Query: 322 QHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEW 381
L++ F +LL N TK ++K+++N +ENPA+ ++L S K S + LFN E
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772
Query: 382 DREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKA-LANHND 439
+ + ++ +F+NI++ IK+ ++ +FS L F+E K+++A + N ND
Sbjct: 773 TNDNIQIVIKMFQNISNIIKSGKMSLIDDDFSLEPLISAFREFEELAKQLQAQIDNQND 831
>gi|216547715 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 119 bits (297), Expect = 7e-27
Identities = 68/232 (29%), Positives = 134/232 (57%), Gaps = 2/232 (0%)
Query: 192 FNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPI 251
F P K++ + + + +K++++L+ T DP I ++A + +G + + F Q I E+G V +
Sbjct: 310 FACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTL 369
Query: 252 IAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRL 311
I L+ P +R+KT LN S + E Q KI+ ++ +C +TM L+S Q +GL++
Sbjct: 370 IESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKI 428
Query: 312 LTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPS 371
L +T + ++++ F + F LL GN T+ ++KL++N +ENP R++++ K +
Sbjct: 429 LGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARDMINMKALA 488
Query: 372 ELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKE 423
L +FN++ + L++ + +F NI ++I+ +G S ++L +F+E
Sbjct: 489 ALKLIFNQKEAKANLVSGVAIFINIKEHIR-KGSIVVVDHLSYNTLMAIFRE 539
>gi|216547682 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 119 bits (297), Expect = 7e-27
Identities = 68/232 (29%), Positives = 134/232 (57%), Gaps = 2/232 (0%)
Query: 192 FNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPI 251
F P K++ + + + +K++++L+ T DP I ++A + +G + + F Q I E+G V +
Sbjct: 310 FACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTL 369
Query: 252 IAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRL 311
I L+ P +R+KT LN S + E Q KI+ ++ +C +TM L+S Q +GL++
Sbjct: 370 IESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKI 428
Query: 312 LTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPS 371
L +T + ++++ F + F LL GN T+ ++KL++N +ENP R++++ K +
Sbjct: 429 LGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARDMINMKALA 488
Query: 372 ELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKE 423
L +FN++ + L++ + +F NI ++I+ +G S ++L +F+E
Sbjct: 489 ALKLIFNQKEAKANLVSGVAIFINIKEHIR-KGSIVVVDHLSYNTLMAIFRE 539
>gi|216547672 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 119 bits (297), Expect = 7e-27
Identities = 68/232 (29%), Positives = 134/232 (57%), Gaps = 2/232 (0%)
Query: 192 FNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPI 251
F P K++ + + + +K++++L+ T DP I ++A + +G + + F Q I E+G V +
Sbjct: 310 FACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTL 369
Query: 252 IAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRL 311
I L+ P +R+KT LN S + E Q KI+ ++ +C +TM L+S Q +GL++
Sbjct: 370 IESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKI 428
Query: 312 LTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPS 371
L +T + ++++ F + F LL GN T+ ++KL++N +ENP R++++ K +
Sbjct: 429 LGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARDMINMKALA 488
Query: 372 ELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKE 423
L +FN++ + L++ + +F NI ++I+ +G S ++L +F+E
Sbjct: 489 ALKLIFNQKEAKANLVSGVAIFINIKEHIR-KGSIVVVDHLSYNTLMAIFRE 539
>gi|216547663 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 119 bits (297), Expect = 7e-27
Identities = 68/232 (29%), Positives = 134/232 (57%), Gaps = 2/232 (0%)
Query: 192 FNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPI 251
F P K++ + + + +K++++L+ T DP I ++A + +G + + F Q I E+G V +
Sbjct: 310 FACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTL 369
Query: 252 IAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRL 311
I L+ P +R+KT LN S + E Q KI+ ++ +C +TM L+S Q +GL++
Sbjct: 370 IESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKI 428
Query: 312 LTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPS 371
L +T + ++++ F + F LL GN T+ ++KL++N +ENP R++++ K +
Sbjct: 429 LGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARDMINMKALA 488
Query: 372 ELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKE 423
L +FN++ + L++ + +F NI ++I+ +G S ++L +F+E
Sbjct: 489 ALKLIFNQKEAKANLVSGVAIFINIKEHIR-KGSIVVVDHLSYNTLMAIFRE 539
>gi|216547655 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 119 bits (297), Expect = 7e-27
Identities = 68/232 (29%), Positives = 134/232 (57%), Gaps = 2/232 (0%)
Query: 192 FNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPI 251
F P K++ + + + +K++++L+ T DP I ++A + +G + + F Q I E+G V +
Sbjct: 310 FACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTL 369
Query: 252 IAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRL 311
I L+ P +R+KT LN S + E Q KI+ ++ +C +TM L+S Q +GL++
Sbjct: 370 IESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKI 428
Query: 312 LTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPS 371
L +T + ++++ F + F LL GN T+ ++KL++N +ENP R++++ K +
Sbjct: 429 LGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARDMINMKALA 488
Query: 372 ELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKE 423
L +FN++ + L++ + +F NI ++I+ +G S ++L +F+E
Sbjct: 489 ALKLIFNQKEAKANLVSGVAIFINIKEHIR-KGSIVVVDHLSYNTLMAIFRE 539
>gi|216547646 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 119 bits (297), Expect = 7e-27
Identities = 68/232 (29%), Positives = 134/232 (57%), Gaps = 2/232 (0%)
Query: 192 FNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPI 251
F P K++ + + + +K++++L+ T DP I ++A + +G + + F Q I E+G V +
Sbjct: 310 FACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTL 369
Query: 252 IAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRL 311
I L+ P +R+KT LN S + E Q KI+ ++ +C +TM L+S Q +GL++
Sbjct: 370 IESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKI 428
Query: 312 LTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPS 371
L +T + ++++ F + F LL GN T+ ++KL++N +ENP R++++ K +
Sbjct: 429 LGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARDMINMKALA 488
Query: 372 ELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKE 423
L +FN++ + L++ + +F NI ++I+ +G S ++L +F+E
Sbjct: 489 ALKLIFNQKEAKANLVSGVAIFINIKEHIR-KGSIVVVDHLSYNTLMAIFRE 539
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,334,788
Number of Sequences: 37866
Number of extensions: 766356
Number of successful extensions: 4329
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 4011
Number of HSP's gapped (non-prelim): 358
length of query: 453
length of database: 18,247,518
effective HSP length: 106
effective length of query: 347
effective length of database: 14,233,722
effective search space: 4939101534
effective search space used: 4939101534
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.