Guide to the Human Genome
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Name: ARMCX3 Sequence: fasta or formatted (379aa) NCBI GI: 7705274
Description:

armadillo repeat containing, X-linked 3

Referenced in:

Additional Interaction Domain Families

Other entries for this name:
alt mRNA [379aa] armadillo repeat containing, X-linked 3
alt mRNA [379aa] armadillo repeat containing, X-linked 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         35           2
 C cysteine            1.6          6           1
 D aspartate           5.5         21           5
 E glutamate           6.9         26           2
 F phenylalanine       4.0         15           3
 G glycine             6.1         23           2
 H histidine           1.1          4           2
 I isoleucine          4.7         18           2
 K lysine              6.9         26           2
 L leucine            10.8         41           3
 M methionine          2.4          9           1
 N asparagine          7.1         27           2
 P proline             2.9         11           2
 Q glutamine           3.7         14           1
 R arginine            6.6         25           2
 S serine              6.1         23           2
 T threonine           4.0         15           1
 V valine              6.9         26           1
 W tryptophan          1.3          5           1
 Y tyrosine            2.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   armadillo repeat containing, X-linked 3 
ARMCX3                1.000   armadillo repeat containing, X-linked 3 
ARMCX3                1.000   armadillo repeat containing, X-linked 3 
ARMCX1                0.402   armadillo repeat containing, X-linked 1 
ARMC10                0.371   SVH protein isoform a 
ARMCX2                0.330   ALEX2 protein 
ARMCX2                0.330   ALEX2 protein 
ARMC10                0.326   SVH protein isoform b 
LOC100292655          0.290   PREDICTED: similar to armadillo repeat containing, ...
LOC389137             0.260   PREDICTED: similar to SVH protein isoform 1 
ARMC10                0.257   SVH protein isoform e 
LOC389137             0.255   PREDICTED: similar to SVH protein isoform 1 
LOC389137             0.255   PREDICTED: similar to SVH protein isoform 2 
ARMCX6                0.207   armadillo repeat containing, X-linked 6 
ARMCX6                0.207   armadillo repeat containing, X-linked 6 
LOC389137             0.180   PREDICTED: similar to SVH protein isoform 2 
ARMC10                0.179   SVH protein isoform d 
ARMCX5                0.176   armadillo repeat containing, X-linked 5 
LOC389137             0.176   PREDICTED: similar to SVH protein isoform 2 
LOC389137             0.176   PREDICTED: similar to SVH protein isoform 1 
ARMC10                0.163   SVH protein isoform c 
GPRASP1               0.154   G protein-coupled receptor associated sorting prote...
GPRASP1               0.154   G protein-coupled receptor associated sorting prote...
GPRASP1               0.154   G protein-coupled receptor associated sorting prote...
GPRASP2               0.140   G protein-coupled receptor associated sorting protei...
GPRASP2               0.140   G protein-coupled receptor associated sorting protei...
BHLHB9                0.133   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.133   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.133   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.133   basic helix-loop-helix domain containing, class B, ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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