Guide to the Human Genome
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Name: GPRASP1 Sequence: fasta or formatted (1395aa) NCBI GI: 150378528
Description:

G protein-coupled receptor associated sorting protein 1

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt mRNA [1395aa] G protein-coupled receptor associated sorting protein 1
alt mRNA [1395aa] G protein-coupled receptor associated sorting protein 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0        112           2
 C cysteine            1.8         25           2
 D aspartate           4.3         60           3
 E glutamate          14.6        203           4
 F phenylalanine       4.7         65           1
 G glycine             6.6         92           3
 H histidine           1.0         14           1
 I isoleucine          5.2         73           2
 K lysine              5.7         80           2
 L leucine             3.8         53           4
 M methionine          2.4         34           1
 N asparagine          3.7         51           2
 P proline             4.8         67           2
 Q glutamine           2.7         37           1
 R arginine            5.6         78           2
 S serine             10.5        146           3
 T threonine           5.3         74           4
 V valine              4.9         69           2
 W tryptophan          3.4         47           1
 Y tyrosine            1.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor associated sorting prote... 
GPRASP1               1.000   G protein-coupled receptor associated sorting prote...
GPRASP1               1.000   G protein-coupled receptor associated sorting prote...
GPRASP2               0.215   G protein-coupled receptor associated sorting protei...
GPRASP2               0.215   G protein-coupled receptor associated sorting protei...
LOC100292655          0.082   PREDICTED: similar to armadillo repeat containing, ...
BHLHB9                0.075   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.075   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.075   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.075   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.075   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.075   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.075   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.075   basic helix-loop-helix domain containing, class B, 9...
ARMCX5                0.061   armadillo repeat containing, X-linked 5 
ARMCX3                0.040   armadillo repeat containing, X-linked 3 
ARMCX3                0.040   armadillo repeat containing, X-linked 3 
ARMCX3                0.040   armadillo repeat containing, X-linked 3 
ARMCX1                0.039   armadillo repeat containing, X-linked 1 
ARMC10                0.034   SVH protein isoform b 
ARMC10                0.034   SVH protein isoform a 
ARMCX2                0.030   ALEX2 protein 
ARMCX2                0.030   ALEX2 protein 
LOC389137             0.022   PREDICTED: similar to SVH protein isoform 1 
LOC389137             0.021   PREDICTED: similar to SVH protein isoform 1 
LOC389137             0.021   PREDICTED: similar to SVH protein isoform 2 
ARMC10                0.021   SVH protein isoform e 
RPGR                  0.010   retinitis pigmentosa GTPase regulator isoform C [Hom...
LOC389137             0.010   PREDICTED: similar to SVH protein isoform 2 
ARMC10                0.010   SVH protein isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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