Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 7706127
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7706127 core 2 beta-1,6-N-acetylglucosaminyltransferase 3
[Homo sapiens]
(453 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7706127 core 2 beta-1,6-N-acetylglucosaminyltransferase 3 [Ho... 924 0.0
gi|4758422 glucosaminyl (N-acetyl) transferase 3, mucin type [Ho... 331 7e-91
gi|148277035 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 326 3e-89
gi|148277033 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 326 3e-89
gi|148277031 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 326 3e-89
gi|148277029 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 326 3e-89
gi|21614523 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6... 326 3e-89
gi|85790495 glucosaminyl (N-acetyl) transferase 2, I-branching e... 284 1e-76
gi|21717810 glucosaminyl (N-acetyl) transferase 2, I-branching e... 284 1e-76
gi|4503963 glucosaminyl (N-acetyl) transferase 2, I-branching en... 274 1e-73
gi|190684701 glucosaminyl (N-acetyl) transferase family member 7... 246 4e-65
gi|239754233 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H... 183 2e-46
gi|239748765 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H... 183 2e-46
gi|239742810 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H... 183 2e-46
gi|110611246 xylosyltransferase II [Homo sapiens] 80 3e-15
gi|28269693 xylosyltransferase I [Homo sapiens] 73 5e-13
gi|4758012 clathrin heavy chain 1 [Homo sapiens] 35 0.11
gi|197333737 guanylate-binding protein 5 [Homo sapiens] 32 1.5
gi|16418425 guanylate-binding protein 5 [Homo sapiens] 32 1.5
gi|117956387 hypothetical protein LOC80133 [Homo sapiens] 31 2.0
gi|8922854 kelch-like 26 [Homo sapiens] 30 3.4
gi|56682953 epidermal growth factor receptor pathway substrate 8... 30 5.9
>gi|7706127 core 2 beta-1,6-N-acetylglucosaminyltransferase 3 [Homo
sapiens]
Length = 453
Score = 924 bits (2389), Expect = 0.0
Identities = 453/453 (100%), Positives = 453/453 (100%)
Query: 1 MKIFKCYFKHTLQQKVFILFLTLWLLSLLKLLNVRRLFPQKDIYLVEYSLSTSPFVRNRY 60
MKIFKCYFKHTLQQKVFILFLTLWLLSLLKLLNVRRLFPQKDIYLVEYSLSTSPFVRNRY
Sbjct: 1 MKIFKCYFKHTLQQKVFILFLTLWLLSLLKLLNVRRLFPQKDIYLVEYSLSTSPFVRNRY 60
Query: 61 THVKDEVRYEVNCSGIYEQEPLEIGKSLEIRRRDIIDLEDDDVVAMTSDCDIYQTLRGYA 120
THVKDEVRYEVNCSGIYEQEPLEIGKSLEIRRRDIIDLEDDDVVAMTSDCDIYQTLRGYA
Sbjct: 61 THVKDEVRYEVNCSGIYEQEPLEIGKSLEIRRRDIIDLEDDDVVAMTSDCDIYQTLRGYA 120
Query: 121 QKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAPDTFKVAMNNLA 180
QKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAPDTFKVAMNNLA
Sbjct: 121 QKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAPDTFKVAMNNLA 180
Query: 181 KCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQDFPLKSNFELV 240
KCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQDFPLKSNFELV
Sbjct: 181 KCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQDFPLKSNFELV 240
Query: 241 SELKKLNGANMLETVKPPNSKLERFTYHHELRRVPYEYVKLPIRTNISKEAPPHNIQIFV 300
SELKKLNGANMLETVKPPNSKLERFTYHHELRRVPYEYVKLPIRTNISKEAPPHNIQIFV
Sbjct: 241 SELKKLNGANMLETVKPPNSKLERFTYHHELRRVPYEYVKLPIRTNISKEAPPHNIQIFV 300
Query: 301 GSAYFVLSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVPGIPGEISRSAQDVS 360
GSAYFVLSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVPGIPGEISRSAQDVS
Sbjct: 301 GSAYFVLSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVPGIPGEISRSAQDVS 360
Query: 361 DLQSKTRLVKWNYYEGFFYPSCTGSHLRSVCIYGAAELRWLIKDGHWFANKFDSKVDPIL 420
DLQSKTRLVKWNYYEGFFYPSCTGSHLRSVCIYGAAELRWLIKDGHWFANKFDSKVDPIL
Sbjct: 361 DLQSKTRLVKWNYYEGFFYPSCTGSHLRSVCIYGAAELRWLIKDGHWFANKFDSKVDPIL 420
Query: 421 IKCLAEKLEEQQRDWITLPSEKLFMDRNLTTTS 453
IKCLAEKLEEQQRDWITLPSEKLFMDRNLTTTS
Sbjct: 421 IKCLAEKLEEQQRDWITLPSEKLFMDRNLTTTS 453
>gi|4758422 glucosaminyl (N-acetyl) transferase 3, mucin type [Homo
sapiens]
Length = 438
Score = 331 bits (849), Expect = 7e-91
Identities = 179/415 (43%), Positives = 250/415 (60%), Gaps = 18/415 (4%)
Query: 25 LLSLLKLLNVRRLFPQKDIYLVEYSLSTSPFVRN-RYTHVKDEVRYEVNCSGIY--EQEP 81
LL+ + L RL D +E S S + RN Y +K + +NCSG+ +QE
Sbjct: 21 LLATVALKLSFRLKCDSDHLGLESRESQSQYCRNILYNFLKLPAKRSINCSGVTRGDQEA 80
Query: 82 L--EIGKSLEIRRRDIIDLEDDDVVAMTSDCDIYQTLRGYAQKLVSKEEKSFPIAYSLVV 139
+ I +LE++++ D +++T DC+ ++ R + Q +SKEE FPIAYS+V+
Sbjct: 81 VLQAILNNLEVKKKRE-PFTDTHYLSLTRDCEHFKAERKFIQFPLSKEEVEFPIAYSMVI 139
Query: 140 HKDAIMVERLIHAIYNQHNIYCIHYDRKAPDTFKVAMNNLAKCFSNIFIASKLEAVEYAH 199
H+ ERL+ A+Y NIYC+H D K+P+TFK A+ + CF N+FIASKL V YA
Sbjct: 140 HEKIENFERLLRAVYAPQNIYCVHVDEKSPETFKEAVKAIISCFPNVFIASKLVRVVYAS 199
Query: 200 ISRLQADLNCLSDLLKSSIQWKYVINLCGQDFPLKSNFELVSELKKLNGANMLETVKPPN 259
SR+QADLNC+ DLL+SS+ WKY +N CG DFP+KSN E+V LK LNG N +E+ PP
Sbjct: 200 WSRVQADLNCMEDLLQSSVPWKYFLNTCGTDFPIKSNAEMVQALKMLNGRNSMESEVPPK 259
Query: 260 SKLERFTYHHELRRVPYEYVKLPIRTNISKEAPPHNIQIFVGSAYFVLSQAFVKYIFNNS 319
K R+ YH E+ R TN K+ PP+N+ +F G+AY V S+ FV+++ N
Sbjct: 260 HKETRWKYHFEVVRDTLHL------TNKKKDPPPYNLTMFTGNAYIVASRDFVQHVLKNP 313
Query: 320 IVQDFFAWSKDTYSPDEHFWATLIRVPGIPGEI-SRSAQDVSDLQSKTRLVKWNYYEGFF 378
Q W KDTYSPDEH WATL R +PG + + D+SD+ S RLVKW +EG
Sbjct: 314 KSQQLIEWVKDTYSPDEHLWATLQRARWMPGSVPNHPKYDISDMTSIARLVKWQGHEGDI 373
Query: 379 -----YPSCTGSHLRSVCIYGAAELRWLIKDGHWFANKFDSKVDPILIKCLAEKL 428
Y C+G H R++C+YGA +L W++++ H ANKFD KVD ++CL E L
Sbjct: 374 DKGAPYAPCSGIHQRAICVYGAGDLNWMLQNHHLLANKFDPKVDDNALQCLEEYL 428
>gi|148277035 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 326 bits (835), Expect = 3e-89
Identities = 186/431 (43%), Positives = 256/431 (59%), Gaps = 37/431 (8%)
Query: 28 LLKLLNVRRLF--PQKDIYLV-EYSLSTSPFVRNRYTHVKDE---VRY----------EV 71
+L+ L RRLF P K ++V SL T +R H K E VR+ ++
Sbjct: 1 MLRTLLRRRLFSYPTKYYFMVLVLSLITFSVLR---IHQKPEFVSVRHLELAGENPSSDI 57
Query: 72 NCSGIYEQEPLEIGKS----LEIRRRDIIDLEDDDVVAMTSDCDIYQTLRGYAQKLVSKE 127
NC+ + + + EI K L ++ + DD + MTSDC + R Y + +SKE
Sbjct: 58 NCTKVLQGDVNEIQKVKLEILTVKFKKRPRWTPDDYINMTSDCSSFIKRRKYIVEPLSKE 117
Query: 128 EKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAPDTFKVAMNNLAKCFSNIF 187
E FPIAYS+VVH M++RL+ AIY N YCIH D K+ D++ A+ +A CFSN+F
Sbjct: 118 EAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSEDSYLAAVMGIASCFSNVF 177
Query: 188 IASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQDFPLKSNFELVSELKKLN 247
+AS+LE+V YA SR+QADLNC+ DL S WKY+INLCG DFP+K+N E+V +LK L
Sbjct: 178 VASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGMDFPIKTNLEIVRKLKLLM 237
Query: 248 GANMLETVKPPNSKLERFTYHHELRRVPYEYVKLPI-RTNISKEAPPHNIQIFVGSAYFV 306
G N LET + P+ K ER+ + YE V + T K PP +F GSAYFV
Sbjct: 238 GENNLETERMPSHKEERW-------KKRYEVVNGKLTNTGTVKMLPPLETPLFSGSAYFV 290
Query: 307 LSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVPGIPGEISRSAQ-DVSDLQSK 365
+S+ +V Y+ N +Q W++DTYSPDE+ WAT+ R+P +PG + S + D+SD+Q+
Sbjct: 291 VSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIPEVPGSLPASHKYDLSDMQAV 350
Query: 366 TRLVKWNYYEGFF-----YPSCTGSHLRSVCIYGAAELRWLIKDGHWFANKFDSKVDPIL 420
R VKW Y+EG YP C G H+RSVCI+GA +L W+++ H FANKFD VD
Sbjct: 351 ARFVKWQYFEGDVSKGAPYPPCDGVHVRSVCIFGAGDLNWMLRKHHLFANKFDVDVDLFA 410
Query: 421 IKCLAEKLEEQ 431
I+CL E L +
Sbjct: 411 IQCLDEHLRHK 421
>gi|148277033 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 326 bits (835), Expect = 3e-89
Identities = 186/431 (43%), Positives = 256/431 (59%), Gaps = 37/431 (8%)
Query: 28 LLKLLNVRRLF--PQKDIYLV-EYSLSTSPFVRNRYTHVKDE---VRY----------EV 71
+L+ L RRLF P K ++V SL T +R H K E VR+ ++
Sbjct: 1 MLRTLLRRRLFSYPTKYYFMVLVLSLITFSVLR---IHQKPEFVSVRHLELAGENPSSDI 57
Query: 72 NCSGIYEQEPLEIGKS----LEIRRRDIIDLEDDDVVAMTSDCDIYQTLRGYAQKLVSKE 127
NC+ + + + EI K L ++ + DD + MTSDC + R Y + +SKE
Sbjct: 58 NCTKVLQGDVNEIQKVKLEILTVKFKKRPRWTPDDYINMTSDCSSFIKRRKYIVEPLSKE 117
Query: 128 EKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAPDTFKVAMNNLAKCFSNIF 187
E FPIAYS+VVH M++RL+ AIY N YCIH D K+ D++ A+ +A CFSN+F
Sbjct: 118 EAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSEDSYLAAVMGIASCFSNVF 177
Query: 188 IASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQDFPLKSNFELVSELKKLN 247
+AS+LE+V YA SR+QADLNC+ DL S WKY+INLCG DFP+K+N E+V +LK L
Sbjct: 178 VASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGMDFPIKTNLEIVRKLKLLM 237
Query: 248 GANMLETVKPPNSKLERFTYHHELRRVPYEYVKLPI-RTNISKEAPPHNIQIFVGSAYFV 306
G N LET + P+ K ER+ + YE V + T K PP +F GSAYFV
Sbjct: 238 GENNLETERMPSHKEERW-------KKRYEVVNGKLTNTGTVKMLPPLETPLFSGSAYFV 290
Query: 307 LSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVPGIPGEISRSAQ-DVSDLQSK 365
+S+ +V Y+ N +Q W++DTYSPDE+ WAT+ R+P +PG + S + D+SD+Q+
Sbjct: 291 VSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIPEVPGSLPASHKYDLSDMQAV 350
Query: 366 TRLVKWNYYEGFF-----YPSCTGSHLRSVCIYGAAELRWLIKDGHWFANKFDSKVDPIL 420
R VKW Y+EG YP C G H+RSVCI+GA +L W+++ H FANKFD VD
Sbjct: 351 ARFVKWQYFEGDVSKGAPYPPCDGVHVRSVCIFGAGDLNWMLRKHHLFANKFDVDVDLFA 410
Query: 421 IKCLAEKLEEQ 431
I+CL E L +
Sbjct: 411 IQCLDEHLRHK 421
>gi|148277031 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 326 bits (835), Expect = 3e-89
Identities = 186/431 (43%), Positives = 256/431 (59%), Gaps = 37/431 (8%)
Query: 28 LLKLLNVRRLF--PQKDIYLV-EYSLSTSPFVRNRYTHVKDE---VRY----------EV 71
+L+ L RRLF P K ++V SL T +R H K E VR+ ++
Sbjct: 1 MLRTLLRRRLFSYPTKYYFMVLVLSLITFSVLR---IHQKPEFVSVRHLELAGENPSSDI 57
Query: 72 NCSGIYEQEPLEIGKS----LEIRRRDIIDLEDDDVVAMTSDCDIYQTLRGYAQKLVSKE 127
NC+ + + + EI K L ++ + DD + MTSDC + R Y + +SKE
Sbjct: 58 NCTKVLQGDVNEIQKVKLEILTVKFKKRPRWTPDDYINMTSDCSSFIKRRKYIVEPLSKE 117
Query: 128 EKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAPDTFKVAMNNLAKCFSNIF 187
E FPIAYS+VVH M++RL+ AIY N YCIH D K+ D++ A+ +A CFSN+F
Sbjct: 118 EAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSEDSYLAAVMGIASCFSNVF 177
Query: 188 IASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQDFPLKSNFELVSELKKLN 247
+AS+LE+V YA SR+QADLNC+ DL S WKY+INLCG DFP+K+N E+V +LK L
Sbjct: 178 VASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGMDFPIKTNLEIVRKLKLLM 237
Query: 248 GANMLETVKPPNSKLERFTYHHELRRVPYEYVKLPI-RTNISKEAPPHNIQIFVGSAYFV 306
G N LET + P+ K ER+ + YE V + T K PP +F GSAYFV
Sbjct: 238 GENNLETERMPSHKEERW-------KKRYEVVNGKLTNTGTVKMLPPLETPLFSGSAYFV 290
Query: 307 LSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVPGIPGEISRSAQ-DVSDLQSK 365
+S+ +V Y+ N +Q W++DTYSPDE+ WAT+ R+P +PG + S + D+SD+Q+
Sbjct: 291 VSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIPEVPGSLPASHKYDLSDMQAV 350
Query: 366 TRLVKWNYYEGFF-----YPSCTGSHLRSVCIYGAAELRWLIKDGHWFANKFDSKVDPIL 420
R VKW Y+EG YP C G H+RSVCI+GA +L W+++ H FANKFD VD
Sbjct: 351 ARFVKWQYFEGDVSKGAPYPPCDGVHVRSVCIFGAGDLNWMLRKHHLFANKFDVDVDLFA 410
Query: 421 IKCLAEKLEEQ 431
I+CL E L +
Sbjct: 411 IQCLDEHLRHK 421
>gi|148277029 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 326 bits (835), Expect = 3e-89
Identities = 186/431 (43%), Positives = 256/431 (59%), Gaps = 37/431 (8%)
Query: 28 LLKLLNVRRLF--PQKDIYLV-EYSLSTSPFVRNRYTHVKDE---VRY----------EV 71
+L+ L RRLF P K ++V SL T +R H K E VR+ ++
Sbjct: 1 MLRTLLRRRLFSYPTKYYFMVLVLSLITFSVLR---IHQKPEFVSVRHLELAGENPSSDI 57
Query: 72 NCSGIYEQEPLEIGKS----LEIRRRDIIDLEDDDVVAMTSDCDIYQTLRGYAQKLVSKE 127
NC+ + + + EI K L ++ + DD + MTSDC + R Y + +SKE
Sbjct: 58 NCTKVLQGDVNEIQKVKLEILTVKFKKRPRWTPDDYINMTSDCSSFIKRRKYIVEPLSKE 117
Query: 128 EKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAPDTFKVAMNNLAKCFSNIF 187
E FPIAYS+VVH M++RL+ AIY N YCIH D K+ D++ A+ +A CFSN+F
Sbjct: 118 EAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSEDSYLAAVMGIASCFSNVF 177
Query: 188 IASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQDFPLKSNFELVSELKKLN 247
+AS+LE+V YA SR+QADLNC+ DL S WKY+INLCG DFP+K+N E+V +LK L
Sbjct: 178 VASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGMDFPIKTNLEIVRKLKLLM 237
Query: 248 GANMLETVKPPNSKLERFTYHHELRRVPYEYVKLPI-RTNISKEAPPHNIQIFVGSAYFV 306
G N LET + P+ K ER+ + YE V + T K PP +F GSAYFV
Sbjct: 238 GENNLETERMPSHKEERW-------KKRYEVVNGKLTNTGTVKMLPPLETPLFSGSAYFV 290
Query: 307 LSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVPGIPGEISRSAQ-DVSDLQSK 365
+S+ +V Y+ N +Q W++DTYSPDE+ WAT+ R+P +PG + S + D+SD+Q+
Sbjct: 291 VSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIPEVPGSLPASHKYDLSDMQAV 350
Query: 366 TRLVKWNYYEGFF-----YPSCTGSHLRSVCIYGAAELRWLIKDGHWFANKFDSKVDPIL 420
R VKW Y+EG YP C G H+RSVCI+GA +L W+++ H FANKFD VD
Sbjct: 351 ARFVKWQYFEGDVSKGAPYPPCDGVHVRSVCIFGAGDLNWMLRKHHLFANKFDVDVDLFA 410
Query: 421 IKCLAEKLEEQ 431
I+CL E L +
Sbjct: 411 IQCLDEHLRHK 421
>gi|21614523 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 326 bits (835), Expect = 3e-89
Identities = 186/431 (43%), Positives = 256/431 (59%), Gaps = 37/431 (8%)
Query: 28 LLKLLNVRRLF--PQKDIYLV-EYSLSTSPFVRNRYTHVKDE---VRY----------EV 71
+L+ L RRLF P K ++V SL T +R H K E VR+ ++
Sbjct: 1 MLRTLLRRRLFSYPTKYYFMVLVLSLITFSVLR---IHQKPEFVSVRHLELAGENPSSDI 57
Query: 72 NCSGIYEQEPLEIGKS----LEIRRRDIIDLEDDDVVAMTSDCDIYQTLRGYAQKLVSKE 127
NC+ + + + EI K L ++ + DD + MTSDC + R Y + +SKE
Sbjct: 58 NCTKVLQGDVNEIQKVKLEILTVKFKKRPRWTPDDYINMTSDCSSFIKRRKYIVEPLSKE 117
Query: 128 EKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAPDTFKVAMNNLAKCFSNIF 187
E FPIAYS+VVH M++RL+ AIY N YCIH D K+ D++ A+ +A CFSN+F
Sbjct: 118 EAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSEDSYLAAVMGIASCFSNVF 177
Query: 188 IASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQDFPLKSNFELVSELKKLN 247
+AS+LE+V YA SR+QADLNC+ DL S WKY+INLCG DFP+K+N E+V +LK L
Sbjct: 178 VASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGMDFPIKTNLEIVRKLKLLM 237
Query: 248 GANMLETVKPPNSKLERFTYHHELRRVPYEYVKLPI-RTNISKEAPPHNIQIFVGSAYFV 306
G N LET + P+ K ER+ + YE V + T K PP +F GSAYFV
Sbjct: 238 GENNLETERMPSHKEERW-------KKRYEVVNGKLTNTGTVKMLPPLETPLFSGSAYFV 290
Query: 307 LSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVPGIPGEISRSAQ-DVSDLQSK 365
+S+ +V Y+ N +Q W++DTYSPDE+ WAT+ R+P +PG + S + D+SD+Q+
Sbjct: 291 VSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIPEVPGSLPASHKYDLSDMQAV 350
Query: 366 TRLVKWNYYEGFF-----YPSCTGSHLRSVCIYGAAELRWLIKDGHWFANKFDSKVDPIL 420
R VKW Y+EG YP C G H+RSVCI+GA +L W+++ H FANKFD VD
Sbjct: 351 ARFVKWQYFEGDVSKGAPYPPCDGVHVRSVCIFGAGDLNWMLRKHHLFANKFDVDVDLFA 410
Query: 421 IKCLAEKLEEQ 431
I+CL E L +
Sbjct: 411 IQCLDEHLRHK 421
>gi|85790495 glucosaminyl (N-acetyl) transferase 2, I-branching
enzyme isoform C [Homo sapiens]
Length = 402
Score = 284 bits (727), Expect = 1e-76
Identities = 144/323 (44%), Positives = 193/323 (59%), Gaps = 10/323 (3%)
Query: 110 CDIYQTLRGYAQKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAP 169
C Y T Y +S+EE +FP+AY +V+HKD ERL AIY N+YC+H D KAP
Sbjct: 74 CKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYMPQNVYCVHVDEKAP 133
Query: 170 DTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQ 229
+K ++ L CF N FIASK E+V YA ISRLQADLNCL DL+ S + WKYVIN CGQ
Sbjct: 134 AEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVASEVPWKYVINTCGQ 193
Query: 230 DFPLKSNFELVSELKKLNGANMLETVKPPNSKLERFTY-HHELRRVPYEYVKLPIRTNIS 288
DFPLK+N E+V LK G N+ V PP+ ++R Y H E +VK TNI
Sbjct: 194 DFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDKGGFFVK---NTNIL 250
Query: 289 KEAPPHNIQIFVGSAYFVLSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVPGI 348
K +PPH + I+ G+AY L++ FV ++ + D WSKDTYSPDEHFW TL RV G+
Sbjct: 251 KTSPPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEHFWVTLNRVSGV 310
Query: 349 PGEISRSAQDVSDLQSKTRLVKWNYYEGFFYPSCTGSHLRSVCIYGAAELRWLIKDGHWF 408
PG + ++ R +KW+ E + C G ++ +CIYG +L+WL+ F
Sbjct: 311 PGSMPNAS-----WTGNLRAIKWSDMED-RHGGCHGHYVHGICIYGNGDLKWLVNSPSLF 364
Query: 409 ANKFDSKVDPILIKCLAEKLEEQ 431
ANKF+ P+ ++CL + E+
Sbjct: 365 ANKFELNTYPLTVECLELRHRER 387
>gi|21717810 glucosaminyl (N-acetyl) transferase 2, I-branching
enzyme isoform A [Homo sapiens]
Length = 402
Score = 284 bits (727), Expect = 1e-76
Identities = 141/323 (43%), Positives = 193/323 (59%), Gaps = 10/323 (3%)
Query: 110 CDIYQTLRGYAQKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAP 169
C Y Y + +S+EE FP+AY++ +HKD ERL AIY N+YC+H D+KA
Sbjct: 74 CYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFGTFERLFRAIYMPQNVYCVHLDQKAT 133
Query: 170 DTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQ 229
D FK A+ L CF N F+ASK E+V Y ISRLQADLNCL DL+ S + WKYVIN CGQ
Sbjct: 134 DAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVASEVPWKYVINTCGQ 193
Query: 230 DFPLKSNFELVSELKKLNGANMLETVKPPNSKLERFTY-HHELRRVPYEYVKLPIRTNIS 288
DFPLK+N E+V LK G N+ V PP+ + R Y H EL YV I+T
Sbjct: 194 DFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNHKNSYV---IKTTKL 250
Query: 289 KEAPPHNIQIFVGSAYFVLSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVPGI 348
K PPH++ I+ G+AY L++ F ++ + + D +WSKDTYSPDEHFW TL R+PG+
Sbjct: 251 KTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLSWSKDTYSPDEHFWVTLNRIPGV 310
Query: 349 PGEISRSAQDVSDLQSKTRLVKWNYYEGFFYPSCTGSHLRSVCIYGAAELRWLIKDGHWF 408
PG + ++ R +KW+ E + C G ++ +CIYG +L+WL+ F
Sbjct: 311 PGSMPNAS-----WTGNLRAIKWSDMED-RHGGCHGHYVHGICIYGNGDLKWLVNSPSLF 364
Query: 409 ANKFDSKVDPILIKCLAEKLEEQ 431
ANKF+ P+ ++CL + E+
Sbjct: 365 ANKFELNTYPLTVECLELRHRER 387
>gi|4503963 glucosaminyl (N-acetyl) transferase 2, I-branching
enzyme isoform B [Homo sapiens]
Length = 400
Score = 274 bits (701), Expect = 1e-73
Identities = 142/325 (43%), Positives = 184/325 (56%), Gaps = 10/325 (3%)
Query: 108 SDCDIYQTLRGYAQKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRK 167
S C Y T Y +SKEE FP+AY +V+H RL AIY NIYC+H D K
Sbjct: 70 SSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMPQNIYCVHVDEK 129
Query: 168 APDTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLC 227
A FK A+ L CF N F+ASK+E V Y ISRLQADLNC+ DL + WKYVIN C
Sbjct: 130 ATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAFEVSWKYVINTC 189
Query: 228 GQDFPLKSNFELVSELKKLNGANMLETVKPPNSKLERFTY-HHELRRVPYEYVKLPIRTN 286
GQDFPLK+N E+V LK G N+ V PP + R Y H E YV IRT
Sbjct: 190 GQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKELSYV---IRTT 246
Query: 287 ISKEAPPHNIQIFVGSAYFVLSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVP 346
K PPHN+ I+ GSAY LS+ F ++ ++ D WSKDT+SPDEHFW TL R+P
Sbjct: 247 ALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHFWVTLNRIP 306
Query: 347 GIPGEISRSAQDVSDLQSKTRLVKWNYYEGFFYPSCTGSHLRSVCIYGAAELRWLIKDGH 406
G+PG + ++ R +KW+ E + C G ++ +CIYG +L+WL+
Sbjct: 307 GVPGSMPNAS-----WTGNLRAIKWSDMED-RHGGCHGHYVHGICIYGNGDLKWLVNSPS 360
Query: 407 WFANKFDSKVDPILIKCLAEKLEEQ 431
FANKF+ P+ ++CL + E+
Sbjct: 361 LFANKFELNTYPLTVECLELRHRER 385
>gi|190684701 glucosaminyl (N-acetyl) transferase family member 7
[Homo sapiens]
Length = 430
Score = 246 bits (627), Expect = 4e-65
Identities = 123/305 (40%), Positives = 179/305 (58%), Gaps = 8/305 (2%)
Query: 124 VSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAPDTFKVAMNNLAKCF 183
+S EE F +AY + +HK+ M +L+ AIY N+YCIH D KAP +K A+ L CF
Sbjct: 102 LSAEEGDFSLAYIITIHKELAMFVQLLRAIYVPQNVYCIHVDEKAPMKYKTAVQTLVNCF 161
Query: 184 SNIFIASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQDFPLKSNFELVSEL 243
N+FI+SK E V YA +RLQAD+NC+ L+ S QW YVINLCGQDFP+K+N E++ +
Sbjct: 162 ENVFISSKTEKVAYAGFTRLQADINCMKVLVHSKFQWNYVINLCGQDFPIKTNREIIHYI 221
Query: 244 K-KLNGANMLETVKPPNSKLERFTYHHELRRVPYEYVKLPIRTNISKEAPPHNIQIFVGS 302
+ K + N+ V P ++ T L VP + P N K+ PPHN+ I+ GS
Sbjct: 222 RSKWSDKNITPGVIQP-LHIKSKTSQSHLEFVPKGSIYAP-PNNRFKDKPPHNLTIYFGS 279
Query: 303 AYFVLSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVPGIPGEISRSAQDVSDL 362
AY+VL++ FV++I + +D WSKD SP++H+W TL R+ PG A +
Sbjct: 280 AYYVLTRKFVEFILTDIHAKDMLQWSKDIRSPEQHYWVTLNRLKDAPG-----ATPNAGW 334
Query: 363 QSKTRLVKWNYYEGFFYPSCTGSHLRSVCIYGAAELRWLIKDGHWFANKFDSKVDPILIK 422
+ R +K EG + C G ++ +C+YG +L WLI+ FANKF+ DP+++
Sbjct: 335 EGNVRAIKRKSEEGNVHDGCKGRYVEDICVYGPGDLPWLIQSPSLFANKFEPSTDPLVVT 394
Query: 423 CLAEK 427
CL +
Sbjct: 395 CLERR 399
>gi|239754233 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
sapiens]
Length = 391
Score = 183 bits (465), Expect = 2e-46
Identities = 96/238 (40%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 110 CDIYQTLRGYAQKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAP 169
C Y Y +S EE +FP+AY + + +D E L AIY N+YCIH D+ A
Sbjct: 76 CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
Query: 170 DTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQ 229
FK+A++ L +CFSN FI+S+ E + Y SRLQADL C+ DL+ S++QW+YV N
Sbjct: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
Query: 230 DFPLKSNFELVSELKKLNGANMLETVKPPNSKLERFTY-HHELRRVPYEYVKLPIRTNIS 288
DFPLK+N E+V LK +N N+ + ER Y H E R + +V ++ +
Sbjct: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFV---LKKHKK 252
Query: 289 KEAPPHNIQIFVGSAYFVLSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVP 346
K PP ++I GS+Y L++ FV + N I + S+DTYSPD+HFW TL +P
Sbjct: 253 KSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIP 310
>gi|239748765 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
sapiens]
Length = 391
Score = 183 bits (465), Expect = 2e-46
Identities = 96/238 (40%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 110 CDIYQTLRGYAQKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAP 169
C Y Y +S EE +FP+AY + + +D E L AIY N+YCIH D+ A
Sbjct: 76 CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
Query: 170 DTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQ 229
FK+A++ L +CFSN FI+S+ E + Y SRLQADL C+ DL+ S++QW+YV N
Sbjct: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
Query: 230 DFPLKSNFELVSELKKLNGANMLETVKPPNSKLERFTY-HHELRRVPYEYVKLPIRTNIS 288
DFPLK+N E+V LK +N N+ + ER Y H E R + +V ++ +
Sbjct: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFV---LKKHKK 252
Query: 289 KEAPPHNIQIFVGSAYFVLSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVP 346
K PP ++I GS+Y L++ FV + N I + S+DTYSPD+HFW TL +P
Sbjct: 253 KSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIP 310
>gi|239742810 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
sapiens]
Length = 391
Score = 183 bits (465), Expect = 2e-46
Identities = 96/238 (40%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 110 CDIYQTLRGYAQKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAP 169
C Y Y +S EE +FP+AY + + +D E L AIY N+YCIH D+ A
Sbjct: 76 CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
Query: 170 DTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQ 229
FK+A++ L +CFSN FI+S+ E + Y SRLQADL C+ DL+ S++QW+YV N
Sbjct: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
Query: 230 DFPLKSNFELVSELKKLNGANMLETVKPPNSKLERFTY-HHELRRVPYEYVKLPIRTNIS 288
DFPLK+N E+V LK +N N+ + ER Y H E R + +V ++ +
Sbjct: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFV---LKKHKK 252
Query: 289 KEAPPHNIQIFVGSAYFVLSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVP 346
K PP ++I GS+Y L++ FV + N I + S+DTYSPD+HFW TL +P
Sbjct: 253 KSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIP 310
>gi|110611246 xylosyltransferase II [Homo sapiens]
Length = 865
Score = 80.5 bits (197), Expect = 3e-15
Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 29/303 (9%)
Query: 133 IAYSLVVHKDAI-MVERLIHAIYNQHNIYCIHYDRKAPDTFKVAMNNLAKCFSNIFIASK 191
IAY LVVH AI ++RL+ A+Y++ + + IH D+++ D + LA+ + N+ +
Sbjct: 234 IAYMLVVHGRAIRQLKRLLKAVYHEQHFFYIHVDKRS-DYLHREVVELAQGYDNVRVTPW 292
Query: 192 LEAVEYAHISRLQADLNCLSDLLK-SSIQWKYVINLCGQDFPLKSNFELVSELKKLNGAN 250
+ S L+ L + DLL+ W + INL D+P ++N ELV+ L K N
Sbjct: 293 RMVTIWGGASLLRMYLRSMRDLLEVPGWAWDFFINLSATDYPTRTNEELVAFLSKNRDKN 352
Query: 251 MLETVKPPNSKLERFTYHHELRRVPYEYVKLPIRTNISKEAPPHNIQIFVGSAYFVLSQA 310
L++ NS RF L R+ +E R + + P I + GS +FVL+++
Sbjct: 353 FLKSHGRDNS---RFIKKQGLDRLFHECDSHMWR--LGERQIPAGIVVDGGSDWFVLTRS 407
Query: 311 FVKYIF--NNSIVQDFFAWSKDTYSPDEHFWATLIRVPGIPGEISRSAQDVSDLQSKTRL 368
FV+Y+ ++ +V + T P E F+ T++ E S + + + D + R+
Sbjct: 408 FVEYVVYTDDPLVAQLRQFYTYTLLPAESFFHTVL-------ENSLACETLVD--NNLRV 458
Query: 369 VKWNYYEGFFYPSCTGSHLRSVCIYGAAELR-------WLIKDGHWFANKFDSKVDPILI 421
WN G C H+ C + + + +FA KF+S V+ ++
Sbjct: 459 TNWNRKLGC---KCQYKHIVDWCGCSPNDFKPQDFLRLQQVSRPTFFARKFESTVNQEVL 515
Query: 422 KCL 424
+ L
Sbjct: 516 EIL 518
>gi|28269693 xylosyltransferase I [Homo sapiens]
Length = 959
Score = 73.2 bits (178), Expect = 5e-13
Identities = 82/327 (25%), Positives = 144/327 (44%), Gaps = 41/327 (12%)
Query: 116 LRGYAQKLVSKEEKSFP--------IAYSLVVHKDAI-MVERLIHAIYNQHNIYCIHYDR 166
L G A K V +E S IA+ LVVH A ++R+ AIY++ + Y IH D+
Sbjct: 303 LEGKANKNVQWDEDSVEYMPANPVRIAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDK 362
Query: 167 KAPDTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLK-SSIQWKYVIN 225
++ + + +++ +SN+ + A + S L L + DLL+ + W + IN
Sbjct: 363 RSNYLHRQVLQ-VSRQYSNVRVTPWRMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFIN 421
Query: 226 LCGQDFPLKSNFELVSELKKLNGANMLETVKPPNSKLERFTYHHELRRVPYEYVKLPIRT 285
L D+P+++N +LV+ L + N L++ N+ RF L R+ E R
Sbjct: 422 LSAADYPIRTNDQLVAFLSRYRDMNFLKSHGRDNA---RFIRKQGLDRLFLECDAHMWR- 477
Query: 286 NISKEAPPHNIQIFVGSAYFVLSQAFVKYI--FNNSIVQDFFAWSKDTYSPDEHFWATLI 343
+ P I + GS +F+L++ FV+Y+ + +V + T P E F+ T+
Sbjct: 478 -LGDRRIPEGIAVDGGSDWFLLNRRFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTV- 535
Query: 344 RVPGIPGEISRSAQDVSDLQSKTRLVKWNYYEGFFYPSCTGSHLRSVCIYGAAELRWLIK 403
+ S + + + R+ WN G C H+ C G + + +
Sbjct: 536 --------LENSPHCDTMVDNNLRITNWNRKLGC---KCQYKHIVDWC--GCSPNDFKPQ 582
Query: 404 DGH---------WFANKFDSKVDPILI 421
D H +FA KF++ V+ +I
Sbjct: 583 DFHRFQQTARPTFFARKFEAVVNQEII 609
>gi|4758012 clathrin heavy chain 1 [Homo sapiens]
Length = 1675
Score = 35.4 bits (80), Expect = 0.11
Identities = 42/147 (28%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 157 HNIYCIHYDRKAPDTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKS 216
+N++ D +A T A +N F NI +A +LE E R+ A L K
Sbjct: 1468 NNLFITEEDYQALRTSIDAYDN----FDNISLAQRLEKHELIEFRRIAAYL------FKG 1517
Query: 217 SIQWKYVINLCGQDFPLKSNFELVSELKKLNGANMLETVKPPNSKLE-----RFTYHHEL 271
+ +WK + LC +D K + SE K A L K E FT + L
Sbjct: 1518 NNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLL 1577
Query: 272 RRVPYEYVKLPIRTNISKEAPPHNIQI 298
R P ++ R NI A P+ IQ+
Sbjct: 1578 R--PDVVLETAWRHNIMDFAMPYFIQV 1602
>gi|197333737 guanylate-binding protein 5 [Homo sapiens]
Length = 586
Score = 31.6 bits (70), Expect = 1.5
Identities = 24/118 (20%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 104 VAMTSDCDIYQTLRGYAQKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIH 163
V + + +Y+T + Y ++ + K F +A ++ H I + + H + H + +
Sbjct: 38 VVVVAIVGLYRTGKSYLMNKLAGKNKGFSVASTVQSHTKGIWIWCVPHPNWPNHTLVLLD 97
Query: 164 YD-----RKAPDTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKS 216
+ KA + + + LA S+ F+ + + ++ I L ++ L+DLLK+
Sbjct: 98 TEGLGDVEKADNKNDIQIFALALLLSSTFVYNTVNKIDQGAIDLLH-NVTELTDLLKA 154
>gi|16418425 guanylate-binding protein 5 [Homo sapiens]
Length = 586
Score = 31.6 bits (70), Expect = 1.5
Identities = 24/118 (20%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 104 VAMTSDCDIYQTLRGYAQKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIH 163
V + + +Y+T + Y ++ + K F +A ++ H I + + H + H + +
Sbjct: 38 VVVVAIVGLYRTGKSYLMNKLAGKNKGFSVASTVQSHTKGIWIWCVPHPNWPNHTLVLLD 97
Query: 164 YD-----RKAPDTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKS 216
+ KA + + + LA S+ F+ + + ++ I L ++ L+DLLK+
Sbjct: 98 TEGLGDVEKADNKNDIQIFALALLLSSTFVYNTVNKIDQGAIDLLH-NVTELTDLLKA 154
>gi|117956387 hypothetical protein LOC80133 [Homo sapiens]
Length = 573
Score = 31.2 bits (69), Expect = 2.0
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 34 VRRLFPQ---KDIYLVEYSLSTSPFVRNRYTHVKDEVRYEVNCSGIYEQEPLEIGKSLEI 90
V + FPQ ++ V Y+ P +++R + +D +R +NCSG+ + + + +
Sbjct: 416 VAQYFPQLLTTLMFQVFYNSELKPILKDRALYAQDALRVLLNCSGLQQVD-------ITL 468
Query: 91 RRRDIIDLEDDDVVAMTSDCDIYQTLRGY 119
+ + D +D+ C I +TL Y
Sbjct: 469 MKENFWDQLSEDLCYYHGVCFIAKTLSEY 497
>gi|8922854 kelch-like 26 [Homo sapiens]
Length = 615
Score = 30.4 bits (67), Expect = 3.4
Identities = 19/92 (20%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 195 VEYAHISRLQADLNCLSDLLKSSI--QWKYVINLCGQDFPLKSNFELVSELKKLNGANML 252
+++A+ + + DL+C+ D+L +++ Q V+ LC + + E + ++ L
Sbjct: 118 IDFAYSAEVTLDLDCVQDVLGAAVFLQMLPVVELCEEFLKAAMSVETCLNIGQMATTFSL 177
Query: 253 ETVKPPNSKLERFTYHHELRRVPYE-YVKLPI 283
+++ ++ FT+ H L+ E +++LP+
Sbjct: 178 ASLR---ESVDAFTFRHFLQIAEEEDFLRLPL 206
>gi|56682953 epidermal growth factor receptor pathway substrate 8
[Homo sapiens]
Length = 822
Score = 29.6 bits (65), Expect = 5.9
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 20/104 (19%)
Query: 196 EYAHISRLQADLNCLSD----LLKSSIQWKYVINLCGQDFPLKSNFELVSELKKLNGANM 251
+Y ++R ++L+ L D +L QW V N G + +N +
Sbjct: 539 KYDFVARNNSELSVLKDDILEILDDRKQWWKVRNASGDSGFVPNN--------------I 584
Query: 252 LETVKPPNSKLERF--TYHHELRRVPYEYVKLPIRTNISKEAPP 293
L+ V+PP S L R Y H +++ EY P T + PP
Sbjct: 585 LDIVRPPESGLGRADPPYTHTIQKQRMEYGPRPADTPPAPSPPP 628
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.138 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,428,218
Number of Sequences: 37866
Number of extensions: 684138
Number of successful extensions: 1457
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1407
Number of HSP's gapped (non-prelim): 22
length of query: 453
length of database: 18,247,518
effective HSP length: 106
effective length of query: 347
effective length of database: 14,233,722
effective search space: 4939101534
effective search space used: 4939101534
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.