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Search of human proteins with 7705421
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7705421 hydroxysteroid (17-beta) dehydrogenase 7 [Homo
sapiens]
(341 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7705421 hydroxysteroid (17-beta) dehydrogenase 7 [Homo sapiens] 680 0.0
gi|7706523 WW domain-containing oxidoreductase isoform 1 [Homo s... 81 1e-15
gi|10190746 retinol dehydrogenase 14 (all-trans and 9-cis) [Homo... 77 3e-14
gi|225579078 retinol dehydrogenase 13 isoform 1 [Homo sapiens] 67 2e-11
gi|193804850 dehydrogenase/reductase (SDR family) X-linked [Homo... 65 9e-11
gi|166795268 retinol dehydrogenase 11 [Homo sapiens] 62 1e-09
gi|186928839 retinol dehydrogenase 12 [Homo sapiens] 59 5e-09
gi|20149619 dehydrogenase/reductase (SDR family) member 7B [Homo... 53 3e-07
gi|59889578 dehydrogenase/reductase (SDR family) member 10 [Homo... 47 2e-05
gi|19923931 retinol dehydrogenase 13 isoform 2 [Homo sapiens] 47 2e-05
gi|146231950 dehydrogenase/reductase (SDR family) member 13 [Hom... 43 5e-04
gi|223718074 hydroxysteroid (17-beta) dehydrogenase 1 [Homo sapi... 42 6e-04
gi|224922801 hydroxyprostaglandin dehydrogenase 15-(NAD) isoform... 42 6e-04
gi|31542939 hydroxyprostaglandin dehydrogenase 15-(NAD) isoform ... 42 6e-04
gi|4502599 carbonyl reductase 1 [Homo sapiens] 42 8e-04
gi|7657478 retinol dehydrogenase 8 (all-trans) [Homo sapiens] 42 0.001
gi|18860884 WW domain-containing oxidoreductase isoform 2 [Homo ... 40 0.003
gi|4502601 carbonyl reductase 3 [Homo sapiens] 38 0.011
gi|40548397 NADP-dependent retinol dehydrogenase/reductase [Homo... 38 0.011
gi|210032110 hydroxysteroid (17-beta) dehydrogenase 13 isoform A... 38 0.011
gi|214010158 NADP-dependent retinol dehydrogenase/reductase [Hom... 38 0.011
gi|214010156 NADP-dependent retinol dehydrogenase/reductase [Hom... 38 0.011
gi|22758144 NADP-dependent retinol dehydrogenase/reductase [Homo... 38 0.011
gi|7706318 dehydrogenase/reductase (SDR family) member 7 [Homo s... 37 0.019
gi|19923817 peroxisomal trans-2-enoyl-CoA reductase [Homo sapiens] 37 0.019
gi|4758504 hydroxysteroid (17-beta) dehydrogenase 10 isoform 1 [... 37 0.033
gi|150247226 retinol dehydrogenase 16 [Homo sapiens] 37 0.033
gi|83715985 hydroxysteroid (17-beta) dehydrogenase 10 isoform 2 ... 36 0.043
gi|4504503 hydroxysteroid (17-beta) dehydrogenase 2 [Homo sapiens] 36 0.057
gi|109715829 short-chain dehydrogenase/reductase [Homo sapiens] 36 0.057
>gi|7705421 hydroxysteroid (17-beta) dehydrogenase 7 [Homo sapiens]
Length = 341
Score = 680 bits (1754), Expect = 0.0
Identities = 341/341 (100%), Positives = 341/341 (100%)
Query: 1 MRKVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIV 60
MRKVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIV
Sbjct: 1 MRKVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIV 60
Query: 61 QVDVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTA 120
QVDVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTA
Sbjct: 61 QVDVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTA 120
Query: 121 EGLLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFS 180
EGLLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFS
Sbjct: 121 EGLLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFS 180
Query: 181 LEDFQHSKGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNLTYGILPPFIW 240
LEDFQHSKGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNLTYGILPPFIW
Sbjct: 181 LEDFQHSKGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNLTYGILPPFIW 240
Query: 241 TLLMPAILLLRFFANAFTLTPYNGTEALVWLFHQKPESLNPLIKYLSATTGFGRNYIMTQ 300
TLLMPAILLLRFFANAFTLTPYNGTEALVWLFHQKPESLNPLIKYLSATTGFGRNYIMTQ
Sbjct: 241 TLLMPAILLLRFFANAFTLTPYNGTEALVWLFHQKPESLNPLIKYLSATTGFGRNYIMTQ 300
Query: 301 KMDLDEDTAEKFYQKLLELEKHIRVTIQKTDNQARLSGSCL 341
KMDLDEDTAEKFYQKLLELEKHIRVTIQKTDNQARLSGSCL
Sbjct: 301 KMDLDEDTAEKFYQKLLELEKHIRVTIQKTDNQARLSGSCL 341
>gi|7706523 WW domain-containing oxidoreductase isoform 1 [Homo
sapiens]
Length = 414
Score = 81.3 bits (199), Expect = 1e-15
Identities = 77/279 (27%), Positives = 116/279 (41%), Gaps = 53/279 (18%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
KVV++TGA+SGIG K H+ LACRNM++A + +L A+V + +
Sbjct: 125 KVVVVTGANSGIGFETAKSFALHG--AHVILACRNMARASEAVSRILEEWHKAKVEAMTL 182
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTAEG 122
D++ L+SV ++ K + L + NA P
Sbjct: 183 DLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPW------------------------ 218
Query: 123 LLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKS--NFS 180
+T DGL+ F+ N GHF L++ L+ +LC S P+++I SS S R + N S
Sbjct: 219 ------SLTKDGLETTFQVNHLGHFYLVQLLQDVLCRS-APARVIVVSSESHRFTDINDS 271
Query: 181 LEDFQHSK---------GKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNLT 231
L S+ Y+ SK L S L+R + +G+ SN PG N+
Sbjct: 272 LGKLDFSRLSPTKNDYWAMLAYNRSKLCNILFSNELHRRLSPRGVTSNAVHPG----NMM 327
Query: 232 YGILPPFIWTLLMPAILLLRFFANAFTLTPYNGTEALVW 270
Y + W LL A FT + G V+
Sbjct: 328 YSNIHRSWW-----VYTLLFTLARPFTKSMQQGAATTVY 361
>gi|10190746 retinol dehydrogenase 14 (all-trans and 9-cis) [Homo
sapiens]
Length = 336
Score = 76.6 bits (187), Expect = 3e-14
Identities = 78/285 (27%), Positives = 116/285 (40%), Gaps = 55/285 (19%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAE-------------AVCAALL 49
K VLITGA+SG+G A LL + + CR+ ++AE A C
Sbjct: 44 KTVLITGANSGLGRATAAELLRLG--ARVIMGCRDRARAEEAAGQLRRELRQAAECGPEP 101
Query: 50 ASHPTAEVTIVQVDVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLF 109
E+ + ++D+++L+SV +E+ Q RLD + NAGI P +
Sbjct: 102 GVSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMK--------- 152
Query: 110 SRKVIHMFSTAEGLLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWT 169
T DG + F N GHF+L L LL S PS+++
Sbjct: 153 ---------------------TEDGFEMQFGVNHLGHFLLTNLLLGLL-KSSAPSRIVVV 190
Query: 170 SSRSARKSNFSLEDFQHSKGKEP---YSSSKYATDLLSVALNRNFNQQGLYSNVACPGTA 226
SS+ + + + +D + YS SK A L + L R + NV PG
Sbjct: 191 SSKLYKYGDINFDDLNSEQSYNKSFCYSRSKLANILFTRELARRLEGTNVTVNVLHPGIV 250
Query: 227 LTNLTYGILPPFIWTLLMPAILLLRFFANAFTLTPYNGTEALVWL 271
TNL I P L+ P L+ + AF TP G + ++L
Sbjct: 251 RTNLGRHIHIPL---LVKPLFNLVSW---AFFKTPVEGAQTSIYL 289
>gi|225579078 retinol dehydrogenase 13 isoform 1 [Homo sapiens]
Length = 331
Score = 67.4 bits (163), Expect = 2e-11
Identities = 60/232 (25%), Positives = 94/232 (40%), Gaps = 37/232 (15%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
K V++TGA++GIG L ++ LACR+M K EA + V +
Sbjct: 39 KTVIVTGANTGIGKQTALELARRGG--NIILACRDMEKCEAAAKDIRGETLNHHVNARHL 96
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTAEG 122
D+++L+S+ + ++ + +R+D + NAG+M P
Sbjct: 97 DLASLKSIREFAAKIIEEEERVDILINNAGVMRCPHWT---------------------- 134
Query: 123 LLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFSLE 182
T DG + F N GHF+L L L + PS++I SS + + +
Sbjct: 135 --------TEDGFEMQFGVNHLGHFLLTNLLLDKL-KASAPSRIINLSSLAHVAGHIDFD 185
Query: 183 DF----QHSKGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNL 230
D + K Y SK A L + L+R G+ N PG A T L
Sbjct: 186 DLNWQTRKYNTKAAYCQSKLAIVLFTKELSRRLQGSGVTVNALHPGVARTEL 237
>gi|193804850 dehydrogenase/reductase (SDR family) X-linked [Homo
sapiens]
Length = 330
Score = 65.1 bits (157), Expect = 9e-11
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 40/236 (16%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
+V ++TG + GIG + K L +H+ +A N SKA+ V + + +V +
Sbjct: 44 RVAIVTGGTDGIGYSTAKHLARLG--MHVIIAGNNDSKAKQVVSKIKEETLNDKVEFLYC 101
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTAEG 122
D++++ S+ + ++ K + L + NAG+M PQ
Sbjct: 102 DLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQ------------------------ 137
Query: 123 LLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNP---SQLIWTSSRSARKSNF 179
+ T DG +E F N GHF+L L L S +P ++++ SS + +
Sbjct: 138 ------RKTRDGFEEHFGLNYLGHFLLTNLLLDTLKESGSPGHSARVVTVSSATHYVAEL 191
Query: 180 SLEDFQHSKGKEP---YSSSKYATDLLSVALNRNFNQQGLY--SNVACPGTALTNL 230
+++D Q S P Y+ SK A L + L R +G + +NV PG T++
Sbjct: 192 NMDDLQSSACYSPHAAYAQSKLALVLFTYHLQRLLAAEGSHVTANVVDPGVVNTDV 247
>gi|166795268 retinol dehydrogenase 11 [Homo sapiens]
Length = 318
Score = 61.6 bits (148), Expect = 1e-09
Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 36/231 (15%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
KVV++TGA++GIG K L ++L ACR++ K E V + + +V + ++
Sbjct: 42 KVVVVTGANTGIGKETAKELAQRGARVYL--ACRDVEKGELVAKEIQTTTGNQQVLVRKL 99
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTAEG 122
D+S+ +S+ +K + L + NAG+M P +S+
Sbjct: 100 DLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCP-----------YSK----------- 137
Query: 123 LLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFSLE 182
TADG + N GHF+L L L S PS+++ SS +
Sbjct: 138 --------TADGFEMHIGVNHLGHFLLTHLLLEKLKES-APSRIVNVSSLAHHLGRIHFH 188
Query: 183 DFQHSK---GKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNL 230
+ Q K Y SK A L + L R G+ + PGT + L
Sbjct: 189 NLQGEKFYNAGLAYCHSKLANILFTQELARRLKGSGVTTYSVHPGTVQSEL 239
>gi|186928839 retinol dehydrogenase 12 [Homo sapiens]
Length = 316
Score = 59.3 bits (142), Expect = 5e-09
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 37/253 (14%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
KVV+ITGA++GIG + L + +++ ACR++ K E+ + + ++V + ++
Sbjct: 40 KVVVITGANTGIGKETARELASRGARVYI--ACRDVLKGESAASEIRVDTKNSQVLVRKL 97
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTAEG 122
D+S+ +S+ ++ ++L + NAG+M P +S+
Sbjct: 98 DLSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCP-----------YSK----------- 135
Query: 123 LLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFSLE 182
TADG + N GHF+L L L S P++++ SS +
Sbjct: 136 --------TADGFETHLGVNHLGHFLLTYLLLERLKVS-APARVVNVSSVAHHIGKIPFH 186
Query: 183 DFQHSKGKE---PYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNLT-YGILPPF 238
D Q K Y SK A L + L + G+ + PG + L + L
Sbjct: 187 DLQSEKRYSRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGVVRSELVRHSSLLCL 246
Query: 239 IWTLLMPAILLLR 251
+W L P + R
Sbjct: 247 LWRLFSPFVKTAR 259
>gi|20149619 dehydrogenase/reductase (SDR family) member 7B [Homo
sapiens]
Length = 325
Score = 53.1 bits (126), Expect = 3e-07
Identities = 62/232 (26%), Positives = 91/232 (39%), Gaps = 44/232 (18%)
Query: 4 VVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVT----I 59
VV+ITGA+SG+G K A +L LC RN E + L ASH T T +
Sbjct: 54 VVVITGATSGLGKECAKVFYAAGAKLVLC--GRNGGALEELIRELTASHATKVQTHKPYL 111
Query: 60 VQVDVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFST 119
V D+++ ++ A+ E+ Q F +D + NAGI +
Sbjct: 112 VTFDLTDSGAIVAAAAEILQCFGYVDILVNNAGI-------------------------S 146
Query: 120 AEGLLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNF 179
G + T D + V ETN FG L + L P + ++ SS + S
Sbjct: 147 YRGTIMD---TTVDVDKRVMETNYFGPVALTKALLPSMI-KRRQGHIVAISSIQGKMS-- 200
Query: 180 SLEDFQHSKGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNLT 231
+ Y++SK+AT L Q + V PG TNL+
Sbjct: 201 -------IPFRSAYAASKHATQAFFDCLRAEMEQYEIEVTVISPGYIHTNLS 245
>gi|59889578 dehydrogenase/reductase (SDR family) member 10 [Homo
sapiens]
Length = 270
Score = 47.4 bits (111), Expect = 2e-05
Identities = 55/232 (23%), Positives = 87/232 (37%), Gaps = 54/232 (23%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
KVV++TG GIG + + + + +C K E+ AL P A +
Sbjct: 10 KVVVVTGGGRGIGAGIVRAFVNSGARVVIC------DKDESGGRALEQELPGA--VFILC 61
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTAEG 122
DV+ V E +RF RLDC+ NAG P PQ
Sbjct: 62 DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQ------------------------ 97
Query: 123 LLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSD----NPSQLIWTSSRSARKSN 178
+ ++ +A G +++ E N+ G + L + P L S N S L+ ++
Sbjct: 98 ---RPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ---- 150
Query: 179 FSLEDFQHSKGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNL 230
PY ++K A ++ AL + + G+ N PG T L
Sbjct: 151 -----------AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL 191
>gi|19923931 retinol dehydrogenase 13 isoform 2 [Homo sapiens]
Length = 260
Score = 47.0 bits (110), Expect = 2e-05
Identities = 47/197 (23%), Positives = 74/197 (37%), Gaps = 35/197 (17%)
Query: 38 MSKAEAVCAALLASHPTAEVTIVQVDVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNP 97
M K EA + V +D+++L+S+ + ++ + +R+D + NAG+M P
Sbjct: 1 MEKCEAAAKDIRGETLNHHVNARHLDLASLKSIREFAAKIIEEEERVDILINNAGVMRCP 60
Query: 98 QLNIKALFFGLFSRKVIHMFSTAEGLLTQGDKITADGLQEVFETNVFGHFILIRELEPLL 157
T DG + F N GHF+L L L
Sbjct: 61 HWT------------------------------TEDGFEMQFGVNHLGHFLLTNLLLDKL 90
Query: 158 CHSDNPSQLIWTSSRSARKSNFSLEDF----QHSKGKEPYSSSKYATDLLSVALNRNFNQ 213
+ PS++I SS + + +D + K Y SK A L + L+R
Sbjct: 91 -KASAPSRIINLSSLAHVAGHIDFDDLNWQTRKYNTKAAYCQSKLAIVLFTKELSRRLQG 149
Query: 214 QGLYSNVACPGTALTNL 230
G+ N PG A T L
Sbjct: 150 SGVTVNALHPGVARTEL 166
>gi|146231950 dehydrogenase/reductase (SDR family) member 13 [Homo
sapiens]
Length = 377
Score = 42.7 bits (99), Expect = 5e-04
Identities = 57/255 (22%), Positives = 93/255 (36%), Gaps = 41/255 (16%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
+ ++TGA+SGIG L + LACR+ + EA L EV + +
Sbjct: 37 RTAVVTGANSGIGKMTALELARRG--ARVVLACRSQERGEAAAFDLRQESGNNEVIFMAL 94
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTAEG 122
D+++L SV + RLD + NAGI +
Sbjct: 95 DLASLASVRAFATAFLSSEPRLDILIHNAGISSCGR------------------------ 130
Query: 123 LLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFSLE 182
T + + N G F+L L P L + PS+++ +S + + +
Sbjct: 131 --------TREAFNLLLRVNHIGPFLLTHLLLPCL-KACAPSRVVVVASAAHCRGRLDFK 181
Query: 183 DFQH-----SKGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNLTYGILPP 237
+ Y+ +K A L + L G+ A PG + L +P
Sbjct: 182 RLDRPVVGWRQELRAYADTKLANVLFARELANQLEATGVTCYAAHPGPVNSELFLRHVPG 241
Query: 238 FIWTLLMP-AILLLR 251
++ LL P A L+LR
Sbjct: 242 WLRPLLRPLAWLVLR 256
>gi|223718074 hydroxysteroid (17-beta) dehydrogenase 1 [Homo
sapiens]
Length = 328
Score = 42.4 bits (98), Expect = 6e-04
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 2 RKVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVC--AALLASHPTAEVTI 59
R VVLITG SSGIGL L RL ++ + A K + AA + P +
Sbjct: 3 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 62
Query: 60 VQVDVSNLQSVFRASKELKQRFQRLDCIYLNAGI 93
+Q+DV + +SV A + + + R+D + NAG+
Sbjct: 63 LQLDVRDSKSVAAARERVTE--GRVDVLVCNAGL 94
>gi|224922801 hydroxyprostaglandin dehydrogenase 15-(NAD) isoform
2 [Homo sapiens]
Length = 178
Score = 42.4 bits (98), Expect = 6e-04
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
KV L+TGA+ GIG A + LL + + + L N+ AAL + +Q
Sbjct: 6 KVALVTGAAQGIGRAFAEALLLKGAK--VALVDWNLEAGVQCKAALDEQFEPQKTLFIQC 63
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGI 93
DV++ Q + +++ F RLD + NAG+
Sbjct: 64 DVADQQQLRDTFRKVVDHFGRLDILVNNAGV 94
>gi|31542939 hydroxyprostaglandin dehydrogenase 15-(NAD) isoform 1
[Homo sapiens]
Length = 266
Score = 42.4 bits (98), Expect = 6e-04
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
KV L+TGA+ GIG A + LL + + + L N+ AAL + +Q
Sbjct: 6 KVALVTGAAQGIGRAFAEALLLKGAK--VALVDWNLEAGVQCKAALDEQFEPQKTLFIQC 63
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGI 93
DV++ Q + +++ F RLD + NAG+
Sbjct: 64 DVADQQQLRDTFRKVVDHFGRLDILVNNAGV 94
>gi|4502599 carbonyl reductase 1 [Homo sapiens]
Length = 277
Score = 42.0 bits (97), Expect = 8e-04
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 19/117 (16%)
Query: 4 VVLITGASSGIGLALCK---RLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIV 60
V L+TG + GIGLA+ + RL + D + L R++++ +A L A +
Sbjct: 7 VALVTGGNKGIGLAIVRDLCRLFSGD----VVLTARDVTRGQAAVQQLQAEGLSPRFH-- 60
Query: 61 QVDVSNLQSVFRASKELKQRFQRLDCIYLNAGIM-----PNP-----QLNIKALFFG 107
Q+D+ +LQS+ L++ + LD + NAGI P P ++ +K FFG
Sbjct: 61 QLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFG 117
>gi|7657478 retinol dehydrogenase 8 (all-trans) [Homo sapiens]
Length = 311
Score = 41.6 bits (96), Expect = 0.001
Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 45/228 (19%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLA-CRNMSKAEAVCAALLASHPTAE-VTIV 60
+ VLI+G SSGIGL L +L + + + +A R++ K E + AA A + +T+
Sbjct: 6 RTVLISGCSSGIGLELAVQLAHDPKKRYQVVATMRDLGKKETLEAA--AGEALGQTLTVA 63
Query: 61 QVDVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTA 120
Q+DV + +SV Q L CI ++ N +
Sbjct: 64 QLDVCSDESV----------AQCLSCIQGEVDVLVN---------------------NAG 92
Query: 121 EGLLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFS 180
GL+ + ++ +Q VF+TN FG L++ + P + ++ +S + F+
Sbjct: 93 MGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKAVLPGMKRRRQGHIVVISSVMGLQGVIFN 152
Query: 181 LEDFQHSKGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALT 228
+ Y++SK+A + +L Q ++ ++ PG +T
Sbjct: 153 ----------DVYAASKFALEGFFESLAIQLLQFNIFISLVEPGPVVT 190
>gi|18860884 WW domain-containing oxidoreductase isoform 2 [Homo
sapiens]
Length = 189
Score = 40.0 bits (92), Expect = 0.003
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLAS-----HPTAEV 57
KVV++TGA+SGIG K H+ LACRNM++A + +L HP E
Sbjct: 125 KVVVVTGANSGIGFETAKSFALHG--AHVILACRNMARASEAVSRILEEWKTKYHPPPEK 182
Query: 58 TIVQV 62
+++
Sbjct: 183 CRIKI 187
>gi|4502601 carbonyl reductase 3 [Homo sapiens]
Length = 277
Score = 38.1 bits (87), Expect = 0.011
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
+V L+TGA+ GIGLA+ + L + + L R++++ +A L A + Q+
Sbjct: 6 RVALVTGANRGIGLAIARELCRQFSG-DVVLTARDVARGQAAVQQLQAEGLSPR--FHQL 62
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGI 93
D+ +LQS+ L++ + L+ + NA +
Sbjct: 63 DIDDLQSIRALRDFLRKEYGGLNVLVNNAAV 93
>gi|40548397 NADP-dependent retinol dehydrogenase/reductase [Homo
sapiens]
Length = 319
Score = 38.1 bits (87), Expect = 0.011
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 44/228 (19%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
K + ITG SG G + + H+ AC S + A L + + + V +
Sbjct: 30 KYIFITGCDSGFGNLAARTF--DKKGFHVIAACLTESGSTA-----LKAETSERLRTVLL 82
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTAEG 122
DV++ ++V R ++ +K Q+ K L+ GL + + G
Sbjct: 83 DVTDPENVKRTAQWVKN------------------QVGEKGLW-GLINNAGV------PG 117
Query: 123 LLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFSLE 182
+L D +T + +E E N+FG + + PL+ + ++I SS R +
Sbjct: 118 VLAPTDWLTLEDYREPIEVNLFGLISVTLNMLPLVKKAQG--RVINVSSVGGRLAIVG-- 173
Query: 183 DFQHSKGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNL 230
Y+ SKYA + + +L R+ G++ + PG TNL
Sbjct: 174 --------GGYTPSKYAVEGFNDSLRRDMKAFGVHVSCIEPGLFKTNL 213
>gi|210032110 hydroxysteroid (17-beta) dehydrogenase 13 isoform A
[Homo sapiens]
Length = 300
Score = 38.1 bits (87), Expect = 0.011
Identities = 55/237 (23%), Positives = 91/237 (38%), Gaps = 55/237 (23%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLC-LACRNMSKAEAVCAALLASHPTAEVTIVQ 61
++VLITGA GIG L L + R + + A C L TA +V
Sbjct: 37 EIVLITGAGHGIGRQTTYEFAKRQSILVLWDINKRGVEETAAECRKLGV---TAHAYVV- 92
Query: 62 VDVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTAE 121
D SN + ++R+ ++K+ + + NAG + A+
Sbjct: 93 -DCSNREEIYRSLNQVKKEVGDVTIVVNNAGTV-----------------------YPAD 128
Query: 122 GLLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFSL 181
L T+ ++IT + FE N+ GHF + + L P + N ++ +S + L
Sbjct: 129 LLSTKDEEIT-----KTFEVNILGHFWITKALLPSMMER-NHGHIVTVASVCGHEGIPYL 182
Query: 182 EDFQHSKGKEPYSSSKYATDLLSVALNRNFNQQ-------GLYSNVACPGTALTNLT 231
PY SSK+A +V +R + G+ ++ CP T T
Sbjct: 183 ---------IPYCSSKFA----AVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFT 226
>gi|214010158 NADP-dependent retinol dehydrogenase/reductase [Homo
sapiens]
Length = 319
Score = 38.1 bits (87), Expect = 0.011
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 44/228 (19%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
K + ITG SG G + + H+ AC S + A L + + + V +
Sbjct: 30 KYIFITGCDSGFGNLAARTF--DKKGFHVIAACLTESGSTA-----LKAETSERLRTVLL 82
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTAEG 122
DV++ ++V R ++ +K Q+ K L+ GL + + G
Sbjct: 83 DVTDPENVKRTAQWVKN------------------QVGEKGLW-GLINNAGV------PG 117
Query: 123 LLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFSLE 182
+L D +T + +E E N+FG + + PL+ + ++I SS R +
Sbjct: 118 VLAPTDWLTLEDYREPIEVNLFGLISVTLNMLPLVKKAQG--RVINVSSVGGRLAIVG-- 173
Query: 183 DFQHSKGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNL 230
Y+ SKYA + + +L R+ G++ + PG TNL
Sbjct: 174 --------GGYTPSKYAVEGFNDSLRRDMKAFGVHVSCIEPGLFKTNL 213
>gi|214010156 NADP-dependent retinol dehydrogenase/reductase [Homo
sapiens]
Length = 319
Score = 38.1 bits (87), Expect = 0.011
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 44/228 (19%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
K + ITG SG G + + H+ AC S + A L + + + V +
Sbjct: 30 KYIFITGCDSGFGNLAARTF--DKKGFHVIAACLTESGSTA-----LKAETSERLRTVLL 82
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTAEG 122
DV++ ++V R ++ +K Q+ K L+ GL + + G
Sbjct: 83 DVTDPENVKRTAQWVKN------------------QVGEKGLW-GLINNAGV------PG 117
Query: 123 LLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFSLE 182
+L D +T + +E E N+FG + + PL+ + ++I SS R +
Sbjct: 118 VLAPTDWLTLEDYREPIEVNLFGLISVTLNMLPLVKKAQG--RVINVSSVGGRLAIVG-- 173
Query: 183 DFQHSKGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNL 230
Y+ SKYA + + +L R+ G++ + PG TNL
Sbjct: 174 --------GGYTPSKYAVEGFNDSLRRDMKAFGVHVSCIEPGLFKTNL 213
>gi|22758144 NADP-dependent retinol dehydrogenase/reductase [Homo
sapiens]
Length = 319
Score = 38.1 bits (87), Expect = 0.011
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 44/228 (19%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
K + ITG SG G + + H+ AC S + A L + + + V +
Sbjct: 30 KYIFITGCDSGFGNLAARTF--DKKGFHVIAACLTESGSTA-----LKAETSERLRTVLL 82
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTAEG 122
DV++ ++V R ++ +K Q+ K L+ GL + + G
Sbjct: 83 DVTDPENVKRTAQWVKN------------------QVGEKGLW-GLINNAGV------PG 117
Query: 123 LLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFSLE 182
+L D +T + +E E N+FG + + PL+ + ++I SS R +
Sbjct: 118 VLAPTDWLTLEDYREPIEVNLFGLISVTLNMLPLVKKAQG--RVINVSSVGGRLAIVG-- 173
Query: 183 DFQHSKGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNL 230
Y+ SKYA + + +L R+ G++ + PG TNL
Sbjct: 174 --------GGYTPSKYAVEGFNDSLRRDMKAFGVHVSCIEPGLFKTNL 213
>gi|7706318 dehydrogenase/reductase (SDR family) member 7 [Homo
sapiens]
Length = 339
Score = 37.4 bits (85), Expect = 0.019
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 4 VVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAE--VTIVQ 61
VV +TGASSGIG L +L + L L+ R + + E V L + E + ++
Sbjct: 52 VVWVTGASSGIGEELAYQL--SKLGVSLVLSARRVHELERVKRRCLENGNLKEKDILVLP 109
Query: 62 VDVSNLQSVFRASKELKQRFQRLDCIYLNAGI 93
+D+++ S A+K + Q F R+D + N G+
Sbjct: 110 LDLTDTGSHEAATKAVLQEFGRIDILVNNGGM 141
>gi|19923817 peroxisomal trans-2-enoyl-CoA reductase [Homo sapiens]
Length = 303
Score = 37.4 bits (85), Expect = 0.019
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 33/152 (21%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHP---TAEVTI 59
+V ++TG ++GIG A+ K LL ++ +A R + + ++ L A+ P A V
Sbjct: 19 QVAIVTGGATGIGKAIVKELLELGS--NVVIASRKLERLKSAADELQANLPPTKQARVIP 76
Query: 60 VQVDVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFST 119
+Q ++ N + V K F +++ + N G G F
Sbjct: 77 IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG--------------GQF---------- 112
Query: 120 AEGLLTQGDKITADGLQEVFETNVFGHFILIR 151
L+ + I++ G V ETN+ G F + +
Sbjct: 113 ----LSPAEHISSKGWHAVLETNLTGTFYMCK 140
>gi|4758504 hydroxysteroid (17-beta) dehydrogenase 10 isoform 1
[Homo sapiens]
Length = 261
Score = 36.6 bits (83), Expect = 0.033
Identities = 50/222 (22%), Positives = 87/222 (39%), Gaps = 35/222 (15%)
Query: 4 VVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQVD 63
V +ITG +SG+GLA +RL+ + L + +A+ A D
Sbjct: 12 VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ-------AKKLGNNCVFAPAD 64
Query: 64 VSNLQSVFRASKELKQRFQRLDCIYLNAGI-MPNPQLNIKALFFGLFSRKVIHMFSTAEG 122
V++ + V A K +F R+D AGI + + N+K
Sbjct: 65 VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLK-------------------- 104
Query: 123 LLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFSLE 182
+G T + Q V + N+ G F +IR + + ++ P Q R + S+
Sbjct: 105 ---KGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNE-PDQ---GGQRGVIINTASVA 157
Query: 183 DFQHSKGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPG 224
F+ G+ YS+SK +++ + R+ G+ PG
Sbjct: 158 AFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPG 199
>gi|150247226 retinol dehydrogenase 16 [Homo sapiens]
Length = 317
Score = 36.6 bits (83), Expect = 0.033
Identities = 56/229 (24%), Positives = 92/229 (40%), Gaps = 44/229 (19%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
K V ITG SG G L ++L A L + AC AE L + + V +
Sbjct: 30 KYVFITGCDSGFGKLLARQLDARG--LRVLAACLTEKGAEQ-----LRGQTSDRLETVTL 82
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTAEG 122
DV+ +SV A++ +K +C+ + G+ +GL + I + +
Sbjct: 83 DVTKTESVAAAAQWVK------ECV-RDKGL------------WGLVNNAGISLPTAPNE 123
Query: 123 LLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFSLE 182
LLT+ D +T + + N+ G + L PL+ + +++ SS R S F
Sbjct: 124 LLTKQDFVT------ILDVNLLGVIDVTLSLLPLVRRA--RGRVVNVSSVMGRVSLFG-- 173
Query: 183 DFQHSKGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNLT 231
Y SKY + S +L R + G+ + PG T +T
Sbjct: 174 --------GGYCISKYGVEAFSDSLRRELSYFGVKVAMIEPGYFKTAVT 214
>gi|83715985 hydroxysteroid (17-beta) dehydrogenase 10 isoform 2
[Homo sapiens]
Length = 252
Score = 36.2 bits (82), Expect = 0.043
Identities = 49/215 (22%), Positives = 86/215 (40%), Gaps = 35/215 (16%)
Query: 4 VVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQVD 63
V +ITG +SG+GLA +RL+ + L + +A+ A D
Sbjct: 12 VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ-------AKKLGNNCVFAPAD 64
Query: 64 VSNLQSVFRASKELKQRFQRLDCIYLNAGI-MPNPQLNIKALFFGLFSRKVIHMFSTAEG 122
V++ + V A K +F R+D AGI + + N+K
Sbjct: 65 VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLK-------------------- 104
Query: 123 LLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNFSLE 182
+G T + Q V + N+ G F +IR + + ++ P Q R + S+
Sbjct: 105 ---KGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNE-PDQ---GGQRGVIINTASVA 157
Query: 183 DFQHSKGKEPYSSSKYATDLLSVALNRNFNQQGLY 217
F+ G+ YS+SK +++ + R+ GL+
Sbjct: 158 AFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGLF 192
>gi|4504503 hydroxysteroid (17-beta) dehydrogenase 2 [Homo sapiens]
Length = 387
Score = 35.8 bits (81), Expect = 0.057
Identities = 52/237 (21%), Positives = 86/237 (36%), Gaps = 57/237 (24%)
Query: 2 RKVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQ 61
+K VL+TG G+G ALCK L DEL + +++ A L + ++++Q
Sbjct: 82 QKAVLVTGGDCGLGHALCKYL----DELGFTVFAGVLNE-NGPGAEELRRTCSPRLSVLQ 136
Query: 62 VDVSNLQSVFRASKELKQRFQR--LDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFST 119
+D++ + A ++ Q L + NAG++
Sbjct: 137 MDITKPVQIKDAYSKVAAMLQDRGLWAVINNAGVL------------------------- 171
Query: 120 AEGLLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCHSDNPSQLIWTSSRSARKSNF 179
G T G+ + ++ N FG + + PLL RKS
Sbjct: 172 --GFPTDGELLLMTDYKQCMAVNFFGTVEVTKTFLPLL-----------------RKSKG 212
Query: 180 SLEDFQHSKGKEP------YSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNL 230
L + G P Y SSK A + S + ++ G+ PG LTN+
Sbjct: 213 RLVNVSSMGGGAPMERLASYGSSKAAVTMFSSVMRLELSKWGIKVASIQPGGFLTNI 269
>gi|109715829 short-chain dehydrogenase/reductase [Homo sapiens]
Length = 260
Score = 35.8 bits (81), Expect = 0.057
Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 42/234 (17%)
Query: 3 KVVLITGASSGIGLALCKRLLAEDDELHLCLACRNMSKAEAVCAALLASHPTAEVTIVQV 62
++ L+TGAS GIG A+ + L+ + ++ C R + E + A ++ + +
Sbjct: 12 RLALVTGASGGIGAAVARALVQQGLKVVGC--ARTVGNIEELAAECKSAGYPGTLIPYRC 69
Query: 63 DVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHMFSTAEG 122
D+SN + + ++ + +D NAG+ + +
Sbjct: 70 DLSNEEDILSMFSAIRSQHSGVDICINNAGL------------------------ARPDT 105
Query: 123 LLTQGDKITADGLQEVFETNVFGHFILIRE-LEPLLCHSDNPSQLIWTSSRSA-RKSNFS 180
LL+ + G +++F NV I RE + + + + +I +S S R S
Sbjct: 106 LLSG----STSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLS 161
Query: 181 LEDFQHSKGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVAC--PGTALTNLTY 232
+ F YS++KYA L+ L + + + C PG T +
Sbjct: 162 VTHF--------YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF 207
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,037,583
Number of Sequences: 37866
Number of extensions: 488093
Number of successful extensions: 1304
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 1246
Number of HSP's gapped (non-prelim): 63
length of query: 341
length of database: 18,247,518
effective HSP length: 103
effective length of query: 238
effective length of database: 14,347,320
effective search space: 3414662160
effective search space used: 3414662160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.