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Search of human proteins with 7661798
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7661798 postsynaptic protein CRIPT [Homo sapiens]
(101 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7661798 postsynaptic protein CRIPT [Homo sapiens] 219 3e-58
gi|119395725 cytoplasmic polyadenylation element binding protein... 32 0.14
gi|119395722 cytoplasmic polyadenylation element binding protein... 32 0.14
gi|119395720 cytoplasmic polyadenylation element binding protein... 32 0.14
gi|119395718 cytoplasmic polyadenylation element binding protein... 32 0.14
gi|33386683 hypothetical protein LOC138241 [Homo sapiens] 29 0.70
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 29 0.91
gi|239754889 PREDICTED: similar to hCG2036697 [Homo sapiens] 28 1.2
gi|239749428 PREDICTED: hypothetical protein XP_002347033 [Homo ... 28 1.2
gi|239743562 PREDICTED: hypothetical protein XP_002342894 [Homo ... 28 1.2
gi|226053185 paternally expressed 3 isoform 3 [Homo sapiens] 27 2.7
gi|226053169 paternally expressed 3 isoform 1 [Homo sapiens] 27 2.7
gi|226053148 paternally expressed 3 isoform 2 [Homo sapiens] 27 2.7
gi|226053126 paternally expressed 3 isoform 1 [Homo sapiens] 27 2.7
gi|33354285 paternally expressed 3 isoform 1 [Homo sapiens] 27 2.7
gi|110815809 zinc finger, RAN-binding domain containing 1 protei... 27 2.7
gi|8923885 myoneurin [Homo sapiens] 27 3.5
gi|94400919 WD repeat domain 90 [Homo sapiens] 27 3.5
gi|50348666 peroxisome proliferative activated receptor, alpha [... 26 5.9
gi|7549811 peroxisome proliferative activated receptor, alpha [H... 26 5.9
gi|170650685 zinc finger and BTB domain containing 37 isoform a ... 26 5.9
gi|93277115 ataxin 7-like 2 [Homo sapiens] 26 5.9
gi|37594453 Abl-philin 2 isoform 3 [Homo sapiens] 26 5.9
gi|37594449 Abl-philin 2 isoform 1 [Homo sapiens] 26 5.9
gi|37594451 Abl-philin 2 isoform 2 [Homo sapiens] 26 5.9
gi|37594455 Abl-philin 2 isoform 1 [Homo sapiens] 26 5.9
gi|46094072 zinc finger protein 770 [Homo sapiens] 26 5.9
gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II, pol... 26 7.7
gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II, pol... 26 7.7
gi|239757822 PREDICTED: similar to mitochondrial ribosomal prote... 26 7.7
>gi|7661798 postsynaptic protein CRIPT [Homo sapiens]
Length = 101
Score = 219 bits (559), Expect = 3e-58
Identities = 101/101 (100%), Positives = 101/101 (100%)
Query: 1 MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60
MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI
Sbjct: 1 MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60
Query: 61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101
CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV
Sbjct: 61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101
>gi|119395725 cytoplasmic polyadenylation element binding protein 1
isoform 1 [Homo sapiens]
Length = 561
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 42 SKKARFDPYGKNKFSTCRICKSSVHQPGSHYCQGCAYKKGICAMC 86
+KK + DPY ++ S C IC S QPG +C+ K C C
Sbjct: 496 TKKVQIDPYLED--SLCHICSS---QPGPFFCRDQVCFKYFCRSC 535
>gi|119395722 cytoplasmic polyadenylation element binding protein 1
isoform 3 [Homo sapiens]
Length = 486
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 42 SKKARFDPYGKNKFSTCRICKSSVHQPGSHYCQGCAYKKGICAMC 86
+KK + DPY ++ S C IC S QPG +C+ K C C
Sbjct: 421 TKKVQIDPYLED--SLCHICSS---QPGPFFCRDQVCFKYFCRSC 460
>gi|119395720 cytoplasmic polyadenylation element binding protein 1
isoform 3 [Homo sapiens]
Length = 486
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 42 SKKARFDPYGKNKFSTCRICKSSVHQPGSHYCQGCAYKKGICAMC 86
+KK + DPY ++ S C IC S QPG +C+ K C C
Sbjct: 421 TKKVQIDPYLED--SLCHICSS---QPGPFFCRDQVCFKYFCRSC 460
>gi|119395718 cytoplasmic polyadenylation element binding protein 1
isoform 2 [Homo sapiens]
Length = 491
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 42 SKKARFDPYGKNKFSTCRICKSSVHQPGSHYCQGCAYKKGICAMC 86
+KK + DPY ++ S C IC S QPG +C+ K C C
Sbjct: 426 TKKVQIDPYLED--SLCHICSS---QPGPFFCRDQVCFKYFCRSC 465
>gi|33386683 hypothetical protein LOC138241 [Homo sapiens]
Length = 157
Score = 29.3 bits (64), Expect = 0.70
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 43 KKARFDPYGKNKFSTCRICKSSVHQPGSHY-CQGCAYKKGICAMCGKK 89
K +++ P K K C C + H C+ CA + +CA CGKK
Sbjct: 57 KYSKYKPLSKPK--KCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKK 102
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 28.9 bits (63), Expect = 0.91
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 12 TVITPDTWKDGARNTT---ESGGRKLNE---NKALTSKKARFDPYGKNKFSTCRICKSSV 65
T + PD +GAR T+ E+ G +E K L+ A +P G + + R+ +S
Sbjct: 1679 TCVFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASA 1738
Query: 66 HQPGSHYC 73
HQ +++C
Sbjct: 1739 HQNVTYHC 1746
>gi|239754889 PREDICTED: similar to hCG2036697 [Homo sapiens]
Length = 1029
Score = 28.5 bits (62), Expect = 1.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 29 SGGRKL-NENKALTSKKARFDPYGKNKFSTCRICKSSVHQPGSHYCQGC 76
SG +L N N A KK +F +N+ TC +C SV P S+ C
Sbjct: 878 SGKHQLFNPNTADIFKKGKFHIMARNE--TCNVCTVSVENPCSNTVPAC 924
>gi|239749428 PREDICTED: hypothetical protein XP_002347033 [Homo
sapiens]
Length = 1029
Score = 28.5 bits (62), Expect = 1.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 29 SGGRKL-NENKALTSKKARFDPYGKNKFSTCRICKSSVHQPGSHYCQGC 76
SG +L N N A KK +F +N+ TC +C SV P S+ C
Sbjct: 878 SGKHQLFNPNTADIFKKGKFHIMARNE--TCNVCTVSVENPCSNTVPAC 924
>gi|239743562 PREDICTED: hypothetical protein XP_002342894 [Homo
sapiens]
Length = 1029
Score = 28.5 bits (62), Expect = 1.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 29 SGGRKL-NENKALTSKKARFDPYGKNKFSTCRICKSSVHQPGSHYCQGC 76
SG +L N N A KK +F +N+ TC +C SV P S+ C
Sbjct: 878 SGKHQLFNPNTADIFKKGKFHIMARNE--TCNVCTVSVENPCSNTVPAC 924
>gi|226053185 paternally expressed 3 isoform 3 [Homo sapiens]
Length = 1464
Score = 27.3 bits (59), Expect = 2.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 50 YGKNKFSTCRICKSS 64
YGK+KF CR+CK +
Sbjct: 433 YGKDKFYECRVCKET 447
>gi|226053169 paternally expressed 3 isoform 1 [Homo sapiens]
Length = 1588
Score = 27.3 bits (59), Expect = 2.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 50 YGKNKFSTCRICKSS 64
YGK+KF CR+CK +
Sbjct: 557 YGKDKFYECRVCKET 571
>gi|226053148 paternally expressed 3 isoform 2 [Homo sapiens]
Length = 1462
Score = 27.3 bits (59), Expect = 2.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 50 YGKNKFSTCRICKSS 64
YGK+KF CR+CK +
Sbjct: 431 YGKDKFYECRVCKET 445
>gi|226053126 paternally expressed 3 isoform 1 [Homo sapiens]
Length = 1588
Score = 27.3 bits (59), Expect = 2.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 50 YGKNKFSTCRICKSS 64
YGK+KF CR+CK +
Sbjct: 557 YGKDKFYECRVCKET 571
>gi|33354285 paternally expressed 3 isoform 1 [Homo sapiens]
Length = 1588
Score = 27.3 bits (59), Expect = 2.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 50 YGKNKFSTCRICKSS 64
YGK+KF CR+CK +
Sbjct: 557 YGKDKFYECRVCKET 571
>gi|110815809 zinc finger, RAN-binding domain containing 1 protein
[Homo sapiens]
Length = 708
Score = 27.3 bits (59), Expect = 2.7
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 3 CEKC--EKKLGTVITPDTWKDGAR--------NTTESGGRKL--NENKALTSKKARFDPY 50
C C ++ GT+IT D +K G+ ++TE G L ++ A K+ +
Sbjct: 24 CTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEGGSSPLICPDSSARPRVKSSYSME 83
Query: 51 GKNKFSTCRICKSSVHQPGSHYCQGC 76
NK+S C +C + ++ P + C C
Sbjct: 84 NANKWS-CHMC-TYLNWPRAIRCTQC 107
>gi|8923885 myoneurin [Homo sapiens]
Length = 610
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 58 CRICKSSVHQPGS---HYCQGCAYKKGICAMCGKKVLDTKNYKQ 98
C IC S G H+ + IC +CG D KN K+
Sbjct: 473 CGICGKSFISSGELNKHFRSHTGERPFICELCGNSYTDIKNLKK 516
>gi|94400919 WD repeat domain 90 [Homo sapiens]
Length = 1748
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 3 CEKCEKKLGTVITPDTWKDGARNTTESGGRK---LNENKALTSKKARFDPY 50
C+ +LG P DGAR+T SG + L KA T + P+
Sbjct: 1043 CQASPPRLGVCARPPEGGDGARDTRNSGAPRTTYLASCKAFTPARVSCSPH 1093
>gi|50348666 peroxisome proliferative activated receptor, alpha
[Homo sapiens]
Length = 468
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Query: 58 CRIC--KSSVHQPGSHYCQGC 76
CRIC K+S + G H C+GC
Sbjct: 102 CRICGDKASGYHYGVHACEGC 122
>gi|7549811 peroxisome proliferative activated receptor, alpha [Homo
sapiens]
Length = 468
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Query: 58 CRIC--KSSVHQPGSHYCQGC 76
CRIC K+S + G H C+GC
Sbjct: 102 CRICGDKASGYHYGVHACEGC 122
>gi|170650685 zinc finger and BTB domain containing 37 isoform a
[Homo sapiens]
Length = 503
Score = 26.2 bits (56), Expect = 5.9
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 57 TCRICKSSVHQPGS---HYCQGCAYKKGICAMCGKK 89
TC C S +Q GS H +C MCGKK
Sbjct: 374 TCIYCAKSFNQKGSLDRHMRLHMGITPFVCRMCGKK 409
>gi|93277115 ataxin 7-like 2 [Homo sapiens]
Length = 722
Score = 26.2 bits (56), Expect = 5.9
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 20 KDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCR 59
KDG S RKL+ + +P GK K S CR
Sbjct: 560 KDGVEVEAPSRKRKLSPGPTTLKRTCILEPTGKGKPSGCR 599
>gi|37594453 Abl-philin 2 isoform 3 [Homo sapiens]
Length = 338
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 47 FDPYGKNKFSTCRICKSSVH-QPG-SHYCQGC 76
+ P G+N +T ICK ++ +P +H+C C
Sbjct: 143 YPPQGRNDIATVSICKKCIYPKPARTHHCSIC 174
>gi|37594449 Abl-philin 2 isoform 1 [Homo sapiens]
Length = 377
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 47 FDPYGKNKFSTCRICKSSVH-QPG-SHYCQGC 76
+ P G+N +T ICK ++ +P +H+C C
Sbjct: 143 YPPQGRNDIATVSICKKCIYPKPARTHHCSIC 174
>gi|37594451 Abl-philin 2 isoform 2 [Homo sapiens]
Length = 361
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 47 FDPYGKNKFSTCRICKSSVH-QPG-SHYCQGC 76
+ P G+N +T ICK ++ +P +H+C C
Sbjct: 143 YPPQGRNDIATVSICKKCIYPKPARTHHCSIC 174
>gi|37594455 Abl-philin 2 isoform 1 [Homo sapiens]
Length = 377
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 47 FDPYGKNKFSTCRICKSSVH-QPG-SHYCQGC 76
+ P G+N +T ICK ++ +P +H+C C
Sbjct: 143 YPPQGRNDIATVSICKKCIYPKPARTHHCSIC 174
>gi|46094072 zinc finger protein 770 [Homo sapiens]
Length = 691
Score = 26.2 bits (56), Expect = 5.9
Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 58 CRICKSSVHQPGS---HYCQGCAYKKGICAMCGKKVLDTKNYKQ 98
C +C S P HY K C++CGK ++K+
Sbjct: 627 CSVCAKSFRSPSKLERHYLIHAGQKPFECSVCGKTFRQAPHWKR 670
>gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) phosphatase, subunit 1 isoform FCP1b
[Homo sapiens]
Length = 867
Score = 25.8 bits (55), Expect = 7.7
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 5/30 (16%)
Query: 74 QGCAYK---KGICAMCGKKV--LDTKNYKQ 98
+GC++ KG+CA CG+ + L +KN KQ
Sbjct: 112 EGCSHPVVMKGLCAECGQDLTQLQSKNGKQ 141
>gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) phosphatase, subunit 1 isoform FCP1a
[Homo sapiens]
Length = 961
Score = 25.8 bits (55), Expect = 7.7
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 5/30 (16%)
Query: 74 QGCAYK---KGICAMCGKKV--LDTKNYKQ 98
+GC++ KG+CA CG+ + L +KN KQ
Sbjct: 112 EGCSHPVVMKGLCAECGQDLTQLQSKNGKQ 141
>gi|239757822 PREDICTED: similar to mitochondrial ribosomal protein
S18C [Homo sapiens]
Length = 141
Score = 25.8 bits (55), Expect = 7.7
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 48 DPYGKNKFSTCRICKSSVHQPGSHYCQ-------GCAYKKGICAMCGKKVLD-TKNYKQT 99
+PY K C +C V+ + GC Y + + +CGKK + TK K+
Sbjct: 55 NPY-KESLKKCVLCGKHVNYKNAQLLSQFVSPFTGCIYGRHVTGLCGKKQKEITKAIKRA 113
Query: 100 SV 101
+
Sbjct: 114 QI 115
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,415,441
Number of Sequences: 37866
Number of extensions: 178143
Number of successful extensions: 509
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 496
Number of HSP's gapped (non-prelim): 38
length of query: 101
length of database: 18,247,518
effective HSP length: 72
effective length of query: 29
effective length of database: 15,521,166
effective search space: 450113814
effective search space used: 450113814
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.