BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|7657118 glycine C-acetyltransferase precursor [Homo sapiens] (419 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|7657118 glycine C-acetyltransferase precursor [Homo sapiens] 839 0.0 gi|83977444 5-aminolevulinate synthase 2 isoform c precursor [Ho... 223 2e-58 gi|83977440 5-aminolevulinate synthase 2 isoform b precursor [Ho... 223 2e-58 gi|83977442 5-aminolevulinate synthase 2 isoform a precursor [Ho... 223 2e-58 gi|40316939 5-aminolevulinate synthase 1 [Homo sapiens] 204 1e-52 gi|4502025 5-aminolevulinate synthase 1 [Homo sapiens] 204 1e-52 gi|4758668 serine palmitoyltransferase, long chain base subunit ... 187 2e-47 gi|119220554 serine palmitoyltransferase, long chain base subuni... 178 7e-45 gi|5454084 serine palmitoyltransferase subunit 1 isoform a [Homo... 136 3e-32 gi|30474871 serine palmitoyltransferase subunit 1 isoform b [Hom... 34 0.22 gi|4826673 cadherin 6, type 2 preproprotein [Homo sapiens] 30 4.1 gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Hom... 30 5.3 gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Hom... 30 5.3 gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [H... 30 5.3 gi|119120894 Dmx-like 2 [Homo sapiens] 30 5.3 gi|114431236 zinc finger protein 462 [Homo sapiens] 30 5.3 gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens] 29 7.0 gi|188528618 solute carrier family 6 (neurotransmitter transport... 29 9.1 gi|21314671 transient receptor potential cation channel, subfami... 29 9.1 >gi|7657118 glycine C-acetyltransferase precursor [Homo sapiens] Length = 419 Score = 839 bits (2167), Expect = 0.0 Identities = 419/419 (100%), Positives = 419/419 (100%) Query: 1 MWPGNAWRAALFWVPRGRRAQSALAQLRGILEGELEGIRGAGTWKSERVITSRQGPHIRV 60 MWPGNAWRAALFWVPRGRRAQSALAQLRGILEGELEGIRGAGTWKSERVITSRQGPHIRV Sbjct: 1 MWPGNAWRAALFWVPRGRRAQSALAQLRGILEGELEGIRGAGTWKSERVITSRQGPHIRV 60 Query: 61 DGVSGGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIA 120 DGVSGGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIA Sbjct: 61 DGVSGGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIA 120 Query: 121 RFHQREDAILYPSCYDANAGLFEALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLD 180 RFHQREDAILYPSCYDANAGLFEALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLD Sbjct: 121 RFHQREDAILYPSCYDANAGLFEALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLD 180 Query: 181 MADLEAKLQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLG 240 MADLEAKLQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLG Sbjct: 181 MADLEAKLQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLG 240 Query: 241 PTGRGTDELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPP 300 PTGRGTDELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPP Sbjct: 241 PTGRGTDELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPP 300 Query: 301 AVVGCASKALDLLMGSNTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLAS 360 AVVGCASKALDLLMGSNTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLAS Sbjct: 301 AVVGCASKALDLLMGSNTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLAS 360 Query: 361 RMADDMLKRGIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVEAFVEVGRLHGALP 419 RMADDMLKRGIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVEAFVEVGRLHGALP Sbjct: 361 RMADDMLKRGIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVEAFVEVGRLHGALP 419 >gi|83977444 5-aminolevulinate synthase 2 isoform c precursor [Homo sapiens] Length = 574 Score = 223 bits (569), Expect = 2e-58 Identities = 131/352 (37%), Positives = 202/352 (57%), Gaps = 10/352 (2%) Query: 70 FCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQREDAI 129 +C+N+YLG+S HP+V+QA + L+ GAG R I GT H LE ++A HQ++ A+ Sbjct: 181 WCSNDYLGMSRHPQVLQATQETLQRHGAGAGGTRNISGTSKFHVELEQELAELHQKDSAL 240 Query: 130 LYPSCYDAN-AGLFE-ALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADLEAK 187 L+ SC+ AN + LF A + P + SD NHAS+I GIR A K+ +RH D L+ Sbjct: 241 LFSSCFVANDSTLFTLAKILPGCEIYSDAGNHASMIQGIRNSGAAKFVFRHNDPDHLKKL 300 Query: 188 LQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLGPTGRGTD 247 L+++ ++VA + SMDG I PL+E+C ++ +YGAL F+DE HA G G G G Sbjct: 301 LEKSNPKIPKIVAFETVHSMDGAICPLEELCDVSHQYGALTFVDEVHAVGLYGSRGAGIG 360 Query: 248 ELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPPAVVGCAS 307 E G+M ++ II+ TLGKA G GGY LV ++R A ++F+ SLPP V+ A Sbjct: 361 ERDGIMHKIDIISGTLGKAF-GCVGGYIASTRDLVDMVRSYAAGFIFTTSLPPMVLSGAL 419 Query: 308 KALDLLMG--SNTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLASRMADD 365 +++ LL G + ++ + R + G + I P+ +G+A L S++ D Sbjct: 420 ESVRLLKGEEGQALRRAHQRNVKHMRQLLMDRGLPVIPCPSHIIPIRVGNAALNSKLCDL 479 Query: 366 ML-KRGIFVIGFSYPVVPKGKARIRVQISAVHS----EEDIDRCVEAFVEVG 412 +L K GI+V +YP VP+G+ +R+ S HS E+ +++ + A+ VG Sbjct: 480 LLSKHGIYVQAINYPTVPRGEELLRLAPSPHHSPQMMEDFVEKLLLAWTAVG 531 >gi|83977440 5-aminolevulinate synthase 2 isoform b precursor [Homo sapiens] Length = 550 Score = 223 bits (569), Expect = 2e-58 Identities = 131/352 (37%), Positives = 202/352 (57%), Gaps = 10/352 (2%) Query: 70 FCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQREDAI 129 +C+N+YLG+S HP+V+QA + L+ GAG R I GT H LE ++A HQ++ A+ Sbjct: 157 WCSNDYLGMSRHPQVLQATQETLQRHGAGAGGTRNISGTSKFHVELEQELAELHQKDSAL 216 Query: 130 LYPSCYDAN-AGLFE-ALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADLEAK 187 L+ SC+ AN + LF A + P + SD NHAS+I GIR A K+ +RH D L+ Sbjct: 217 LFSSCFVANDSTLFTLAKILPGCEIYSDAGNHASMIQGIRNSGAAKFVFRHNDPDHLKKL 276 Query: 188 LQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLGPTGRGTD 247 L+++ ++VA + SMDG I PL+E+C ++ +YGAL F+DE HA G G G G Sbjct: 277 LEKSNPKIPKIVAFETVHSMDGAICPLEELCDVSHQYGALTFVDEVHAVGLYGSRGAGIG 336 Query: 248 ELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPPAVVGCAS 307 E G+M ++ II+ TLGKA G GGY LV ++R A ++F+ SLPP V+ A Sbjct: 337 ERDGIMHKIDIISGTLGKAF-GCVGGYIASTRDLVDMVRSYAAGFIFTTSLPPMVLSGAL 395 Query: 308 KALDLLMG--SNTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLASRMADD 365 +++ LL G + ++ + R + G + I P+ +G+A L S++ D Sbjct: 396 ESVRLLKGEEGQALRRAHQRNVKHMRQLLMDRGLPVIPCPSHIIPIRVGNAALNSKLCDL 455 Query: 366 ML-KRGIFVIGFSYPVVPKGKARIRVQISAVHS----EEDIDRCVEAFVEVG 412 +L K GI+V +YP VP+G+ +R+ S HS E+ +++ + A+ VG Sbjct: 456 LLSKHGIYVQAINYPTVPRGEELLRLAPSPHHSPQMMEDFVEKLLLAWTAVG 507 >gi|83977442 5-aminolevulinate synthase 2 isoform a precursor [Homo sapiens] Length = 587 Score = 223 bits (569), Expect = 2e-58 Identities = 131/352 (37%), Positives = 202/352 (57%), Gaps = 10/352 (2%) Query: 70 FCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQREDAI 129 +C+N+YLG+S HP+V+QA + L+ GAG R I GT H LE ++A HQ++ A+ Sbjct: 194 WCSNDYLGMSRHPQVLQATQETLQRHGAGAGGTRNISGTSKFHVELEQELAELHQKDSAL 253 Query: 130 LYPSCYDAN-AGLFE-ALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADLEAK 187 L+ SC+ AN + LF A + P + SD NHAS+I GIR A K+ +RH D L+ Sbjct: 254 LFSSCFVANDSTLFTLAKILPGCEIYSDAGNHASMIQGIRNSGAAKFVFRHNDPDHLKKL 313 Query: 188 LQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLGPTGRGTD 247 L+++ ++VA + SMDG I PL+E+C ++ +YGAL F+DE HA G G G G Sbjct: 314 LEKSNPKIPKIVAFETVHSMDGAICPLEELCDVSHQYGALTFVDEVHAVGLYGSRGAGIG 373 Query: 248 ELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPPAVVGCAS 307 E G+M ++ II+ TLGKA G GGY LV ++R A ++F+ SLPP V+ A Sbjct: 374 ERDGIMHKIDIISGTLGKAF-GCVGGYIASTRDLVDMVRSYAAGFIFTTSLPPMVLSGAL 432 Query: 308 KALDLLMG--SNTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLASRMADD 365 +++ LL G + ++ + R + G + I P+ +G+A L S++ D Sbjct: 433 ESVRLLKGEEGQALRRAHQRNVKHMRQLLMDRGLPVIPCPSHIIPIRVGNAALNSKLCDL 492 Query: 366 ML-KRGIFVIGFSYPVVPKGKARIRVQISAVHS----EEDIDRCVEAFVEVG 412 +L K GI+V +YP VP+G+ +R+ S HS E+ +++ + A+ VG Sbjct: 493 LLSKHGIYVQAINYPTVPRGEELLRLAPSPHHSPQMMEDFVEKLLLAWTAVG 544 >gi|40316939 5-aminolevulinate synthase 1 [Homo sapiens] Length = 640 Score = 204 bits (519), Expect = 1e-52 Identities = 117/342 (34%), Positives = 190/342 (55%), Gaps = 6/342 (1%) Query: 70 FCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQREDAI 129 +C+N+YLG+S HP V A + L++ GAG R I GT H +LE ++A H ++ A+ Sbjct: 248 WCSNDYLGMSRHPRVCGAVMDTLKQHGAGAGGTRNISGTSKFHVDLERELADLHGKDAAL 307 Query: 130 LYPSCYDAN-AGLFE-ALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADLEAK 187 L+ SC+ AN + LF A + P + SD NHAS+I GIR + KY +RH D++ L Sbjct: 308 LFSSCFVANDSTLFTLAKMMPGCEIYSDSGNHASMIQGIRNSRVPKYIFRHNDVSHLREL 367 Query: 188 LQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLGPTGRGTD 247 LQ + ++VA + SMDG + PL+E+C +A +GA+ F+DE HA G G G G Sbjct: 368 LQRSDPSVPKIVAFETVHSMDGAVCPLEELCDVAHEFGAITFVDEVHAVGLYGARGGGIG 427 Query: 248 ELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPPAVVGCAS 307 + GVM ++ II+ TLGKA G GGY L+ +R A ++F+ SLPP ++ A Sbjct: 428 DRDGVMPKMDIISGTLGKAF-GCVGGYIASTSSLIDTVRSYAAGFIFTTSLPPMLLAGAL 486 Query: 308 KALDLLMGS--NTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLASRMADD 365 +++ +L + + + + R + AG + I PV + DA + + D+ Sbjct: 487 ESVRILKSAEGRVLRRQHQRNVKLMRQMLMDAGLPVVHCPSHIIPVRVADAAKNTEVCDE 546 Query: 366 MLKR-GIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVE 406 ++ R I+V +YP VP+G+ +R+ + H+ + ++ +E Sbjct: 547 LMSRHNIYVQAINYPTVPRGEELLRIAPTPHHTPQMMNYFLE 588 >gi|4502025 5-aminolevulinate synthase 1 [Homo sapiens] Length = 640 Score = 204 bits (519), Expect = 1e-52 Identities = 117/342 (34%), Positives = 190/342 (55%), Gaps = 6/342 (1%) Query: 70 FCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQREDAI 129 +C+N+YLG+S HP V A + L++ GAG R I GT H +LE ++A H ++ A+ Sbjct: 248 WCSNDYLGMSRHPRVCGAVMDTLKQHGAGAGGTRNISGTSKFHVDLERELADLHGKDAAL 307 Query: 130 LYPSCYDAN-AGLFE-ALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADLEAK 187 L+ SC+ AN + LF A + P + SD NHAS+I GIR + KY +RH D++ L Sbjct: 308 LFSSCFVANDSTLFTLAKMMPGCEIYSDSGNHASMIQGIRNSRVPKYIFRHNDVSHLREL 367 Query: 188 LQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLGPTGRGTD 247 LQ + ++VA + SMDG + PL+E+C +A +GA+ F+DE HA G G G G Sbjct: 368 LQRSDPSVPKIVAFETVHSMDGAVCPLEELCDVAHEFGAITFVDEVHAVGLYGARGGGIG 427 Query: 248 ELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPPAVVGCAS 307 + GVM ++ II+ TLGKA G GGY L+ +R A ++F+ SLPP ++ A Sbjct: 428 DRDGVMPKMDIISGTLGKAF-GCVGGYIASTSSLIDTVRSYAAGFIFTTSLPPMLLAGAL 486 Query: 308 KALDLLMGS--NTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLASRMADD 365 +++ +L + + + + R + AG + I PV + DA + + D+ Sbjct: 487 ESVRILKSAEGRVLRRQHQRNVKLMRQMLMDAGLPVVHCPSHIIPVRVADAAKNTEVCDE 546 Query: 366 MLKR-GIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVE 406 ++ R I+V +YP VP+G+ +R+ + H+ + ++ +E Sbjct: 547 LMSRHNIYVQAINYPTVPRGEELLRIAPTPHHTPQMMNYFLE 588 >gi|4758668 serine palmitoyltransferase, long chain base subunit 2 [Homo sapiens] Length = 562 Score = 187 bits (474), Expect = 2e-47 Identities = 125/367 (34%), Positives = 191/367 (52%), Gaps = 19/367 (5%) Query: 66 GILNFCANNYLGLSSHPEVIQ-AGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQ 124 G++N + NYLG + + Q A + LEE+GAG+ S R G H+ LE +ARF Sbjct: 169 GVINMGSYNYLGFARNTGSCQEAAAKVLEEYGAGVCSTRQEIGNLDKHEELEELVARFLG 228 Query: 125 REDAILYPSCYDANAGLFEALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADL 184 E A+ Y + N+ AL+ +LSDELNHAS++ G RL A ++H +M L Sbjct: 229 VEAAMAYGMGFATNSMNIPALVGKGCLILSDELNHASLVLGARLSGATIRIFKHNNMQSL 288 Query: 185 EAKLQEA---------QKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHA 235 E L++A + + L+ +G +SM+G I L E+ L +Y A +++DE H+ Sbjct: 289 EKLLKDAIVYGQPRTRRPWKKILILVEGIYSMEGSIVRLPEVIALKKKYKAYLYLDEAHS 348 Query: 236 TGFLGPTGRGTDELLGV-MDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLF 294 G LGPTGRG E G+ + V ++ T K+ GASGGY G L+ LR + ++ Sbjct: 349 IGALGPTGRGVVEYFGLDPEDVDVMMGTFTKSF-GASGGYIGGKKELIDYLRTHSHSAVY 407 Query: 295 SNSLPPAVVGCASKALDLLMGSN------TIVQSMAAKTQRFRSKMEAAGFTISG-ASHP 347 + SL P VV ++ +MG + VQ +A T+ FR +++ GF I G P Sbjct: 408 ATSLSPPVVEQIITSMKCIMGQDGTSLGKECVQQLAENTRYFRRRLKEMGFIIYGNEDSP 467 Query: 348 ICPVMLGDARLASRMADDMLKRGIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVEA 407 + P+ML +MLKR I V+ +P P ++R R +SA H++E +D ++ Sbjct: 468 VVPLMLYMPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKE 527 Query: 408 FVEVGRL 414 EVG L Sbjct: 528 IDEVGDL 534 >gi|119220554 serine palmitoyltransferase, long chain base subunit 3 [Homo sapiens] Length = 552 Score = 178 bits (452), Expect = 7e-45 Identities = 117/366 (31%), Positives = 194/366 (53%), Gaps = 19/366 (5%) Query: 67 ILNFCANNYLGLSS-HPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQR 125 ++N + N+LGL++ + E ++ LE +G G++S R GT HK LE +A+F Sbjct: 162 VINMGSYNFLGLAAKYDESMRTIKDVLEVYGTGVASTRHEMGTLDKHKELEDLVAKFLNV 221 Query: 126 EDAILYPSCYDANAGLFEALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADLE 185 E A+++ + N+ AL+ +LSDELNH S++ G RL A ++H + LE Sbjct: 222 EAAMVFGMGFATNSMNIPALVGKGCLILSDELNHTSLVLGARLSGATIRIFKHNNTQSLE 281 Query: 186 AKLQEA---------QKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHAT 236 L++A + + L+ +G +SM+G I L +I L +Y A +++DE H+ Sbjct: 282 KLLRDAVIYGQPRTRRAWKKILILVEGVYSMEGSIVHLPQIIALKKKYKAYLYIDEAHSI 341 Query: 237 GFLGPTGRGTDELLGV-MDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFS 295 G +GPTGRG E G+ +V ++ T K+ GASGGY G LV LR + +++ Sbjct: 342 GAVGPTGRGVTEFFGLDPHEVDVLMGTFTKSF-GASGGYIAGRKDLVDYLRVHSHSAVYA 400 Query: 296 NSLPPAVVGCASKALDLLMGSNTI------VQSMAAKTQRFRSKMEAAGFTISGASH-PI 348 +S+ P + ++L L+MG + VQ +A T+ FR +++ GF I G + + Sbjct: 401 SSMSPPIAEQIIRSLKLIMGLDGTTQGLQRVQQLAKNTRYFRQRLQEMGFIIYGNENASV 460 Query: 349 CPVMLGDARLASRMADDMLKRGIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVEAF 408 P++L + A ML++ I V+ +P P +AR R +SA H+ E +D +EA Sbjct: 461 VPLLLYMPGKVAAFARHMLEKKIGVVVVGFPATPLAEARARFCVSAAHTREMLDTVLEAL 520 Query: 409 VEVGRL 414 E+G L Sbjct: 521 DEMGDL 526 >gi|5454084 serine palmitoyltransferase subunit 1 isoform a [Homo sapiens] Length = 473 Score = 136 bits (343), Expect = 3e-32 Identities = 104/370 (28%), Positives = 175/370 (47%), Gaps = 25/370 (6%) Query: 68 LNFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQRED 127 +NF + N+LGL +P V A L +L+++G G R GT +H +LE ++A+F + E+ Sbjct: 101 INFASFNFLGLLDNPRVKAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEE 160 Query: 128 AILYPSCYDANAGLFEALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADLEAK 187 AI+Y + A A D V D +I G++ ++ ++H DMADLE Sbjct: 161 AIIYSYGFATIASAIPAYSKRGDIVFVDRAACFAIQKGLQASRSDIKLFKHNDMADLERL 220 Query: 188 LQEAQ--------KHRL--RLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATG 237 L+E + K R+ R + +G + G I PL E+ L +Y A +F++E + G Sbjct: 221 LKEQEIEDQKNPRKARVTRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFG 280 Query: 238 FLGPTGRGTDELLGV-MDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSN 296 LG GRG E G+ +D + +I++ + AL + GG+ G ++ R + Y FS Sbjct: 281 VLGEHGRGVTEHYGINIDDIDLISANMENAL-ASIGGFCCGRSFVIDHQRLSGQGYCFSA 339 Query: 297 SLPPAVVGCASKALDLLMGSNTIVQSMAAKTQRFR------SKMEAAGFTISGASHPICP 350 SLPP + A +AL+++ + I + K + S ++ G ++S A H Sbjct: 340 SLPPLLAAAAIEALNIMEENPGIFAVLKEKCGQIHKALQGISGLKVVGESLSPAFHLQLE 399 Query: 351 VMLG----DARLASRMADDMLKRGIFVIGFSYPVVPK---GKARIRVQISAVHSEEDIDR 403 G D RL + D + R I + Y + IRV ++ +EE+++R Sbjct: 400 ESTGSREQDVRLLQEIVDQCMNRSIALTQARYLEKEEKCLPPPSIRVVVTVEQTEEELER 459 Query: 404 CVEAFVEVGR 413 EV + Sbjct: 460 AASTIKEVAQ 469 >gi|30474871 serine palmitoyltransferase subunit 1 isoform b [Homo sapiens] Length = 143 Score = 34.3 bits (77), Expect = 0.22 Identities = 16/41 (39%), Positives = 24/41 (58%) Query: 68 LNFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGT 108 +NF + N+LGL +P V A L +L+++G G R GT Sbjct: 101 INFASFNFLGLLDNPRVKAAALASLKKYGVGTCGPRGFYGT 141 >gi|4826673 cadherin 6, type 2 preproprotein [Homo sapiens] Length = 790 Score = 30.0 bits (66), Expect = 4.1 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 3/74 (4%) Query: 190 EAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLGPTGRGTDEL 249 E + L +V +D + + + C +G M CHA + PTG T L Sbjct: 560 EMSTYLLPVVISDNDYPVQSSTGTVTVRVCACDHHGN---MQSCHAEALIHPTGLSTGAL 616 Query: 250 LGVMDQVTIINSTL 263 + ++ + I+ T+ Sbjct: 617 VAILLCIVILLVTV 630 >gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Homo sapiens] Length = 622 Score = 29.6 bits (65), Expect = 5.3 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 9/81 (11%) Query: 41 AGTWKSERVITSRQGPHIRVDGVSGGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLS 100 AG WK+ R+ GV L + L + P V+QA L LE+ G + Sbjct: 257 AGKWKAAET---------RLFGVPLDSLLEADHKVLPSTQVPLVLQALLSCLEKRGLDME 307 Query: 101 SVRFICGTQSIHKNLEAKIAR 121 + + G+Q+ K LE K+ R Sbjct: 308 GILRVPGSQARVKGLEQKLER 328 >gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Homo sapiens] Length = 622 Score = 29.6 bits (65), Expect = 5.3 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 9/81 (11%) Query: 41 AGTWKSERVITSRQGPHIRVDGVSGGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLS 100 AG WK+ R+ GV L + L + P V+QA L LE+ G + Sbjct: 257 AGKWKAAET---------RLFGVPLDSLLEADHKVLPSTQVPLVLQALLSCLEKRGLDME 307 Query: 101 SVRFICGTQSIHKNLEAKIAR 121 + + G+Q+ K LE K+ R Sbjct: 308 GILRVPGSQARVKGLEQKLER 328 >gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [Homo sapiens] Length = 622 Score = 29.6 bits (65), Expect = 5.3 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 9/81 (11%) Query: 41 AGTWKSERVITSRQGPHIRVDGVSGGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLS 100 AG WK+ R+ GV L + L + P V+QA L LE+ G + Sbjct: 257 AGKWKAAET---------RLFGVPLDSLLEADHKVLPSTQVPLVLQALLSCLEKRGLDME 307 Query: 101 SVRFICGTQSIHKNLEAKIAR 121 + + G+Q+ K LE K+ R Sbjct: 308 GILRVPGSQARVKGLEQKLER 328 >gi|119120894 Dmx-like 2 [Homo sapiens] Length = 3036 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 129 ILYPSCYDANAGLFEALLTPEDAVLSD---ELNHASIIDGIRLCKAHKYRYRH 178 +L SC+D L+ L PED +L + E +SI + HK R +H Sbjct: 255 VLLTSCHDGVCRLWAETLLPEDCLLGEQICETTTSSIASSLSHAGRHKDRIQH 307 >gi|114431236 zinc finger protein 462 [Homo sapiens] Length = 2506 Score = 29.6 bits (65), Expect = 5.3 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 76 LGLSSHPE-VIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQREDAIL 130 LGLSS V +A + +F LS V+ I NL++KI + Q+EDA++ Sbjct: 663 LGLSSKNNFVAKASRKLANDFPLDLSPVKKRTRIDEIASNLQSKINQTKQQEDAVI 718 >gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens] Length = 951 Score = 29.3 bits (64), Expect = 7.0 Identities = 13/42 (30%), Positives = 22/42 (52%) Query: 168 LCKAHKYRYRHLDMADLEAKLQEAQKHRLRLVATDGAFSMDG 209 LC +Y H D+ + EA+ +E K +A DG+++ G Sbjct: 109 LCDEERYLALHTDLLEEEARQEEEYKRLSEALAEDGSYNAVG 150 >gi|188528618 solute carrier family 6 (neurotransmitter transporter, GABA), member 1 [Homo sapiens] Length = 599 Score = 28.9 bits (63), Expect = 9.1 Identities = 16/58 (27%), Positives = 25/58 (43%) Query: 58 IRVDGVSGGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNL 115 + + G GIL + N+ LS + A Q +G GL S+ + S H N+ Sbjct: 259 VTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGLGSLIALGSYNSFHNNV 316 >gi|21314671 transient receptor potential cation channel, subfamily M, member 4 [Homo sapiens] Length = 1214 Score = 28.9 bits (63), Expect = 9.1 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 241 PTGRGTDELLGVMDQVTIINSTLGKALGGASGGYTTG-PGPLVSLLRQRARPYL 293 P G+ ELL T++ L + L G G +G PGP + L QR R YL Sbjct: 807 PAPPGSLELLLYFWAFTLLCEELRQGLSGGGGSLASGGPGPGHASLSQRLRLYL 860 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.137 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,348,721 Number of Sequences: 37866 Number of extensions: 668536 Number of successful extensions: 1502 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 1462 Number of HSP's gapped (non-prelim): 19 length of query: 419 length of database: 18,247,518 effective HSP length: 105 effective length of query: 314 effective length of database: 14,271,588 effective search space: 4481278632 effective search space used: 4481278632 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.