Guide to the Human Genome
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Search of human proteins with 7657118

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7657118 glycine C-acetyltransferase precursor [Homo sapiens]
         (419 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7657118 glycine C-acetyltransferase precursor [Homo sapiens]       839   0.0  
gi|83977444 5-aminolevulinate synthase 2 isoform c precursor [Ho...   223   2e-58
gi|83977440 5-aminolevulinate synthase 2 isoform b precursor [Ho...   223   2e-58
gi|83977442 5-aminolevulinate synthase 2 isoform a precursor [Ho...   223   2e-58
gi|40316939 5-aminolevulinate synthase 1 [Homo sapiens]               204   1e-52
gi|4502025 5-aminolevulinate synthase 1 [Homo sapiens]                204   1e-52
gi|4758668 serine palmitoyltransferase, long chain base subunit ...   187   2e-47
gi|119220554 serine palmitoyltransferase, long chain base subuni...   178   7e-45
gi|5454084 serine palmitoyltransferase subunit 1 isoform a [Homo...   136   3e-32
gi|30474871 serine palmitoyltransferase subunit 1 isoform b [Hom...    34   0.22 
gi|4826673 cadherin 6, type 2 preproprotein [Homo sapiens]             30   4.1  
gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Hom...    30   5.3  
gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Hom...    30   5.3  
gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [H...    30   5.3  
gi|119120894 Dmx-like 2 [Homo sapiens]                                 30   5.3  
gi|114431236 zinc finger protein 462 [Homo sapiens]                    30   5.3  
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]     29   7.0  
gi|188528618 solute carrier family 6 (neurotransmitter transport...    29   9.1  
gi|21314671 transient receptor potential cation channel, subfami...    29   9.1  

>gi|7657118 glycine C-acetyltransferase precursor [Homo sapiens]
          Length = 419

 Score =  839 bits (2167), Expect = 0.0
 Identities = 419/419 (100%), Positives = 419/419 (100%)

Query: 1   MWPGNAWRAALFWVPRGRRAQSALAQLRGILEGELEGIRGAGTWKSERVITSRQGPHIRV 60
           MWPGNAWRAALFWVPRGRRAQSALAQLRGILEGELEGIRGAGTWKSERVITSRQGPHIRV
Sbjct: 1   MWPGNAWRAALFWVPRGRRAQSALAQLRGILEGELEGIRGAGTWKSERVITSRQGPHIRV 60

Query: 61  DGVSGGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIA 120
           DGVSGGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIA
Sbjct: 61  DGVSGGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIA 120

Query: 121 RFHQREDAILYPSCYDANAGLFEALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLD 180
           RFHQREDAILYPSCYDANAGLFEALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLD
Sbjct: 121 RFHQREDAILYPSCYDANAGLFEALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLD 180

Query: 181 MADLEAKLQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLG 240
           MADLEAKLQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLG
Sbjct: 181 MADLEAKLQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLG 240

Query: 241 PTGRGTDELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPP 300
           PTGRGTDELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPP
Sbjct: 241 PTGRGTDELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPP 300

Query: 301 AVVGCASKALDLLMGSNTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLAS 360
           AVVGCASKALDLLMGSNTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLAS
Sbjct: 301 AVVGCASKALDLLMGSNTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLAS 360

Query: 361 RMADDMLKRGIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVEAFVEVGRLHGALP 419
           RMADDMLKRGIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVEAFVEVGRLHGALP
Sbjct: 361 RMADDMLKRGIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVEAFVEVGRLHGALP 419


>gi|83977444 5-aminolevulinate synthase 2 isoform c precursor [Homo
           sapiens]
          Length = 574

 Score =  223 bits (569), Expect = 2e-58
 Identities = 131/352 (37%), Positives = 202/352 (57%), Gaps = 10/352 (2%)

Query: 70  FCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQREDAI 129
           +C+N+YLG+S HP+V+QA  + L+  GAG    R I GT   H  LE ++A  HQ++ A+
Sbjct: 181 WCSNDYLGMSRHPQVLQATQETLQRHGAGAGGTRNISGTSKFHVELEQELAELHQKDSAL 240

Query: 130 LYPSCYDAN-AGLFE-ALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADLEAK 187
           L+ SC+ AN + LF  A + P   + SD  NHAS+I GIR   A K+ +RH D   L+  
Sbjct: 241 LFSSCFVANDSTLFTLAKILPGCEIYSDAGNHASMIQGIRNSGAAKFVFRHNDPDHLKKL 300

Query: 188 LQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLGPTGRGTD 247
           L+++     ++VA +   SMDG I PL+E+C ++ +YGAL F+DE HA G  G  G G  
Sbjct: 301 LEKSNPKIPKIVAFETVHSMDGAICPLEELCDVSHQYGALTFVDEVHAVGLYGSRGAGIG 360

Query: 248 ELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPPAVVGCAS 307
           E  G+M ++ II+ TLGKA  G  GGY      LV ++R  A  ++F+ SLPP V+  A 
Sbjct: 361 ERDGIMHKIDIISGTLGKAF-GCVGGYIASTRDLVDMVRSYAAGFIFTTSLPPMVLSGAL 419

Query: 308 KALDLLMG--SNTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLASRMADD 365
           +++ LL G     + ++     +  R  +   G  +      I P+ +G+A L S++ D 
Sbjct: 420 ESVRLLKGEEGQALRRAHQRNVKHMRQLLMDRGLPVIPCPSHIIPIRVGNAALNSKLCDL 479

Query: 366 ML-KRGIFVIGFSYPVVPKGKARIRVQISAVHS----EEDIDRCVEAFVEVG 412
           +L K GI+V   +YP VP+G+  +R+  S  HS    E+ +++ + A+  VG
Sbjct: 480 LLSKHGIYVQAINYPTVPRGEELLRLAPSPHHSPQMMEDFVEKLLLAWTAVG 531


>gi|83977440 5-aminolevulinate synthase 2 isoform b precursor [Homo
           sapiens]
          Length = 550

 Score =  223 bits (569), Expect = 2e-58
 Identities = 131/352 (37%), Positives = 202/352 (57%), Gaps = 10/352 (2%)

Query: 70  FCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQREDAI 129
           +C+N+YLG+S HP+V+QA  + L+  GAG    R I GT   H  LE ++A  HQ++ A+
Sbjct: 157 WCSNDYLGMSRHPQVLQATQETLQRHGAGAGGTRNISGTSKFHVELEQELAELHQKDSAL 216

Query: 130 LYPSCYDAN-AGLFE-ALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADLEAK 187
           L+ SC+ AN + LF  A + P   + SD  NHAS+I GIR   A K+ +RH D   L+  
Sbjct: 217 LFSSCFVANDSTLFTLAKILPGCEIYSDAGNHASMIQGIRNSGAAKFVFRHNDPDHLKKL 276

Query: 188 LQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLGPTGRGTD 247
           L+++     ++VA +   SMDG I PL+E+C ++ +YGAL F+DE HA G  G  G G  
Sbjct: 277 LEKSNPKIPKIVAFETVHSMDGAICPLEELCDVSHQYGALTFVDEVHAVGLYGSRGAGIG 336

Query: 248 ELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPPAVVGCAS 307
           E  G+M ++ II+ TLGKA  G  GGY      LV ++R  A  ++F+ SLPP V+  A 
Sbjct: 337 ERDGIMHKIDIISGTLGKAF-GCVGGYIASTRDLVDMVRSYAAGFIFTTSLPPMVLSGAL 395

Query: 308 KALDLLMG--SNTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLASRMADD 365
           +++ LL G     + ++     +  R  +   G  +      I P+ +G+A L S++ D 
Sbjct: 396 ESVRLLKGEEGQALRRAHQRNVKHMRQLLMDRGLPVIPCPSHIIPIRVGNAALNSKLCDL 455

Query: 366 ML-KRGIFVIGFSYPVVPKGKARIRVQISAVHS----EEDIDRCVEAFVEVG 412
           +L K GI+V   +YP VP+G+  +R+  S  HS    E+ +++ + A+  VG
Sbjct: 456 LLSKHGIYVQAINYPTVPRGEELLRLAPSPHHSPQMMEDFVEKLLLAWTAVG 507


>gi|83977442 5-aminolevulinate synthase 2 isoform a precursor [Homo
           sapiens]
          Length = 587

 Score =  223 bits (569), Expect = 2e-58
 Identities = 131/352 (37%), Positives = 202/352 (57%), Gaps = 10/352 (2%)

Query: 70  FCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQREDAI 129
           +C+N+YLG+S HP+V+QA  + L+  GAG    R I GT   H  LE ++A  HQ++ A+
Sbjct: 194 WCSNDYLGMSRHPQVLQATQETLQRHGAGAGGTRNISGTSKFHVELEQELAELHQKDSAL 253

Query: 130 LYPSCYDAN-AGLFE-ALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADLEAK 187
           L+ SC+ AN + LF  A + P   + SD  NHAS+I GIR   A K+ +RH D   L+  
Sbjct: 254 LFSSCFVANDSTLFTLAKILPGCEIYSDAGNHASMIQGIRNSGAAKFVFRHNDPDHLKKL 313

Query: 188 LQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLGPTGRGTD 247
           L+++     ++VA +   SMDG I PL+E+C ++ +YGAL F+DE HA G  G  G G  
Sbjct: 314 LEKSNPKIPKIVAFETVHSMDGAICPLEELCDVSHQYGALTFVDEVHAVGLYGSRGAGIG 373

Query: 248 ELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPPAVVGCAS 307
           E  G+M ++ II+ TLGKA  G  GGY      LV ++R  A  ++F+ SLPP V+  A 
Sbjct: 374 ERDGIMHKIDIISGTLGKAF-GCVGGYIASTRDLVDMVRSYAAGFIFTTSLPPMVLSGAL 432

Query: 308 KALDLLMG--SNTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLASRMADD 365
           +++ LL G     + ++     +  R  +   G  +      I P+ +G+A L S++ D 
Sbjct: 433 ESVRLLKGEEGQALRRAHQRNVKHMRQLLMDRGLPVIPCPSHIIPIRVGNAALNSKLCDL 492

Query: 366 ML-KRGIFVIGFSYPVVPKGKARIRVQISAVHS----EEDIDRCVEAFVEVG 412
           +L K GI+V   +YP VP+G+  +R+  S  HS    E+ +++ + A+  VG
Sbjct: 493 LLSKHGIYVQAINYPTVPRGEELLRLAPSPHHSPQMMEDFVEKLLLAWTAVG 544


>gi|40316939 5-aminolevulinate synthase 1 [Homo sapiens]
          Length = 640

 Score =  204 bits (519), Expect = 1e-52
 Identities = 117/342 (34%), Positives = 190/342 (55%), Gaps = 6/342 (1%)

Query: 70  FCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQREDAI 129
           +C+N+YLG+S HP V  A +  L++ GAG    R I GT   H +LE ++A  H ++ A+
Sbjct: 248 WCSNDYLGMSRHPRVCGAVMDTLKQHGAGAGGTRNISGTSKFHVDLERELADLHGKDAAL 307

Query: 130 LYPSCYDAN-AGLFE-ALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADLEAK 187
           L+ SC+ AN + LF  A + P   + SD  NHAS+I GIR  +  KY +RH D++ L   
Sbjct: 308 LFSSCFVANDSTLFTLAKMMPGCEIYSDSGNHASMIQGIRNSRVPKYIFRHNDVSHLREL 367

Query: 188 LQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLGPTGRGTD 247
           LQ +     ++VA +   SMDG + PL+E+C +A  +GA+ F+DE HA G  G  G G  
Sbjct: 368 LQRSDPSVPKIVAFETVHSMDGAVCPLEELCDVAHEFGAITFVDEVHAVGLYGARGGGIG 427

Query: 248 ELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPPAVVGCAS 307
           +  GVM ++ II+ TLGKA  G  GGY      L+  +R  A  ++F+ SLPP ++  A 
Sbjct: 428 DRDGVMPKMDIISGTLGKAF-GCVGGYIASTSSLIDTVRSYAAGFIFTTSLPPMLLAGAL 486

Query: 308 KALDLLMGS--NTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLASRMADD 365
           +++ +L  +    + +      +  R  +  AG  +      I PV + DA   + + D+
Sbjct: 487 ESVRILKSAEGRVLRRQHQRNVKLMRQMLMDAGLPVVHCPSHIIPVRVADAAKNTEVCDE 546

Query: 366 MLKR-GIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVE 406
           ++ R  I+V   +YP VP+G+  +R+  +  H+ + ++  +E
Sbjct: 547 LMSRHNIYVQAINYPTVPRGEELLRIAPTPHHTPQMMNYFLE 588


>gi|4502025 5-aminolevulinate synthase 1 [Homo sapiens]
          Length = 640

 Score =  204 bits (519), Expect = 1e-52
 Identities = 117/342 (34%), Positives = 190/342 (55%), Gaps = 6/342 (1%)

Query: 70  FCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQREDAI 129
           +C+N+YLG+S HP V  A +  L++ GAG    R I GT   H +LE ++A  H ++ A+
Sbjct: 248 WCSNDYLGMSRHPRVCGAVMDTLKQHGAGAGGTRNISGTSKFHVDLERELADLHGKDAAL 307

Query: 130 LYPSCYDAN-AGLFE-ALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADLEAK 187
           L+ SC+ AN + LF  A + P   + SD  NHAS+I GIR  +  KY +RH D++ L   
Sbjct: 308 LFSSCFVANDSTLFTLAKMMPGCEIYSDSGNHASMIQGIRNSRVPKYIFRHNDVSHLREL 367

Query: 188 LQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLGPTGRGTD 247
           LQ +     ++VA +   SMDG + PL+E+C +A  +GA+ F+DE HA G  G  G G  
Sbjct: 368 LQRSDPSVPKIVAFETVHSMDGAVCPLEELCDVAHEFGAITFVDEVHAVGLYGARGGGIG 427

Query: 248 ELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPPAVVGCAS 307
           +  GVM ++ II+ TLGKA  G  GGY      L+  +R  A  ++F+ SLPP ++  A 
Sbjct: 428 DRDGVMPKMDIISGTLGKAF-GCVGGYIASTSSLIDTVRSYAAGFIFTTSLPPMLLAGAL 486

Query: 308 KALDLLMGS--NTIVQSMAAKTQRFRSKMEAAGFTISGASHPICPVMLGDARLASRMADD 365
           +++ +L  +    + +      +  R  +  AG  +      I PV + DA   + + D+
Sbjct: 487 ESVRILKSAEGRVLRRQHQRNVKLMRQMLMDAGLPVVHCPSHIIPVRVADAAKNTEVCDE 546

Query: 366 MLKR-GIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVE 406
           ++ R  I+V   +YP VP+G+  +R+  +  H+ + ++  +E
Sbjct: 547 LMSRHNIYVQAINYPTVPRGEELLRIAPTPHHTPQMMNYFLE 588


>gi|4758668 serine palmitoyltransferase, long chain base subunit 2
           [Homo sapiens]
          Length = 562

 Score =  187 bits (474), Expect = 2e-47
 Identities = 125/367 (34%), Positives = 191/367 (52%), Gaps = 19/367 (5%)

Query: 66  GILNFCANNYLGLSSHPEVIQ-AGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQ 124
           G++N  + NYLG + +    Q A  + LEE+GAG+ S R   G    H+ LE  +ARF  
Sbjct: 169 GVINMGSYNYLGFARNTGSCQEAAAKVLEEYGAGVCSTRQEIGNLDKHEELEELVARFLG 228

Query: 125 REDAILYPSCYDANAGLFEALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADL 184
            E A+ Y   +  N+    AL+     +LSDELNHAS++ G RL  A    ++H +M  L
Sbjct: 229 VEAAMAYGMGFATNSMNIPALVGKGCLILSDELNHASLVLGARLSGATIRIFKHNNMQSL 288

Query: 185 EAKLQEA---------QKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHA 235
           E  L++A         +  +  L+  +G +SM+G I  L E+  L  +Y A +++DE H+
Sbjct: 289 EKLLKDAIVYGQPRTRRPWKKILILVEGIYSMEGSIVRLPEVIALKKKYKAYLYLDEAHS 348

Query: 236 TGFLGPTGRGTDELLGV-MDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLF 294
            G LGPTGRG  E  G+  + V ++  T  K+  GASGGY  G   L+  LR  +   ++
Sbjct: 349 IGALGPTGRGVVEYFGLDPEDVDVMMGTFTKSF-GASGGYIGGKKELIDYLRTHSHSAVY 407

Query: 295 SNSLPPAVVGCASKALDLLMGSN------TIVQSMAAKTQRFRSKMEAAGFTISG-ASHP 347
           + SL P VV     ++  +MG +        VQ +A  T+ FR +++  GF I G    P
Sbjct: 408 ATSLSPPVVEQIITSMKCIMGQDGTSLGKECVQQLAENTRYFRRRLKEMGFIIYGNEDSP 467

Query: 348 ICPVMLGDARLASRMADDMLKRGIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVEA 407
           + P+ML           +MLKR I V+   +P  P  ++R R  +SA H++E +D  ++ 
Sbjct: 468 VVPLMLYMPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKE 527

Query: 408 FVEVGRL 414
             EVG L
Sbjct: 528 IDEVGDL 534


>gi|119220554 serine palmitoyltransferase, long chain base subunit 3
           [Homo sapiens]
          Length = 552

 Score =  178 bits (452), Expect = 7e-45
 Identities = 117/366 (31%), Positives = 194/366 (53%), Gaps = 19/366 (5%)

Query: 67  ILNFCANNYLGLSS-HPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQR 125
           ++N  + N+LGL++ + E ++     LE +G G++S R   GT   HK LE  +A+F   
Sbjct: 162 VINMGSYNFLGLAAKYDESMRTIKDVLEVYGTGVASTRHEMGTLDKHKELEDLVAKFLNV 221

Query: 126 EDAILYPSCYDANAGLFEALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADLE 185
           E A+++   +  N+    AL+     +LSDELNH S++ G RL  A    ++H +   LE
Sbjct: 222 EAAMVFGMGFATNSMNIPALVGKGCLILSDELNHTSLVLGARLSGATIRIFKHNNTQSLE 281

Query: 186 AKLQEA---------QKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHAT 236
             L++A         +  +  L+  +G +SM+G I  L +I  L  +Y A +++DE H+ 
Sbjct: 282 KLLRDAVIYGQPRTRRAWKKILILVEGVYSMEGSIVHLPQIIALKKKYKAYLYIDEAHSI 341

Query: 237 GFLGPTGRGTDELLGV-MDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFS 295
           G +GPTGRG  E  G+   +V ++  T  K+  GASGGY  G   LV  LR  +   +++
Sbjct: 342 GAVGPTGRGVTEFFGLDPHEVDVLMGTFTKSF-GASGGYIAGRKDLVDYLRVHSHSAVYA 400

Query: 296 NSLPPAVVGCASKALDLLMGSNTI------VQSMAAKTQRFRSKMEAAGFTISGASH-PI 348
           +S+ P +     ++L L+MG +        VQ +A  T+ FR +++  GF I G  +  +
Sbjct: 401 SSMSPPIAEQIIRSLKLIMGLDGTTQGLQRVQQLAKNTRYFRQRLQEMGFIIYGNENASV 460

Query: 349 CPVMLGDARLASRMADDMLKRGIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVEAF 408
            P++L      +  A  ML++ I V+   +P  P  +AR R  +SA H+ E +D  +EA 
Sbjct: 461 VPLLLYMPGKVAAFARHMLEKKIGVVVVGFPATPLAEARARFCVSAAHTREMLDTVLEAL 520

Query: 409 VEVGRL 414
            E+G L
Sbjct: 521 DEMGDL 526


>gi|5454084 serine palmitoyltransferase subunit 1 isoform a [Homo
           sapiens]
          Length = 473

 Score =  136 bits (343), Expect = 3e-32
 Identities = 104/370 (28%), Positives = 175/370 (47%), Gaps = 25/370 (6%)

Query: 68  LNFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQRED 127
           +NF + N+LGL  +P V  A L +L+++G G    R   GT  +H +LE ++A+F + E+
Sbjct: 101 INFASFNFLGLLDNPRVKAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEE 160

Query: 128 AILYPSCYDANAGLFEALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADLEAK 187
           AI+Y   +   A    A     D V  D     +I  G++  ++    ++H DMADLE  
Sbjct: 161 AIIYSYGFATIASAIPAYSKRGDIVFVDRAACFAIQKGLQASRSDIKLFKHNDMADLERL 220

Query: 188 LQEAQ--------KHRL--RLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATG 237
           L+E +        K R+  R +  +G +   G I PL E+  L  +Y A +F++E  + G
Sbjct: 221 LKEQEIEDQKNPRKARVTRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFG 280

Query: 238 FLGPTGRGTDELLGV-MDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSN 296
            LG  GRG  E  G+ +D + +I++ +  AL  + GG+  G   ++   R   + Y FS 
Sbjct: 281 VLGEHGRGVTEHYGINIDDIDLISANMENAL-ASIGGFCCGRSFVIDHQRLSGQGYCFSA 339

Query: 297 SLPPAVVGCASKALDLLMGSNTIVQSMAAKTQRFR------SKMEAAGFTISGASHPICP 350
           SLPP +   A +AL+++  +  I   +  K  +        S ++  G ++S A H    
Sbjct: 340 SLPPLLAAAAIEALNIMEENPGIFAVLKEKCGQIHKALQGISGLKVVGESLSPAFHLQLE 399

Query: 351 VMLG----DARLASRMADDMLKRGIFVIGFSYPVVPK---GKARIRVQISAVHSEEDIDR 403
              G    D RL   + D  + R I +    Y    +       IRV ++   +EE+++R
Sbjct: 400 ESTGSREQDVRLLQEIVDQCMNRSIALTQARYLEKEEKCLPPPSIRVVVTVEQTEEELER 459

Query: 404 CVEAFVEVGR 413
                 EV +
Sbjct: 460 AASTIKEVAQ 469


>gi|30474871 serine palmitoyltransferase subunit 1 isoform b [Homo
           sapiens]
          Length = 143

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 16/41 (39%), Positives = 24/41 (58%)

Query: 68  LNFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGT 108
           +NF + N+LGL  +P V  A L +L+++G G    R   GT
Sbjct: 101 INFASFNFLGLLDNPRVKAAALASLKKYGVGTCGPRGFYGT 141


>gi|4826673 cadherin 6, type 2 preproprotein [Homo sapiens]
          Length = 790

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 3/74 (4%)

Query: 190 EAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATGFLGPTGRGTDEL 249
           E   + L +V +D  + +      +    C    +G    M  CHA   + PTG  T  L
Sbjct: 560 EMSTYLLPVVISDNDYPVQSSTGTVTVRVCACDHHGN---MQSCHAEALIHPTGLSTGAL 616

Query: 250 LGVMDQVTIINSTL 263
           + ++  + I+  T+
Sbjct: 617 VAILLCIVILLVTV 630


>gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Homo
           sapiens]
          Length = 622

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 9/81 (11%)

Query: 41  AGTWKSERVITSRQGPHIRVDGVSGGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLS 100
           AG WK+            R+ GV    L    +  L  +  P V+QA L  LE+ G  + 
Sbjct: 257 AGKWKAAET---------RLFGVPLDSLLEADHKVLPSTQVPLVLQALLSCLEKRGLDME 307

Query: 101 SVRFICGTQSIHKNLEAKIAR 121
            +  + G+Q+  K LE K+ R
Sbjct: 308 GILRVPGSQARVKGLEQKLER 328


>gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Homo
           sapiens]
          Length = 622

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 9/81 (11%)

Query: 41  AGTWKSERVITSRQGPHIRVDGVSGGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLS 100
           AG WK+            R+ GV    L    +  L  +  P V+QA L  LE+ G  + 
Sbjct: 257 AGKWKAAET---------RLFGVPLDSLLEADHKVLPSTQVPLVLQALLSCLEKRGLDME 307

Query: 101 SVRFICGTQSIHKNLEAKIAR 121
            +  + G+Q+  K LE K+ R
Sbjct: 308 GILRVPGSQARVKGLEQKLER 328


>gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [Homo
           sapiens]
          Length = 622

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 9/81 (11%)

Query: 41  AGTWKSERVITSRQGPHIRVDGVSGGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLS 100
           AG WK+            R+ GV    L    +  L  +  P V+QA L  LE+ G  + 
Sbjct: 257 AGKWKAAET---------RLFGVPLDSLLEADHKVLPSTQVPLVLQALLSCLEKRGLDME 307

Query: 101 SVRFICGTQSIHKNLEAKIAR 121
            +  + G+Q+  K LE K+ R
Sbjct: 308 GILRVPGSQARVKGLEQKLER 328


>gi|119120894 Dmx-like 2 [Homo sapiens]
          Length = 3036

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 129 ILYPSCYDANAGLFEALLTPEDAVLSD---ELNHASIIDGIRLCKAHKYRYRH 178
           +L  SC+D    L+   L PED +L +   E   +SI   +     HK R +H
Sbjct: 255 VLLTSCHDGVCRLWAETLLPEDCLLGEQICETTTSSIASSLSHAGRHKDRIQH 307


>gi|114431236 zinc finger protein 462 [Homo sapiens]
          Length = 2506

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 76  LGLSSHPE-VIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQREDAIL 130
           LGLSS    V +A  +   +F   LS V+       I  NL++KI +  Q+EDA++
Sbjct: 663 LGLSSKNNFVAKASRKLANDFPLDLSPVKKRTRIDEIASNLQSKINQTKQQEDAVI 718


>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
          Length = 951

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 168 LCKAHKYRYRHLDMADLEAKLQEAQKHRLRLVATDGAFSMDG 209
           LC   +Y   H D+ + EA+ +E  K     +A DG+++  G
Sbjct: 109 LCDEERYLALHTDLLEEEARQEEEYKRLSEALAEDGSYNAVG 150


>gi|188528618 solute carrier family 6 (neurotransmitter transporter,
           GABA), member 1 [Homo sapiens]
          Length = 599

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 16/58 (27%), Positives = 25/58 (43%)

Query: 58  IRVDGVSGGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNL 115
           + + G   GIL +   N+  LS     + A  Q    +G GL S+  +    S H N+
Sbjct: 259 VTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGLGSLIALGSYNSFHNNV 316


>gi|21314671 transient receptor potential cation channel, subfamily
           M, member 4 [Homo sapiens]
          Length = 1214

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 241 PTGRGTDELLGVMDQVTIINSTLGKALGGASGGYTTG-PGPLVSLLRQRARPYL 293
           P   G+ ELL      T++   L + L G  G   +G PGP  + L QR R YL
Sbjct: 807 PAPPGSLELLLYFWAFTLLCEELRQGLSGGGGSLASGGPGPGHASLSQRLRLYL 860


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,348,721
Number of Sequences: 37866
Number of extensions: 668536
Number of successful extensions: 1502
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1462
Number of HSP's gapped (non-prelim): 19
length of query: 419
length of database: 18,247,518
effective HSP length: 105
effective length of query: 314
effective length of database: 14,271,588
effective search space: 4481278632
effective search space used: 4481278632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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