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Search of human proteins with 75677345
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|75677345 transmembrane protein 98 [Homo sapiens]
(226 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|75677345 transmembrane protein 98 [Homo sapiens] 440 e-124
gi|75677343 transmembrane protein 98 [Homo sapiens] 440 e-124
gi|16554568 cyclin D-type binding-protein 1 isoform 2 [Homo sapi... 52 4e-07
gi|227500367 cyclin D-type binding-protein 1 isoform 1 [Homo sap... 52 4e-07
gi|89030143 PREDICTED: hypothetical protein [Homo sapiens] 30 2.2
gi|122937468 hypothetical LOC642968 [Homo sapiens] 30 2.2
gi|156630992 OTU domain containing 4 protein isoform 3 [Homo sap... 29 3.7
gi|40807496 OTU domain containing 4 protein isoform 1 [Homo sapi... 29 3.7
gi|21735575 junctophilin 1 [Homo sapiens] 28 6.4
gi|91199546 CD63 antigen isoform B [Homo sapiens] 28 6.4
gi|4502679 CD63 antigen isoform A [Homo sapiens] 28 6.4
gi|149944526 additional sex combs like 3 [Homo sapiens] 28 6.4
gi|195976821 dysferlin isoform 2 [Homo sapiens] 28 8.3
gi|4503431 dysferlin isoform 8 [Homo sapiens] 28 8.3
gi|195976779 dysferlin isoform 1 [Homo sapiens] 28 8.3
gi|195976777 dysferlin isoform 3 [Homo sapiens] 28 8.3
gi|195976775 dysferlin isoform 4 [Homo sapiens] 28 8.3
gi|195976773 dysferlin isoform 5 [Homo sapiens] 28 8.3
gi|195976769 dysferlin isoform 6 [Homo sapiens] 28 8.3
gi|195976766 dysferlin isoform 7 [Homo sapiens] 28 8.3
gi|195976764 dysferlin isoform 14 [Homo sapiens] 28 8.3
gi|195976762 dysferlin isoform 13 [Homo sapiens] 28 8.3
gi|195976760 dysferlin isoform 12 [Homo sapiens] 28 8.3
gi|195976758 dysferlin isoform 11 [Homo sapiens] 28 8.3
gi|195976756 dysferlin isoform 10 [Homo sapiens] 28 8.3
gi|195976754 dysferlin isoform 9 [Homo sapiens] 28 8.3
gi|24475849 hypothetical protein LOC203228 isoform b [Homo sapiens] 28 8.3
gi|37039612 hypothetical protein LOC203228 isoform a [Homo sapiens] 28 8.3
>gi|75677345 transmembrane protein 98 [Homo sapiens]
Length = 226
Score = 440 bits (1132), Expect = e-124
Identities = 226/226 (100%), Positives = 226/226 (100%)
Query: 1 METVVIVAIGVLATIFLASFAALVLVCRQRYCRPRDLLQRYDSKPIVDLIGAMETQSEPS 60
METVVIVAIGVLATIFLASFAALVLVCRQRYCRPRDLLQRYDSKPIVDLIGAMETQSEPS
Sbjct: 1 METVVIVAIGVLATIFLASFAALVLVCRQRYCRPRDLLQRYDSKPIVDLIGAMETQSEPS 60
Query: 61 ELELDDVVITNPHIEAILENEDWIEDASGLMSHCIAILKICHTLTEKLVAMTMGSGAKMK 120
ELELDDVVITNPHIEAILENEDWIEDASGLMSHCIAILKICHTLTEKLVAMTMGSGAKMK
Sbjct: 61 ELELDDVVITNPHIEAILENEDWIEDASGLMSHCIAILKICHTLTEKLVAMTMGSGAKMK 120
Query: 121 TSASVSDIIVVAKRISPRVDDVVKSMYPPLDPKLLDARTTALLLSVSHLVLVTRNACHLT 180
TSASVSDIIVVAKRISPRVDDVVKSMYPPLDPKLLDARTTALLLSVSHLVLVTRNACHLT
Sbjct: 121 TSASVSDIIVVAKRISPRVDDVVKSMYPPLDPKLLDARTTALLLSVSHLVLVTRNACHLT 180
Query: 181 GGLDWIDQSLSAAEEHLEVLREAALASEPDKGLPGPEGFLQEQSAI 226
GGLDWIDQSLSAAEEHLEVLREAALASEPDKGLPGPEGFLQEQSAI
Sbjct: 181 GGLDWIDQSLSAAEEHLEVLREAALASEPDKGLPGPEGFLQEQSAI 226
>gi|75677343 transmembrane protein 98 [Homo sapiens]
Length = 226
Score = 440 bits (1132), Expect = e-124
Identities = 226/226 (100%), Positives = 226/226 (100%)
Query: 1 METVVIVAIGVLATIFLASFAALVLVCRQRYCRPRDLLQRYDSKPIVDLIGAMETQSEPS 60
METVVIVAIGVLATIFLASFAALVLVCRQRYCRPRDLLQRYDSKPIVDLIGAMETQSEPS
Sbjct: 1 METVVIVAIGVLATIFLASFAALVLVCRQRYCRPRDLLQRYDSKPIVDLIGAMETQSEPS 60
Query: 61 ELELDDVVITNPHIEAILENEDWIEDASGLMSHCIAILKICHTLTEKLVAMTMGSGAKMK 120
ELELDDVVITNPHIEAILENEDWIEDASGLMSHCIAILKICHTLTEKLVAMTMGSGAKMK
Sbjct: 61 ELELDDVVITNPHIEAILENEDWIEDASGLMSHCIAILKICHTLTEKLVAMTMGSGAKMK 120
Query: 121 TSASVSDIIVVAKRISPRVDDVVKSMYPPLDPKLLDARTTALLLSVSHLVLVTRNACHLT 180
TSASVSDIIVVAKRISPRVDDVVKSMYPPLDPKLLDARTTALLLSVSHLVLVTRNACHLT
Sbjct: 121 TSASVSDIIVVAKRISPRVDDVVKSMYPPLDPKLLDARTTALLLSVSHLVLVTRNACHLT 180
Query: 181 GGLDWIDQSLSAAEEHLEVLREAALASEPDKGLPGPEGFLQEQSAI 226
GGLDWIDQSLSAAEEHLEVLREAALASEPDKGLPGPEGFLQEQSAI
Sbjct: 181 GGLDWIDQSLSAAEEHLEVLREAALASEPDKGLPGPEGFLQEQSAI 226
>gi|16554568 cyclin D-type binding-protein 1 isoform 2 [Homo
sapiens]
Length = 232
Score = 52.0 bits (123), Expect = 4e-07
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 45 PIVDLIGAMETQSEPSELELDDVVITNPHIEAILENED--WIEDASGLMSHCIAILKICH 102
P L+ E + + DDV+ N+D W ED L+ C+A+++
Sbjct: 72 PYSGLLNDTEENNSDNHNHEDDVL-------GFPSNQDLYWSEDDQELIIPCLALVRASK 124
Query: 103 TLTEKLVAMTMGSGAKMKTSASVSDIIVVAKRISPRVDDVVKSMYPPLDPKLLDARTTAL 162
+K + M + K A + DI+ ++ ISP VDD+ S+YPP+ L +A
Sbjct: 125 ACLKK-IRMLVAENGKKDQVAQLDDIVDISDEISPSVDDLALSIYPPM-CHLTVRINSAK 182
Query: 163 LLSVSHLVLVTRNACHLTGGLD--WIDQSLSAAEEHLEVLRE 202
L+SV L A H+T + WI ++A + + ++E
Sbjct: 183 LVSVLKKALEITKASHVTPQPEDSWIPLLINAIDHCMNRIKE 224
>gi|227500367 cyclin D-type binding-protein 1 isoform 1 [Homo
sapiens]
Length = 360
Score = 52.0 bits (123), Expect = 4e-07
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 45 PIVDLIGAMETQSEPSELELDDVVITNPHIEAILENED--WIEDASGLMSHCIAILKICH 102
P L+ E + + DDV+ N+D W ED L+ C+A+++
Sbjct: 200 PYSGLLNDTEENNSDNHNHEDDVL-------GFPSNQDLYWSEDDQELIIPCLALVRASK 252
Query: 103 TLTEKLVAMTMGSGAKMKTSASVSDIIVVAKRISPRVDDVVKSMYPPLDPKLLDARTTAL 162
+K + M + K A + DI+ ++ ISP VDD+ S+YPP+ L +A
Sbjct: 253 ACLKK-IRMLVAENGKKDQVAQLDDIVDISDEISPSVDDLALSIYPPM-CHLTVRINSAK 310
Query: 163 LLSVSHLVLVTRNACHLTGGLD--WIDQSLSAAEEHLEVLRE 202
L+SV L A H+T + WI ++A + + ++E
Sbjct: 311 LVSVLKKALEITKASHVTPQPEDSWIPLLINAIDHCMNRIKE 352
>gi|89030143 PREDICTED: hypothetical protein [Homo sapiens]
Length = 166
Score = 29.6 bits (65), Expect = 2.2
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 5 VIVAIGVLATIFLASFAALVLVCR-QRYCRPRDLLQRYDSKP 45
V++ G+LAT+ L A++ CR Q YC +D + + +P
Sbjct: 6 VVITGGILATVILLCIIAVLCYCRLQYYCCKKDESEEDEEEP 47
>gi|122937468 hypothetical LOC642968 [Homo sapiens]
Length = 166
Score = 29.6 bits (65), Expect = 2.2
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 5 VIVAIGVLATIFLASFAALVLVCR-QRYCRPRDLLQRYDSKP 45
V++ G+LAT+ L A++ CR Q YC +D + + +P
Sbjct: 6 VVITGGILATVILLCIIAVLCYCRLQYYCCKKDESEEDEEEP 47
>gi|156630992 OTU domain containing 4 protein isoform 3 [Homo
sapiens]
Length = 1049
Score = 28.9 bits (63), Expect = 3.7
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 181 GGLDWIDQSLSAAEEHLEVLREAALASEPDKG 212
G + +D+ A EH+ L EA+++S+PD+G
Sbjct: 839 GSVSTVDEFPEARGEHVHSLPEASVSSKPDEG 870
>gi|40807496 OTU domain containing 4 protein isoform 1 [Homo
sapiens]
Length = 1048
Score = 28.9 bits (63), Expect = 3.7
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 181 GGLDWIDQSLSAAEEHLEVLREAALASEPDKG 212
G + +D+ A EH+ L EA+++S+PD+G
Sbjct: 838 GSVSTVDEFPEARGEHVHSLPEASVSSKPDEG 869
>gi|21735575 junctophilin 1 [Homo sapiens]
Length = 661
Score = 28.1 bits (61), Expect = 6.4
Identities = 14/65 (21%), Positives = 27/65 (41%)
Query: 153 KLLDARTTALLLSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPDKG 212
+ ++ A ++ + + + H D DQ+ AA + ++ R A PD
Sbjct: 358 RAIEGAQRAAAMARTKVEIANSRTAHARAKADAADQAALAARQECDIARAVARELSPDFY 417
Query: 213 LPGPE 217
PGP+
Sbjct: 418 QPGPD 422
>gi|91199546 CD63 antigen isoform B [Homo sapiens]
Length = 236
Score = 28.1 bits (61), Expect = 6.4
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 4 VVIVAIGVLATIFLASFAALVLVCRQRYC 32
VVI+A+GV +FL +F C++ YC
Sbjct: 55 VVIIAVGVF--LFLVAFVGCCGACKENYC 81
>gi|4502679 CD63 antigen isoform A [Homo sapiens]
Length = 238
Score = 28.1 bits (61), Expect = 6.4
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 4 VVIVAIGVLATIFLASFAALVLVCRQRYC 32
VVI+A+GV +FL +F C++ YC
Sbjct: 55 VVIIAVGVF--LFLVAFVGCCGACKENYC 81
>gi|149944526 additional sex combs like 3 [Homo sapiens]
Length = 2248
Score = 28.1 bits (61), Expect = 6.4
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 64 LDDVVITNPHIEAILENEDWIEDASGLMSHCIAILKICHTLTEKLVAMTMGSGAKMKTS 122
++DV+ T PHIE +E + E M+ I L++C +L +MT S + K S
Sbjct: 505 MNDVLETLPHIEVKIEGKS--ESPQEEMTVVIDQLEVCDSLIPSTSSMTHVSDTEHKES 561
>gi|195976821 dysferlin isoform 2 [Homo sapiens]
Length = 2081
Score = 27.7 bits (60), Expect = 8.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 164 LSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPDKGLP 214
L HL +T A L G + +L AE+ L LR ALA EP LP
Sbjct: 744 LRTHHLSQITEAALALKLGHSELPAALEQAEDWL--LRLRALAEEPQNSLP 792
>gi|4503431 dysferlin isoform 8 [Homo sapiens]
Length = 2080
Score = 27.7 bits (60), Expect = 8.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 164 LSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPDKGLP 214
L HL +T A L G + +L AE+ L LR ALA EP LP
Sbjct: 743 LRTHHLSQITEAALALKLGHSELPAALEQAEDWL--LRLRALAEEPQNSLP 791
>gi|195976779 dysferlin isoform 1 [Homo sapiens]
Length = 2119
Score = 27.7 bits (60), Expect = 8.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 164 LSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPDKGLP 214
L HL +T A L G + +L AE+ L LR ALA EP LP
Sbjct: 761 LRTHHLSQITEAALALKLGHSELPAALEQAEDWL--LRLRALAEEPQNSLP 809
>gi|195976777 dysferlin isoform 3 [Homo sapiens]
Length = 2067
Score = 27.7 bits (60), Expect = 8.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 164 LSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPDKGLP 214
L HL +T A L G + +L AE+ L LR ALA EP LP
Sbjct: 730 LRTHHLSQITEAALALKLGHSELPAALEQAEDWL--LRLRALAEEPQNSLP 778
>gi|195976775 dysferlin isoform 4 [Homo sapiens]
Length = 2098
Score = 27.7 bits (60), Expect = 8.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 164 LSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPDKGLP 214
L HL +T A L G + +L AE+ L LR ALA EP LP
Sbjct: 761 LRTHHLSQITEAALALKLGHSELPAALEQAEDWL--LRLRALAEEPQNSLP 809
>gi|195976773 dysferlin isoform 5 [Homo sapiens]
Length = 2088
Score = 27.7 bits (60), Expect = 8.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 164 LSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPDKGLP 214
L HL +T A L G + +L AE+ L LR ALA EP LP
Sbjct: 730 LRTHHLSQITEAALALKLGHSELPAALEQAEDWL--LRLRALAEEPQNSLP 778
>gi|195976769 dysferlin isoform 6 [Homo sapiens]
Length = 2102
Score = 27.7 bits (60), Expect = 8.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 164 LSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPDKGLP 214
L HL +T A L G + +L AE+ L LR ALA EP LP
Sbjct: 744 LRTHHLSQITEAALALKLGHSELPAALEQAEDWL--LRLRALAEEPQNSLP 792
>gi|195976766 dysferlin isoform 7 [Homo sapiens]
Length = 2112
Score = 27.7 bits (60), Expect = 8.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 164 LSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPDKGLP 214
L HL +T A L G + +L AE+ L LR ALA EP LP
Sbjct: 775 LRTHHLSQITEAALALKLGHSELPAALEQAEDWL--LRLRALAEEPQNSLP 823
>gi|195976764 dysferlin isoform 14 [Homo sapiens]
Length = 2118
Score = 27.7 bits (60), Expect = 8.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 164 LSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPDKGLP 214
L HL +T A L G + +L AE+ L LR ALA EP LP
Sbjct: 760 LRTHHLSQITEAALALKLGHSELPAALEQAEDWL--LRLRALAEEPQNSLP 808
>gi|195976762 dysferlin isoform 13 [Homo sapiens]
Length = 2097
Score = 27.7 bits (60), Expect = 8.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 164 LSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPDKGLP 214
L HL +T A L G + +L AE+ L LR ALA EP LP
Sbjct: 760 LRTHHLSQITEAALALKLGHSELPAALEQAEDWL--LRLRALAEEPQNSLP 808
>gi|195976760 dysferlin isoform 12 [Homo sapiens]
Length = 2111
Score = 27.7 bits (60), Expect = 8.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 164 LSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPDKGLP 214
L HL +T A L G + +L AE+ L LR ALA EP LP
Sbjct: 774 LRTHHLSQITEAALALKLGHSELPAALEQAEDWL--LRLRALAEEPQNSLP 822
>gi|195976758 dysferlin isoform 11 [Homo sapiens]
Length = 2101
Score = 27.7 bits (60), Expect = 8.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 164 LSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPDKGLP 214
L HL +T A L G + +L AE+ L LR ALA EP LP
Sbjct: 743 LRTHHLSQITEAALALKLGHSELPAALEQAEDWL--LRLRALAEEPQNSLP 791
>gi|195976756 dysferlin isoform 10 [Homo sapiens]
Length = 2087
Score = 27.7 bits (60), Expect = 8.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 164 LSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPDKGLP 214
L HL +T A L G + +L AE+ L LR ALA EP LP
Sbjct: 729 LRTHHLSQITEAALALKLGHSELPAALEQAEDWL--LRLRALAEEPQNSLP 777
>gi|195976754 dysferlin isoform 9 [Homo sapiens]
Length = 2066
Score = 27.7 bits (60), Expect = 8.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 164 LSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPDKGLP 214
L HL +T A L G + +L AE+ L LR ALA EP LP
Sbjct: 729 LRTHHLSQITEAALALKLGHSELPAALEQAEDWL--LRLRALAEEPQNSLP 777
>gi|24475849 hypothetical protein LOC203228 isoform b [Homo sapiens]
Length = 222
Score = 27.7 bits (60), Expect = 8.3
Identities = 9/30 (30%), Positives = 21/30 (70%)
Query: 45 PIVDLIGAMETQSEPSELELDDVVITNPHI 74
P+++L+ +M++ S P E+++ D V+ + I
Sbjct: 182 PVMELLSSMKSHSVPEEIDIADTVLNDDDI 211
>gi|37039612 hypothetical protein LOC203228 isoform a [Homo sapiens]
Length = 481
Score = 27.7 bits (60), Expect = 8.3
Identities = 9/30 (30%), Positives = 21/30 (70%)
Query: 45 PIVDLIGAMETQSEPSELELDDVVITNPHI 74
P+++L+ +M++ S P E+++ D V+ + I
Sbjct: 182 PVMELLSSMKSHSVPEEIDIADTVLNDDDI 211
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,961,566
Number of Sequences: 37866
Number of extensions: 308800
Number of successful extensions: 1024
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1011
Number of HSP's gapped (non-prelim): 30
length of query: 226
length of database: 18,247,518
effective HSP length: 99
effective length of query: 127
effective length of database: 14,498,784
effective search space: 1841345568
effective search space used: 1841345568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.