Guide to the Human Genome
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Name: TMEM98 Sequence: fasta or formatted (226aa) NCBI GI: 75677345
Description:

transmembrane protein 98

Not currently referenced in the text

Other entries for this name:
alt mRNA {226aa} transmembrane protein 98
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         22           2
 C cysteine            2.2          5           1
 D aspartate           6.6         15           2
 E glutamate           7.5         17           2
 F phenylalanine       1.3          3           1
 G glycine             4.4         10           2
 H histidine           2.7          6           1
 I isoleucine          7.5         17           2
 K lysine              4.0          9           1
 L leucine            13.3         30           3
 M methionine          3.1          7           1
 N asparagine          1.3          3           1
 P proline             4.9         11           2
 Q glutamine           2.7          6           1
 R arginine            4.4         10           1
 S serine              8.0         18           1
 T threonine           5.3         12           2
 V valine              8.8         20           2
 W tryptophan          0.9          2           1
 Y tyrosine            1.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 98 
TMEM98                1.000   transmembrane protein 98 
CCNDBP1               0.065   cyclin D-type binding-protein 1 isoform 2 
CCNDBP1               0.065   cyclin D-type binding-protein 1 isoform 1 
LOC643750             0.012   PREDICTED: hypothetical protein 
FAM163B               0.012   hypothetical LOC642968 
OTUD4                 0.010   OTU domain containing 4 protein isoform 3 
OTUD4                 0.010   OTU domain containing 4 protein isoform 1 
JPH1                  0.007   junctophilin 1 
CD63                  0.007   CD63 antigen isoform B 
CD63                  0.007   CD63 antigen isoform A 
ASXL3                 0.007   additional sex combs like 3 
DYSF                  0.007   dysferlin isoform 2 
DYSF                  0.007   dysferlin isoform 8 
DYSF                  0.007   dysferlin isoform 1 
DYSF                  0.007   dysferlin isoform 3 
DYSF                  0.007   dysferlin isoform 4 
DYSF                  0.007   dysferlin isoform 5 
DYSF                  0.007   dysferlin isoform 6 
DYSF                  0.007   dysferlin isoform 7 
DYSF                  0.007   dysferlin isoform 14 
DYSF                  0.007   dysferlin isoform 13 
DYSF                  0.007   dysferlin isoform 12 
DYSF                  0.007   dysferlin isoform 11 
DYSF                  0.007   dysferlin isoform 10 
DYSF                  0.007   dysferlin isoform 9 
C9orf72               0.007   hypothetical protein LOC203228 isoform b 
C9orf72               0.007   hypothetical protein LOC203228 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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