C9orf72 26548

Name: C9orf72	Sequence: fasta or formatted (481aa)		NCBI GI: 37039612
Description: hypothetical protein LOC203228 isoform a		Not currently referenced in the text
Other entries for this name: alt prot {222aa} hypothetical protein LOC203228 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 25 2 C cysteine 1.9 9 1 D aspartate 6.0 29 3 E glutamate 6.4 31 2 F phenylalanine 5.0 24 2 G glycine 5.2 25 1 H histidine 2.9 14 1 I isoleucine 7.5 36 2 K lysine 5.4 26 2 L leucine 11.6 56 2 M methionine 2.5 12 1 N asparagine 3.1 15 1 P proline 4.8 23 3 Q glutamine 3.7 18 1 R arginine 5.0 24 2 S serine 7.5 36 2 T threonine 6.4 31 2 V valine 6.4 31 3 W tryptophan 1.0 5 1 Y tyrosine 2.3 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC203228 isoform a C9orf72 0.449 hypothetical protein LOC203228 isoform b LCLAT1 0.006 lysocardiolipin acyltransferase 1 isoform 1 LCLAT1 0.006 lysocardiolipin acyltransferase 1 isoform 2 PSAP 0.006 prosaposin isoform b preproprotein IKBKAP 0.006 inhibitor of kappa light polypeptide gene enhancer i... NUP107 0.005 nucleoporin 107kDa C9orf131 0.005 hypothetical protein LOC138724 isoform D C9orf131 0.005 hypothetical protein LOC138724 isoform C C9orf131 0.005 hypothetical protein LOC138724 isoform B C9orf131 0.005 hypothetical protein LOC138724 isoform A CORIN 0.005 corin PSAP 0.004 prosaposin isoform c preproprotein WRN 0.004 Werner syndrome protein LOC652522 0.004 PREDICTED: similar to Werner syndrome ATP-dependent... BTAF1 0.004 BTAF1 RNA polymerase II, B-TFIID transcription facto... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.