Guide to the Human Genome
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Name: HNRNPH2 Sequence: fasta or formatted (449aa) NCBI GI: 74099697
Description:

heterogeneous nuclear ribonucleoprotein H2

Referenced in:

hnRNP

Other entries for this name:
alt mRNA [449aa] heterogeneous nuclear ribonucleoprotein H2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         28           2
 C cysteine            1.1          5           1
 D aspartate           5.3         24           2
 E glutamate           6.9         31           3
 F phenylalanine       5.3         24           2
 G glycine            14.5         65           3
 H histidine           2.7         12           1
 I isoleucine          2.9         13           1
 K lysine              3.6         16           2
 L leucine             5.1         23           1
 M methionine          4.0         18           2
 N asparagine          3.8         17           1
 P proline             3.8         17           2
 Q glutamine           3.6         16           2
 R arginine            6.9         31           2
 S serine              9.1         41           2
 T threonine           3.8         17           2
 V valine              5.3         24           2
 W tryptophan          0.4          2           1
 Y tyrosine            5.6         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heterogeneous nuclear ribonucleoprotein H2 
HNRNPH2               1.000   heterogeneous nuclear ribonucleoprotein H2 
HNRNPH1               0.969   heterogeneous nuclear ribonucleoprotein H1 
HNRNPF                0.688   heterogeneous nuclear ribonucleoprotein F 
HNRNPF                0.688   heterogeneous nuclear ribonucleoprotein F 
HNRNPF                0.688   heterogeneous nuclear ribonucleoprotein F 
HNRNPF                0.688   heterogeneous nuclear ribonucleoprotein F 
HNRNPF                0.688   heterogeneous nuclear ribonucleoprotein F 
HNRNPF                0.688   heterogeneous nuclear ribonucleoprotein F 
HNRNPH3               0.430   heterogeneous nuclear ribonucleoprotein H3 isoform a...
HNRNPH3               0.405   heterogeneous nuclear ribonucleoprotein H3 isoform b...
GRSF1                 0.195   G-rich RNA sequence binding factor 1 isoform 1 [Hom...
GRSF1                 0.171   G-rich RNA sequence binding factor 1 isoform 2 [Hom...
ESRP1                 0.116   RNA binding motif protein 35A isoform 5 
ESRP1                 0.116   RNA binding motif protein 35A isoform 3 
ESRP1                 0.116   RNA binding motif protein 35A isoform 4 
ESRP1                 0.116   RNA binding motif protein 35A isoform 2 
ESRP1                 0.116   RNA binding motif protein 35A isoform 1 
ESRP2                 0.102   RNA binding motif protein 35B 
RBM12B                0.066   RNA binding motif protein 12B 
RBM12                 0.063   RNA binding motif protein 12 
RBM12                 0.063   RNA binding motif protein 12 
RBM19                 0.054   RNA binding motif protein 19 
RBM19                 0.054   RNA binding motif protein 19 
RBM19                 0.054   RNA binding motif protein 19 
ILF3                  0.037   interleukin enhancer binding factor 3 isoform d [Ho...
ILF3                  0.037   interleukin enhancer binding factor 3 isoform a [Hom...
HNRNPA0               0.037   heterogeneous nuclear ribonucleoprotein A0 
HNRPDL                0.031   heterogeneous nuclear ribonucleoprotein D-like [Homo...
HNRNPAB               0.031   heterogeneous nuclear ribonucleoprotein A/B isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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