Guide to the Human Genome
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Name: HNRNPH3 Sequence: fasta or formatted (331aa) NCBI GI: 14141159
Description:

heterogeneous nuclear ribonucleoprotein H3 isoform b

Referenced in:

hnRNP

Other entries for this name:
alt prot [346aa] heterogeneous nuclear ribonucleoprotein H3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         16           2
 C cysteine            0.3          1           1
 D aspartate           6.6         22           2
 E glutamate           4.2         14           2
 F phenylalanine       4.8         16           2
 G glycine            23.9         79           4
 H histidine           3.0         10           1
 I isoleucine          4.2         14           1
 K lysine              2.4          8           1
 L leucine             3.6         12           2
 M methionine          4.5         15           1
 N asparagine          4.8         16           2
 P proline             3.9         13           2
 Q glutamine           2.4          8           1
 R arginine            7.6         25           2
 S serine              5.7         19           2
 T threonine           2.7          9           1
 V valine              3.3         11           1
 W tryptophan          0.6          2           1
 Y tyrosine            6.3         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heterogeneous nuclear ribonucleoprotein H3 isoform b... 
HNRNPH3               0.985   heterogeneous nuclear ribonucleoprotein H3 isoform a...
HNRNPH1               0.537   heterogeneous nuclear ribonucleoprotein H1 
HNRNPH2               0.535   heterogeneous nuclear ribonucleoprotein H2 
HNRNPH2               0.535   heterogeneous nuclear ribonucleoprotein H2 
HNRNPF                0.461   heterogeneous nuclear ribonucleoprotein F 
HNRNPF                0.461   heterogeneous nuclear ribonucleoprotein F 
HNRNPF                0.461   heterogeneous nuclear ribonucleoprotein F 
HNRNPF                0.461   heterogeneous nuclear ribonucleoprotein F 
HNRNPF                0.461   heterogeneous nuclear ribonucleoprotein F 
HNRNPF                0.461   heterogeneous nuclear ribonucleoprotein F 
GRSF1                 0.132   G-rich RNA sequence binding factor 1 isoform 1 [Hom...
GRSF1                 0.132   G-rich RNA sequence binding factor 1 isoform 2 [Hom...
RBM12B                0.076   RNA binding motif protein 12B 
ESRP1                 0.075   RNA binding motif protein 35A isoform 5 
ESRP1                 0.075   RNA binding motif protein 35A isoform 3 
ESRP1                 0.075   RNA binding motif protein 35A isoform 4 
ESRP1                 0.075   RNA binding motif protein 35A isoform 2 
ESRP1                 0.075   RNA binding motif protein 35A isoform 1 
FUS                   0.072   fusion (involved in t(12;16) in malignant liposarcoma...
ESRP2                 0.072   RNA binding motif protein 35B 
RBM12                 0.069   RNA binding motif protein 12 
RBM12                 0.069   RNA binding motif protein 12 
TAF15                 0.066   TBP-associated factor 15 isoform 2 
TAF15                 0.066   TBP-associated factor 15 isoform 1 
ILF3                  0.058   interleukin enhancer binding factor 3 isoform d [Ho...
ILF3                  0.058   interleukin enhancer binding factor 3 isoform a [Hom...
KRT9                  0.056   keratin 9 
LOR                   0.054   loricrin 
DHX9                  0.054   DEAH (Asp-Glu-Ala-His) box polypeptide 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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