BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|71999135 methyltransferase 11 domain containing 1 isoform 1 [Homo sapiens] (478 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|71999135 methyltransferase 11 domain containing 1 isoform 1 [... 991 0.0 gi|12232389 methyltransferase 11 domain containing 1 isoform 2 [... 868 0.0 gi|110611923 killer cell immunoglobulin-like receptor, two domai... 31 2.8 gi|21264332 sialyltransferase 7A [Homo sapiens] 30 3.7 gi|40018642 hypothetical protein LOC79133 isoform 1 [Homo sapiens] 30 3.7 gi|40068479 mitochondrial rRNA methyltransferase 1 homolog [Homo... 30 3.7 gi|188528609 secreted frizzled-related protein 5 [Homo sapiens] 30 4.8 gi|239742769 PREDICTED: hypothetical protein XP_002342619 [Homo ... 30 4.8 gi|11095441 aldehyde dehydrogenase 6A1 precursor [Homo sapiens] 30 4.8 gi|239755719 PREDICTED: similar to hCG2003440 [Homo sapiens] 30 6.3 gi|239756622 PREDICTED: polycystic kidney disease 1-like 3 [Homo... 29 8.2 gi|239751108 PREDICTED: polycystic kidney disease 1-like 3 [Homo... 29 8.2 gi|239745596 PREDICTED: polycystin 1-like 3 [Homo sapiens] 29 8.2 gi|31559825 polycystin 1-like 3 [Homo sapiens] 29 8.2 gi|5453563 basic leucine zipper transcription factor, ATF-like [... 29 8.2 gi|195972859 cytohesin 2 isoform 2 [Homo sapiens] 29 8.2 gi|8670546 cytohesin 2 isoform 1 [Homo sapiens] 29 8.2 gi|208609985 SH2 domain containing 3A [Homo sapiens] 29 8.2 gi|30089952 protein tyrosine phosphatase domain containing 1 pro... 29 8.2 >gi|71999135 methyltransferase 11 domain containing 1 isoform 1 [Homo sapiens] Length = 478 Score = 991 bits (2561), Expect = 0.0 Identities = 478/478 (100%), Positives = 478/478 (100%) Query: 1 MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPH 60 MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPH Sbjct: 1 MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPH 60 Query: 61 VRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLEN 120 VRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLEN Sbjct: 61 VRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLEN 120 Query: 121 PDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRAR 180 PDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRAR Sbjct: 121 PDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRAR 180 Query: 181 NPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEP 240 NPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEP Sbjct: 181 NPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEP 240 Query: 241 YIPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTK 300 YIPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTK Sbjct: 241 YIPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTK 300 Query: 301 AGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSW 360 AGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSW Sbjct: 301 AGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSW 360 Query: 361 NKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRH 420 NKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRH Sbjct: 361 NKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRH 420 Query: 421 GRYGGCDQNQWDVAGSCSPRQHLFPQGFVSLCPCQLLGRSFTCAYSVCVSSIYGSGSL 478 GRYGGCDQNQWDVAGSCSPRQHLFPQGFVSLCPCQLLGRSFTCAYSVCVSSIYGSGSL Sbjct: 421 GRYGGCDQNQWDVAGSCSPRQHLFPQGFVSLCPCQLLGRSFTCAYSVCVSSIYGSGSL 478 >gi|12232389 methyltransferase 11 domain containing 1 isoform 2 [Homo sapiens] Length = 456 Score = 868 bits (2244), Expect = 0.0 Identities = 422/422 (100%), Positives = 422/422 (100%) Query: 1 MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPH 60 MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPH Sbjct: 1 MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPH 60 Query: 61 VRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLEN 120 VRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLEN Sbjct: 61 VRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLEN 120 Query: 121 PDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRAR 180 PDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRAR Sbjct: 121 PDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRAR 180 Query: 181 NPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEP 240 NPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEP Sbjct: 181 NPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEP 240 Query: 241 YIPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTK 300 YIPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTK Sbjct: 241 YIPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTK 300 Query: 301 AGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSW 360 AGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSW Sbjct: 301 AGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSW 360 Query: 361 NKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRH 420 NKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRH Sbjct: 361 NKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRH 420 Query: 421 GR 422 GR Sbjct: 421 GR 422 >gi|110611923 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1 [Homo sapiens] Length = 348 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 8/51 (15%) Query: 352 AYHPIPFSWNKKPKEEKFSMVILARGSPEEAHRWPRITQPVLK--RPRHVH 400 ++H P+ W+K +++ G+P + WP T+P K PRH+H Sbjct: 201 SFHDSPYEWSKSSDP----LLVSVTGNPSNS--WPSPTEPSSKTGNPRHLH 245 >gi|21264332 sialyltransferase 7A [Homo sapiens] Length = 600 Score = 30.4 bits (67), Expect = 3.7 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 6/79 (7%) Query: 85 NQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLENPDLSQTEEKLRGAVLHALRKTTYH 144 NQ + W RH P+E R A H+++ L +PD + ++ L + H Sbjct: 460 NQTVMSKNLFWFRH---RPQEAFREALHMDRYLLLHPDFLR---YMKNRFLRSKTLDGAH 513 Query: 145 WQELSYTEGLSLVYMAARL 163 W+ T G L+ A +L Sbjct: 514 WRIYRPTTGALLLLTALQL 532 >gi|40018642 hypothetical protein LOC79133 isoform 1 [Homo sapiens] Length = 345 Score = 30.4 bits (67), Expect = 3.7 Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 11/103 (10%) Query: 190 MDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEPYIPGVFFRQ 249 +D G G G + A + +++ ++ D +AE LK SE+ P + + + Sbjct: 94 LDLGCGRGYI---AQYLNKETIGKFFQAD-------IAENALKNSSETEIPTVSVLADEE 143 Query: 250 FLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFL 292 FLP FD+VVS+ SL + E + + + G F+ Sbjct: 144 FLPFKENT-FDLVVSSLSLHWVNDLPRALEQIHYILKPDGVFI 185 >gi|40068479 mitochondrial rRNA methyltransferase 1 homolog [Homo sapiens] Length = 353 Score = 30.4 bits (67), Expect = 3.7 Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 17/109 (15%) Query: 15 CPGLGVAPQARALAALVPGVTQVDNKSGFLQKR-------------PHRQHPGILKLPHV 61 CP V ++ A A V V D+ +GFLQ + P + P ++P + Sbjct: 182 CPLTPVVSKSSAGAMEVMDVFSTDDLTGFLQTKAQQGWLVAGTVGCPSTEDPQSSEIPIM 241 Query: 62 RLPQALANGAQLLLLGSAGPTMENQVQT----LTSYLWSRHLPVEPEEL 106 + L LL+LG+ G + +VQ L + L R LP E L Sbjct: 242 SCLEFLWERPTLLVLGNEGSGLSQEVQASCQLLLTILPRRQLPPGLESL 290 >gi|188528609 secreted frizzled-related protein 5 [Homo sapiens] Length = 317 Score = 30.0 bits (66), Expect = 4.8 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 8/42 (19%) Query: 338 PCPQLTNLACSF--------SQAYHPIPFSWNKKPKEEKFSM 371 PCPQL +LA SF Q + W+KK KE KF++ Sbjct: 254 PCPQLDSLAGSFLVMGRKVDGQLLLMAVYRWDKKNKEMKFAV 295 >gi|239742769 PREDICTED: hypothetical protein XP_002342619 [Homo sapiens] Length = 351 Score = 30.0 bits (66), Expect = 4.8 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Query: 338 PCPQLTNLACSFSQAYHPIPFSWNKKPKEEKFSMVILARGSPEEAHRW---PRITQPVLK 394 PCP T Q +HP P W ++P + + S+V A +P + W PR Sbjct: 279 PCPPPTRTRMLPPQPWHPPPSYWAQEPSKPR-SLVNAAERAPYGPNPWGWGPRDAFQGGL 337 Query: 395 RPRHVHCHL 403 P + CHL Sbjct: 338 FPPNGSCHL 346 >gi|11095441 aldehyde dehydrogenase 6A1 precursor [Homo sapiens] Length = 535 Score = 30.0 bits (66), Expect = 4.8 Identities = 12/25 (48%), Positives = 19/25 (76%) Query: 294 LVENGTKAGHSLLMDARDLVLKGKE 318 L+++GTK G S+L+D R + +KG E Sbjct: 370 LIDSGTKEGASILLDGRKIKVKGYE 394 >gi|239755719 PREDICTED: similar to hCG2003440 [Homo sapiens] Length = 436 Score = 29.6 bits (65), Expect = 6.3 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Query: 12 GRWCPGLGVAPQARALAALVPGVT----QVDNKSGFLQKRPHRQHPGILKLPHVRL 63 GR PG A A ALAALVPG+T Q + G R + P + LP+ + Sbjct: 256 GRDRPGSRTAGSAAALAALVPGLTASPVQAARREGSSCVRIRPRPPLLSSLPYAEI 311 >gi|239756622 PREDICTED: polycystic kidney disease 1-like 3 [Homo sapiens] Length = 1732 Score = 29.3 bits (64), Expect = 8.2 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 26/107 (24%) Query: 300 KAGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPH-ELPCPQLTNLACSFSQAYHP--- 355 K G L + R ++ G E + +P PH + C QL CSF +A H Sbjct: 4 KGGSWLWLYIRTSIILGSELN----------SPAPHGQNNCYQLNRFQCSFEEAQHYCHV 53 Query: 356 ----IPFSWNKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRH 398 + WNK+ ++ L R EE +W I Q V+ +H Sbjct: 54 QRGFLAHIWNKEVQD-------LIRDYLEEGKKW-WIGQNVMPLKKH 92 >gi|239751108 PREDICTED: polycystic kidney disease 1-like 3 [Homo sapiens] Length = 1731 Score = 29.3 bits (64), Expect = 8.2 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 26/107 (24%) Query: 300 KAGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPH-ELPCPQLTNLACSFSQAYHP--- 355 K G L + R ++ G E + +P PH + C QL CSF +A H Sbjct: 4 KGGSWLWLYIRTSIILGSELN----------SPAPHGQNNCYQLNRFQCSFEEAQHYCHV 53 Query: 356 ----IPFSWNKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRH 398 + WNK+ ++ L R EE +W I Q V+ +H Sbjct: 54 QRGFLAHIWNKEVQD-------LIRDYLEEGKKW-WIGQNVMPLKKH 92 >gi|239745596 PREDICTED: polycystin 1-like 3 [Homo sapiens] Length = 1731 Score = 29.3 bits (64), Expect = 8.2 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 26/107 (24%) Query: 300 KAGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPH-ELPCPQLTNLACSFSQAYHP--- 355 K G L + R ++ G E + +P PH + C QL CSF +A H Sbjct: 4 KGGSWLWLYIRTSIILGSELN----------SPAPHGQNNCYQLNRFQCSFEEAQHYCHV 53 Query: 356 ----IPFSWNKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRH 398 + WNK+ ++ L R EE +W I Q V+ +H Sbjct: 54 QRGFLAHIWNKEVQD-------LIRDYLEEGKKW-WIGQNVMPLKKH 92 >gi|31559825 polycystin 1-like 3 [Homo sapiens] Length = 1732 Score = 29.3 bits (64), Expect = 8.2 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 26/107 (24%) Query: 300 KAGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPH-ELPCPQLTNLACSFSQAYHP--- 355 K G L + R ++ G E + +P PH + C QL CSF +A H Sbjct: 4 KGGSWLWLYIRTSIILGSELN----------SPAPHGQNNCYQLNRFQCSFEEAQHYCHV 53 Query: 356 ----IPFSWNKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRH 398 + WNK+ ++ L R EE +W I Q V+ +H Sbjct: 54 QRGFLAHIWNKEVQD-------LIRDYLEEGKKW-WIGQNVMPLKKH 92 >gi|5453563 basic leucine zipper transcription factor, ATF-like [Homo sapiens] Length = 125 Score = 29.3 bits (64), Expect = 8.2 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 1/81 (1%) Query: 107 QRRARHLEKKFLENPDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGG 166 QR+ + + LE+ DL + LR + + Y L+ E L V A+ Sbjct: 45 QRQTQKADTLHLESEDLEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAASTPSPP 104 Query: 167 FAAVS-RAFHEIRARNPAFQP 186 S AFH+ +P FQP Sbjct: 105 EVVYSAHAFHQPHVSSPRFQP 125 >gi|195972859 cytohesin 2 isoform 2 [Homo sapiens] Length = 399 Score = 29.3 bits (64), Expect = 8.2 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 85 NQVQTLTSYLWSRHLPVEPEELQRRARHLEKKF-LENPDLSQTEE 128 N VQ L +LWS LP E +++ R +++ L NP + Q+ + Sbjct: 139 NLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFQSTD 183 >gi|8670546 cytohesin 2 isoform 1 [Homo sapiens] Length = 400 Score = 29.3 bits (64), Expect = 8.2 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 85 NQVQTLTSYLWSRHLPVEPEELQRRARHLEKKF-LENPDLSQTEE 128 N VQ L +LWS LP E +++ R +++ L NP + Q+ + Sbjct: 139 NLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFQSTD 183 >gi|208609985 SH2 domain containing 3A [Homo sapiens] Length = 576 Score = 29.3 bits (64), Expect = 8.2 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Query: 53 PGILKLPHVRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARH 112 PG + LPHV L G ++ AGP E+ + L + +RH+ + + ++ A Sbjct: 466 PGEVALPHVAPMVRLLEGEEV-----AGPLDESCERLLRTLHGARHMVRDAPKFRKVAAQ 520 Query: 113 LEKKFLENPDLSQ 125 + F NP+L + Sbjct: 521 RLRGFRPNPELRE 533 >gi|30089952 protein tyrosine phosphatase domain containing 1 protein isoform 1 [Homo sapiens] Length = 806 Score = 29.3 bits (64), Expect = 8.2 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 10/94 (10%) Query: 41 SGFLQKRPHRQHPGILKLPHVRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLP 100 S FLQ R H +L+L R L +G+ LL S+ + + ++S + P Sbjct: 17 SSFLQGRRHSTSDPVLRLQQARRGSGLGSGSATKLLSSSSLQV---MVAVSSVSHAEGNP 73 Query: 101 VEPEELQRRARHLEKKFLENPDLSQTEEKLRGAV 134 PE R R+LE+ P ++ E+LR + Sbjct: 74 TFPE----RKRNLER---PTPKYTKVGERLRHVI 100 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.136 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,863,624 Number of Sequences: 37866 Number of extensions: 1061432 Number of successful extensions: 2459 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 2452 Number of HSP's gapped (non-prelim): 21 length of query: 478 length of database: 18,247,518 effective HSP length: 106 effective length of query: 372 effective length of database: 14,233,722 effective search space: 5294944584 effective search space used: 5294944584 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.