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Search of human proteins with 7019567
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7019567 pre-B lymphocyte 3 [Homo sapiens]
(123 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7019567 pre-B lymphocyte 3 [Homo sapiens] 257 1e-69
gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens] 99 8e-22
gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens] 99 8e-22
gi|9507239 immunoglobulin iota chain precursor [Homo sapiens] 87 3e-18
gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens] 72 8e-14
gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo ... 71 2e-13
gi|239757666 PREDICTED: similar to hCG2040021 [Homo sapiens] 70 4e-13
gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens] 67 4e-12
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 64 4e-11
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] 63 5e-11
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ... 63 5e-11
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 63 6e-11
gi|239750741 PREDICTED: hypothetical protein XP_002347521 [Homo ... 59 7e-10
gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens] 55 1e-08
gi|239758119 PREDICTED: similar to hCG2042717 [Homo sapiens] 55 2e-08
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] 52 1e-07
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ... 52 1e-07
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens] 52 1e-07
gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo... 50 3e-07
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 49 1e-06
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens] 49 1e-06
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens] 49 1e-06
gi|239750767 PREDICTED: hypothetical protein XP_002347529 [Homo ... 49 1e-06
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 48 2e-06
gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens] 48 2e-06
gi|239756213 PREDICTED: similar to hCG2042717 [Homo sapiens] 47 4e-06
gi|239750755 PREDICTED: hypothetical protein XP_002347525 [Homo ... 47 4e-06
gi|169207532 PREDICTED: similar to hCG2042717 [Homo sapiens] 47 5e-06
gi|239750748 PREDICTED: hypothetical protein XP_002347523 [Homo ... 47 5e-06
gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo ... 46 6e-06
>gi|7019567 pre-B lymphocyte 3 [Homo sapiens]
Length = 123
Score = 257 bits (657), Expect = 1e-69
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 1 MACRCLSFLLMGTFLSVSQTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQR 60
MACRCLSFLLMGTFLSVSQTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQR
Sbjct: 1 MACRCLSFLLMGTFLSVSQTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQR 60
Query: 61 AGSAPRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVGYG 120
AGSAPRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVGYG
Sbjct: 61 AGSAPRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVGYG 120
Query: 121 FSP 123
FSP
Sbjct: 121 FSP 123
>gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens]
Length = 150
Score = 99.0 bits (245), Expect = 8e-22
Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 16 SVSQTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEE 75
S+SQ VL Q +L PG A+ +CTL + + Y + WYQQ+ GS PRYLL Y+S+
Sbjct: 17 SLSQPVLTQPTSLSASPGASARFTCTLR-SGINVGTYRIYWYQQKPGSLPRYLLRYKSDS 75
Query: 76 DHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVGY 119
D + + +P RFS +KD + NA +L IS +Q ED+ADYYC++ Y
Sbjct: 76 DKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWY 119
>gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens]
Length = 150
Score = 99.0 bits (245), Expect = 8e-22
Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 16 SVSQTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEE 75
S+SQ VL Q +L PG A+ +CTL + + Y + WYQQ+ GS PRYLL Y+S+
Sbjct: 17 SLSQPVLTQPTSLSASPGASARFTCTLR-SGINVGTYRIYWYQQKPGSLPRYLLRYKSDS 75
Query: 76 DHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVGY 119
D + + +P RFS +KD + NA +L IS +Q ED+ADYYC++ Y
Sbjct: 76 DKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWY 119
>gi|9507239 immunoglobulin iota chain precursor [Homo sapiens]
Length = 145
Score = 87.0 bits (214), Expect = 3e-18
Identities = 47/100 (47%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 19 QTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEEDHH 78
Q VL Q A+ G +L+CTL H I Y V WYQQR G PR+LL Y S+ D
Sbjct: 20 QPVLHQPPAMSSALGTTIRLTCTLRNDH-DIGVYSVYWYQQRPGHPPRFLLRYFSQSDKS 78
Query: 79 RPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVG 118
+ +P RFS +KD A N L+IS +QPED+A YYC++G
Sbjct: 79 QGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMG 118
>gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens]
Length = 288
Score = 72.4 bits (176), Expect = 8e-14
Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 8/111 (7%)
Query: 6 LSFLLMGTFLSVSQTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAP 65
L+ L GT S +Q+ L Q ++ PGQ +SCT + V +Y VSWYQQ G AP
Sbjct: 8 LTLLTQGTG-SWAQSALTQPASVSGSPGQSITISCTGTSSDVGGYNY-VSWYQQHPGKAP 65
Query: 66 RYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCS 116
+ ++Y S +RP+ + +RFS +K + N LTIS +Q ED+ADYYCS
Sbjct: 66 KLMIYDVS----NRPSGVSNRFSGSK--SGNTASLTISGLQAEDEADYYCS 110
Score = 66.2 bits (160), Expect = 6e-12
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 16 SVSQTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEE 75
SV+ L Q A+ V PGQ A++SC+ +RD WY Q+ G AP ++Y +
Sbjct: 195 SVASYELTQPPAVSVSPGQTARISCSGD----VLRDNYADWYPQKPGQAPVLVIY----K 246
Query: 76 DHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVG 118
D RP+ IP+RFS + + N LTIS V + ADYYC G
Sbjct: 247 DGERPSGIPERFSGS--TSGNTTALTISRVLTKGGADYYCFSG 287
>gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo
sapiens]
Length = 264
Score = 70.9 bits (172), Expect = 2e-13
Identities = 45/115 (39%), Positives = 67/115 (58%), Gaps = 13/115 (11%)
Query: 7 SFLLMGTFL-----SVSQTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRA 61
SF L+ T L S +Q+VL Q + PGQ +SC+ S ++ V+WYQQ
Sbjct: 29 SFPLLLTLLTHCAGSWAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNT--VNWYQQLP 86
Query: 62 GSAPRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCS 116
G+AP+ L+Y ++ RP+ +PDRFS +K + + L IS +Q ED+ADYYC+
Sbjct: 87 GTAPKLLIY----SNNQRPSGVPDRFSGSK--SGTSASLAISGLQSEDEADYYCA 135
>gi|239757666 PREDICTED: similar to hCG2040021 [Homo sapiens]
Length = 137
Score = 70.1 bits (170), Expect = 4e-13
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 10/102 (9%)
Query: 16 SVSQTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEE 75
SV+ VL Q ++ V PG+ A+++C + I V WYQQ+ G AP ++Y +
Sbjct: 17 SVTSYVLTQPPSVSVAPGKTARITCGGN----NIGSKSVHWYQQKPGQAPVLVVY----D 68
Query: 76 DHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSV 117
D RP+ IP+RFS + + N LTIS V+ D+ADYYC V
Sbjct: 69 DSDRPSGIPERFSGSN--SGNTATLTISRVEAGDEADYYCQV 108
>gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens]
Length = 645
Score = 66.6 bits (161), Expect = 4e-12
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 10/107 (9%)
Query: 9 LLMGTFLSVSQTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYL 68
LL+ +SV+ L Q ++ V PGQ A+++C+ V + Y W+QQ+ G AP +
Sbjct: 479 LLILCTVSVASYELTQPSSVSVSPGQTARITCS---GDVLAKKYA-RWFQQKPGQAPVLV 534
Query: 69 LYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYC 115
+Y +D RP+ IP+RFS + + LTIS Q ED+ADYYC
Sbjct: 535 IY----KDSERPSGIPERFSGSS--SGTTVTLTISGAQVEDEADYYC 575
Score = 33.9 bits (76), Expect = 0.032
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 25/95 (26%)
Query: 43 SPQHVTIRDYGVS--------WYQQRAGSAPRYLLYYRSEEDHHRPADIPDRFS-----A 89
SPQHV D G S + SAPR L + H P +
Sbjct: 331 SPQHVPCVDVGASPGVADVLQGFDAADASAPRSAL----TQPHSVPGSPGQSVTISCTGT 386
Query: 90 AKDEAH--------NACVLTISPVQPEDDADYYCS 116
+ D H N +TIS +Q ED+ADYYCS
Sbjct: 387 SSDVGHYNYVSCSGNMASMTISGLQAEDEADYYCS 421
>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 151
Score = 63.5 bits (153), Expect = 4e-11
Identities = 46/119 (38%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 6 LSFLLMGTFLSVSQTVLAQLDALL-VFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSA 64
L LL+ + + V+ Q A L + PG+ A LSC S ++ +SWYQQ+ G A
Sbjct: 8 LFLLLLWLPDTTGEIVMTQSPATLSLSPGERATLSCRASQ---SVSSSYLSWYQQKPGQA 64
Query: 65 PRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVGYGFSP 123
PR L+Y S R IP RFS + LTIS +QPED A YYC Y P
Sbjct: 65 PRLLIYGAST----RATGIPARFSGSGSGTD--FTLTISSLQPEDFAVYYCQQDYNLPP 117
>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
Length = 152
Score = 63.2 bits (152), Expect = 5e-11
Identities = 48/119 (40%), Positives = 63/119 (52%), Gaps = 11/119 (9%)
Query: 6 LSFLLMGTFLSVSQTVLAQLDALL-VFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSA 64
L LL+ + + VL Q A L + PG+ A LSC S ++ ++WYQQ+ G A
Sbjct: 8 LFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCGASQ---SVSSSYLAWYQQKPGLA 64
Query: 65 PRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVGYGFSP 123
PR L+Y S R IPDRFS + + LTIS ++PED A YYC YG SP
Sbjct: 65 PRLLIYDASS----RATGIPDRFSGS--GSGTDFTLTISRLEPEDFAVYYCQ-QYGSSP 116
>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
sapiens]
Length = 152
Score = 63.2 bits (152), Expect = 5e-11
Identities = 48/119 (40%), Positives = 63/119 (52%), Gaps = 11/119 (9%)
Query: 6 LSFLLMGTFLSVSQTVLAQLDALL-VFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSA 64
L LL+ + + VL Q A L + PG+ A LSC S ++ ++WYQQ+ G A
Sbjct: 8 LFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCGASQ---SVSSSYLAWYQQKPGLA 64
Query: 65 PRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVGYGFSP 123
PR L+Y S R IPDRFS + + LTIS ++PED A YYC YG SP
Sbjct: 65 PRLLIYDASS----RATGIPDRFSGS--GSGTDFTLTISRLEPEDFAVYYCQ-QYGSSP 116
>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 157
Score = 62.8 bits (151), Expect = 6e-11
Identities = 43/106 (40%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 19 QTVLAQLDALL-VFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEEDH 77
+ V+ Q A L + PG+ A LSC S ++ +SWYQQ+ G APR L+Y S
Sbjct: 26 EIVMTQSPATLSLSPGERATLSCRASQ---SVSSSYLSWYQQKPGQAPRLLIYGAST--- 79
Query: 78 HRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVGYGFSP 123
R IP RFS + LTIS +QPED A YYC Y P
Sbjct: 80 -RATGIPARFSGSGSGTD--FTLTISSLQPEDFAVYYCQQDYNLPP 122
>gi|239750741 PREDICTED: hypothetical protein XP_002347521 [Homo
sapiens]
Length = 151
Score = 59.3 bits (142), Expect = 7e-10
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 3 CRCLSFLLMGTFLSVSQTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAG 62
C L L + +++ +SQ L + LV P Q L+CT S ++ GV W +Q G
Sbjct: 5 CSTLLLLTIPSWV-LSQITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPG 63
Query: 63 SAPRYL-LYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCS 116
A +L L Y +++ + P+ + R + KD + N VLT++ + P D A YYC+
Sbjct: 64 KALEWLALIYWNDDKRYSPS-LKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCA 117
>gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens]
Length = 142
Score = 55.5 bits (132), Expect = 1e-08
Identities = 46/125 (36%), Positives = 57/125 (45%), Gaps = 23/125 (18%)
Query: 16 SVSQTVLAQLDALLVF--PGQVAQLSCTLSPQ--------HVTIR---DYGVS----WYQ 58
S+ V AQL LL+ PG + T SP VTI G+S WYQ
Sbjct: 9 SMDMRVPAQLLGLLLLWLPGTRCDIQMTQSPSSLSASVGDRVTITCRASQGISNSLAWYQ 68
Query: 59 QRAGSAPRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVG 118
Q+ G AP+ LLY S + + +P RFS + LTIS +QPED A YYC
Sbjct: 69 QKPGKAPKLLLYAASRLE----SGVPSRFSGSGSGTDYT--LTISSLQPEDFATYYCQQY 122
Query: 119 YGFSP 123
Y P
Sbjct: 123 YSTPP 127
>gi|239758119 PREDICTED: similar to hCG2042717 [Homo sapiens]
Length = 196
Score = 54.7 bits (130), Expect = 2e-08
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 19 QTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEEDHH 78
Q L + LV PG +LSC S T DY +SW +Q G ++ Y S +
Sbjct: 30 QVQLVESGGGLVKPGGSLRLSCAASG--FTFSDYYMSWIRQAPGKGLEWVSYISSSSSYT 87
Query: 79 RPAD-IPDRFSAAKDEAHNACVLTISPVQPEDDADYYCS 116
AD + RF+ ++D A N+ L ++ ++ ED A YYC+
Sbjct: 88 NYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCA 126
>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 51.6 bits (122), Expect = 1e-07
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 53 GVSWYQQRAGSAPRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDAD 112
G+SWYQQ+ G AP L+Y S + +P RFS + + LTIS +QPED A
Sbjct: 54 GLSWYQQKPGQAPTLLIYAASS----LQSGVPSRFSGS--GSGTDFTLTISSLQPEDVAT 107
Query: 113 YYCSVGY 119
YYC Y
Sbjct: 108 YYCLQDY 114
>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
sapiens]
Length = 155
Score = 51.6 bits (122), Expect = 1e-07
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 53 GVSWYQQRAGSAPRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDAD 112
G+SWYQQ+ G AP L+Y S + +P RFS + + LTIS +QPED A
Sbjct: 54 GLSWYQQKPGQAPTLLIYAASS----LQSGVPSRFSGS--GSGTDFTLTISSLQPEDVAT 107
Query: 113 YYCSVGY 119
YYC Y
Sbjct: 108 YYCLQDY 114
>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 51.6 bits (122), Expect = 1e-07
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 53 GVSWYQQRAGSAPRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDAD 112
G+SWYQQ+ G AP L+Y S + +P RFS + + LTIS +QPED A
Sbjct: 54 GLSWYQQKPGQAPTLLIYAASS----LQSGVPSRFSGS--GSGTDFTLTISSLQPEDVAT 107
Query: 113 YYCSVGY 119
YYC Y
Sbjct: 108 YYCLQDY 114
>gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo
sapiens]
Length = 123
Score = 50.4 bits (119), Expect = 3e-07
Identities = 43/120 (35%), Positives = 54/120 (45%), Gaps = 23/120 (19%)
Query: 21 VLAQLDALLVF--PGQVAQLSCTLSPQ--------HVTIR---DYGVS----WYQQRAGS 63
V AQL LL+ PG + T SP VTI G+S WYQQ+ G
Sbjct: 5 VPAQLLGLLLLWLPGARCDIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGK 64
Query: 64 APRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVGYGFSP 123
AP+ L+Y S + +P RFS + LTIS +QPED A YYC + P
Sbjct: 65 APKLLIYAASTLQ----SGVPSRFSGSGSGTE--FTLTISSLQPEDFATYYCQQLNSYPP 118
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 48.9 bits (115), Expect = 1e-06
Identities = 43/117 (36%), Positives = 51/117 (43%), Gaps = 23/117 (19%)
Query: 24 QLDALLVF--PGQVAQLSCTLSPQ--------HVTIR---DYGVS----WYQQRAGSAPR 66
QL LLV PG + T SP VTI G+S WYQQ+ G P+
Sbjct: 179 QLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPK 238
Query: 67 YLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVGYGFSP 123
L+Y S + IP RFS + LTIS +QPED A YYC SP
Sbjct: 239 LLIYAASSLQ----SGIPSRFSDSGSGTDYT--LTISSLQPEDFATYYCQQSDSTSP 289
>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 48.9 bits (115), Expect = 1e-06
Identities = 43/117 (36%), Positives = 51/117 (43%), Gaps = 23/117 (19%)
Query: 24 QLDALLVF--PGQVAQLSCTLSPQ--------HVTIR---DYGVS----WYQQRAGSAPR 66
QL LLV PG + T SP VTI G+S WYQQ+ G P+
Sbjct: 125 QLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPK 184
Query: 67 YLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVGYGFSP 123
L+Y S + IP RFS + LTIS +QPED A YYC SP
Sbjct: 185 LLIYAASSLQ----SGIPSRFSDSGSGTDYT--LTISSLQPEDFATYYCQQSDSTSP 235
>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 48.9 bits (115), Expect = 1e-06
Identities = 43/117 (36%), Positives = 51/117 (43%), Gaps = 23/117 (19%)
Query: 24 QLDALLVF--PGQVAQLSCTLSPQ--------HVTIR---DYGVS----WYQQRAGSAPR 66
QL LLV PG + T SP VTI G+S WYQQ+ G P+
Sbjct: 125 QLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPK 184
Query: 67 YLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVGYGFSP 123
L+Y S + IP RFS + LTIS +QPED A YYC SP
Sbjct: 185 LLIYAASSLQ----SGIPSRFSDSGSGTDYT--LTISSLQPEDFATYYCQQSDSTSP 235
>gi|239750767 PREDICTED: hypothetical protein XP_002347529 [Homo
sapiens]
Length = 184
Score = 48.5 bits (114), Expect = 1e-06
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 29 LVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEEDHHRPADIPDRFS 88
LV PG +LSC S T DY ++W +Q G ++ S + + RF+
Sbjct: 51 LVKPGGSLRLSCAASG--FTFSDYYMNWVRQAPGKGLEWVSSISSSSTIYYADSVKGRFT 108
Query: 89 AAKDEAHNACVLTISPVQPEDDADYYCS 116
++D A N+ L ++ ++ ED A YYC+
Sbjct: 109 ISRDNAKNSLYLQMNSLRAEDTAVYYCA 136
>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
sapiens]
Length = 636
Score = 48.1 bits (113), Expect = 2e-06
Identities = 42/117 (35%), Positives = 51/117 (43%), Gaps = 23/117 (19%)
Query: 16 SVSQTVLAQLDALLVF--PGQVAQLSCTLSPQ--------HVTIR---DYGVS----WYQ 58
S+ QL LLV PG + T SP VTI G+S WYQ
Sbjct: 511 SIDMRAPTQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQ 570
Query: 59 QRAGSAPRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYC 115
Q+ G P+ L+Y S + IP RFS + A LTI +QPED A YYC
Sbjct: 571 QKPGKTPKLLIYAASS----LQSGIPSRFSDSGSGAD--YTLTIRSLQPEDFATYYC 621
>gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 295
Score = 47.8 bits (112), Expect = 2e-06
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 54 VSWYQQRAGSAPRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADY 113
++WYQQ+ G P+ L+Y S + IP RFS + A LTIS +QPED A Y
Sbjct: 225 LNWYQQKPGKTPKLLIYAASS----LQSGIPSRFSDSGSGAD--YTLTISSLQPEDFAAY 278
Query: 114 YC 115
YC
Sbjct: 279 YC 280
>gi|239756213 PREDICTED: similar to hCG2042717 [Homo sapiens]
Length = 256
Score = 47.0 bits (110), Expect = 4e-06
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 29 LVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEEDHHRPAD-IPDRF 87
LV PG +LSC S T Y ++W +Q G ++ S + AD + RF
Sbjct: 54 LVKPGGSLRLSCAASG--FTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRF 111
Query: 88 SAAKDEAHNACVLTISPVQPEDDADYYCS 116
+ ++D A N+ L ++ ++ ED A YYC+
Sbjct: 112 TISRDNAKNSLYLQMNSLRAEDTAVYYCA 140
>gi|239750755 PREDICTED: hypothetical protein XP_002347525 [Homo
sapiens]
Length = 232
Score = 47.0 bits (110), Expect = 4e-06
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 29 LVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEEDHHRPAD-IPDRF 87
LV PG +LSC S T Y ++W +Q G ++ S + AD + RF
Sbjct: 30 LVKPGGSLRLSCAASG--FTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRF 87
Query: 88 SAAKDEAHNACVLTISPVQPEDDADYYCS 116
+ ++D A N+ L ++ ++ ED A YYC+
Sbjct: 88 TISRDNAKNSLYLQMNSLRAEDTAVYYCA 116
>gi|169207532 PREDICTED: similar to hCG2042717 [Homo sapiens]
Length = 218
Score = 46.6 bits (109), Expect = 5e-06
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 19 QTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEEDHH 78
Q L + +V PG+ +LSC S T YG+ W +Q G ++ + +
Sbjct: 65 QVQLVESGGGVVQPGRSLRLSCAASG--FTFSSYGMHWVRQAPGKGLEWVAVISYDGSNK 122
Query: 79 RPAD-IPDRFSAAKDEAHNACVLTISPVQPEDDADYYCS 116
AD + RF+ ++D + N L ++ ++ ED A YYC+
Sbjct: 123 YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA 161
>gi|239750748 PREDICTED: hypothetical protein XP_002347523 [Homo
sapiens]
Length = 260
Score = 46.6 bits (109), Expect = 5e-06
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 29 LVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEEDHHRPADIPDRFS 88
LV PG +LSC S T Y + W +Q G ++ + D + P + RF+
Sbjct: 143 LVQPGGSLRLSCAASG--FTFSSYDMHWVRQATGKGLEWVSAIGTAGDTYYPGSVKGRFT 200
Query: 89 AAKDEAHNACVLTISPVQPEDDADYYCS 116
+++ A N+ L ++ ++ D A YYC+
Sbjct: 201 ISRENAKNSLYLQMNSLRAGDTAVYYCA 228
>gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo
sapiens]
Length = 162
Score = 46.2 bits (108), Expect = 6e-06
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 54 VSWYQQRAGSAPRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADY 113
++WYQQ+ G AP+ L+Y S +P FS + E+ LTIS +QP+D A Y
Sbjct: 105 LAWYQQKPGKAPKLLIYRVSS----LQTGVPSLFSGS--ESGTDFTLTISSLQPDDVATY 158
Query: 114 YC 115
YC
Sbjct: 159 YC 160
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.136 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,096,034
Number of Sequences: 37866
Number of extensions: 214562
Number of successful extensions: 637
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 520
Number of HSP's gapped (non-prelim): 120
length of query: 123
length of database: 18,247,518
effective HSP length: 89
effective length of query: 34
effective length of database: 14,877,444
effective search space: 505833096
effective search space used: 505833096
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.