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Search of human proteins with 66346656
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|66346656 proline rich 5 (renal) isoform 3 [Homo sapiens]
(293 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|66346658 proline rich 5 (renal) isoform 3 [Homo sapiens] 587 e-168
gi|66346656 proline rich 5 (renal) isoform 3 [Homo sapiens] 587 e-168
gi|66346654 proline rich 5 (renal) isoform 2 [Homo sapiens] 587 e-168
gi|31317218 proline rich 5 (renal) isoform 1 [Homo sapiens] 587 e-168
gi|31317214 proline rich 5 (renal) isoform 2 [Homo sapiens] 587 e-168
gi|237757349 protor-2 isoform a [Homo sapiens] 149 3e-36
gi|237757351 protor-2 isoform a [Homo sapiens] 149 3e-36
gi|237757356 protor-2 isoform c [Homo sapiens] 99 4e-21
gi|237757353 protor-2 isoform b [Homo sapiens] 81 1e-15
gi|110227615 echinoderm microtubule associated protein like 3 [H... 39 0.004
gi|110815800 WD repeat domain 32 [Homo sapiens] 36 0.046
gi|5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform... 36 0.046
gi|13430848 nuclear receptor subfamily 1, group D, member 1 [Hom... 36 0.046
gi|46243671 G protein-coupled receptor 152 [Homo sapiens] 36 0.046
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 35 0.060
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 35 0.060
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 35 0.060
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 35 0.10
gi|221139926 NHS-like 1 [Homo sapiens] 34 0.13
gi|20070193 nuclear receptor subfamily 5, group A, member 1 [Hom... 34 0.13
gi|157785645 SPEG complex locus [Homo sapiens] 34 0.13
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote... 34 0.17
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 33 0.23
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 33 0.23
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 33 0.23
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 33 0.23
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 33 0.23
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 33 0.23
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 33 0.23
gi|119943102 CREB binding protein isoform b [Homo sapiens] 33 0.23
>gi|66346658 proline rich 5 (renal) isoform 3 [Homo sapiens]
Length = 293
Score = 587 bits (1514), Expect = e-168
Identities = 293/293 (100%), Positives = 293/293 (100%)
Query: 1 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 60
MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA
Sbjct: 1 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 60
Query: 61 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 120
ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY
Sbjct: 61 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 120
Query: 121 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 180
GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG
Sbjct: 121 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 180
Query: 181 TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP 240
TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP
Sbjct: 181 TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP 240
Query: 241 TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV 293
TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV
Sbjct: 241 TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV 293
>gi|66346656 proline rich 5 (renal) isoform 3 [Homo sapiens]
Length = 293
Score = 587 bits (1514), Expect = e-168
Identities = 293/293 (100%), Positives = 293/293 (100%)
Query: 1 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 60
MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA
Sbjct: 1 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 60
Query: 61 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 120
ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY
Sbjct: 61 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 120
Query: 121 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 180
GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG
Sbjct: 121 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 180
Query: 181 TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP 240
TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP
Sbjct: 181 TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP 240
Query: 241 TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV 293
TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV
Sbjct: 241 TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV 293
>gi|66346654 proline rich 5 (renal) isoform 2 [Homo sapiens]
Length = 379
Score = 587 bits (1514), Expect = e-168
Identities = 293/293 (100%), Positives = 293/293 (100%)
Query: 1 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 60
MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA
Sbjct: 87 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 146
Query: 61 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 120
ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY
Sbjct: 147 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 206
Query: 121 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 180
GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG
Sbjct: 207 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 266
Query: 181 TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP 240
TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP
Sbjct: 267 TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP 326
Query: 241 TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV 293
TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV
Sbjct: 327 TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV 379
>gi|31317218 proline rich 5 (renal) isoform 1 [Homo sapiens]
Length = 388
Score = 587 bits (1514), Expect = e-168
Identities = 293/293 (100%), Positives = 293/293 (100%)
Query: 1 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 60
MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA
Sbjct: 96 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 155
Query: 61 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 120
ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY
Sbjct: 156 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 215
Query: 121 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 180
GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG
Sbjct: 216 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 275
Query: 181 TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP 240
TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP
Sbjct: 276 TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP 335
Query: 241 TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV 293
TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV
Sbjct: 336 TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV 388
>gi|31317214 proline rich 5 (renal) isoform 2 [Homo sapiens]
Length = 379
Score = 587 bits (1514), Expect = e-168
Identities = 293/293 (100%), Positives = 293/293 (100%)
Query: 1 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 60
MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA
Sbjct: 87 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 146
Query: 61 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 120
ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY
Sbjct: 147 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 206
Query: 121 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 180
GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG
Sbjct: 207 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 266
Query: 181 TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP 240
TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP
Sbjct: 267 TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP 326
Query: 241 TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV 293
TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV
Sbjct: 327 TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV 379
>gi|237757349 protor-2 isoform a [Homo sapiens]
Length = 368
Score = 149 bits (376), Expect = 3e-36
Identities = 83/193 (43%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Query: 1 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 60
+ + +KI+ EG+ ++ LAE WD FF++ LP LQAIFYPVQG+E ++RQ++LL FR+
Sbjct: 106 LFFVEEKIKLCEGENRIEVLAEVWDHFFTETLPTLQAIFYPVQGQELTIRQISLLGFRDL 165
Query: 61 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 120
+ L VKL D L A +++P +IVQMLL+LQ VHE G +E YL+LE LV++VVSP+LG
Sbjct: 166 VLLKVKLGDLLLLAQSKLPSSIVQMLLILQSVHEPTGPSESYLQLEELVKQVVSPFLGIS 225
Query: 121 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 180
G S GP T++ +R + A S+ N +L P+ E E E
Sbjct: 226 GDRSFSGP-TYTLARRHSRVRPKVTVLNYASPITAVSRPLNEMVLTPLTEQEGEAYLEKC 284
Query: 181 TSIRRHSVSEMTS 193
S+RRH+V+ S
Sbjct: 285 GSVRRHTVANAHS 297
>gi|237757351 protor-2 isoform a [Homo sapiens]
Length = 368
Score = 149 bits (376), Expect = 3e-36
Identities = 83/193 (43%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Query: 1 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 60
+ + +KI+ EG+ ++ LAE WD FF++ LP LQAIFYPVQG+E ++RQ++LL FR+
Sbjct: 106 LFFVEEKIKLCEGENRIEVLAEVWDHFFTETLPTLQAIFYPVQGQELTIRQISLLGFRDL 165
Query: 61 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 120
+ L VKL D L A +++P +IVQMLL+LQ VHE G +E YL+LE LV++VVSP+LG
Sbjct: 166 VLLKVKLGDLLLLAQSKLPSSIVQMLLILQSVHEPTGPSESYLQLEELVKQVVSPFLGIS 225
Query: 121 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 180
G S GP T++ +R + A S+ N +L P+ E E E
Sbjct: 226 GDRSFSGP-TYTLARRHSRVRPKVTVLNYASPITAVSRPLNEMVLTPLTEQEGEAYLEKC 284
Query: 181 TSIRRHSVSEMTS 193
S+RRH+V+ S
Sbjct: 285 GSVRRHTVANAHS 297
>gi|237757356 protor-2 isoform c [Homo sapiens]
Length = 205
Score = 99.0 bits (245), Expect = 4e-21
Identities = 46/90 (51%), Positives = 67/90 (74%)
Query: 1 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 60
+ + +KI+ EG+ ++ LAE WD FF++ LP LQAIFYPVQG+E ++RQ++LL FR+
Sbjct: 106 LFFVEEKIKLCEGENRIEVLAEVWDHFFTETLPTLQAIFYPVQGQELTIRQISLLGFRDL 165
Query: 61 ITLSVKLEDALARAHARVPPAIVQMLLVLQ 90
+ L VKL D L A +++P +IVQMLL+LQ
Sbjct: 166 VLLKVKLGDLLLLAQSKLPSSIVQMLLILQ 195
>gi|237757353 protor-2 isoform b [Homo sapiens]
Length = 240
Score = 81.3 bits (199), Expect = 1e-15
Identities = 59/193 (30%), Positives = 83/193 (43%), Gaps = 48/193 (24%)
Query: 1 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 60
+ + +KI+ EG+ ++ LAE WD FF++ LP LQAIFYPV
Sbjct: 25 LFFVEEKIKLCEGENRIEVLAEVWDHFFTETLPTLQAIFYPV------------------ 66
Query: 61 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 120
Q VHE G +E YL+LE LV++VVSP+LG
Sbjct: 67 -----------------------------QSVHEPTGPSESYLQLEELVKQVVSPFLGIS 97
Query: 121 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 180
G S GP T++ +R + A S+ N +L P+ E E E
Sbjct: 98 GDRSFSGP-TYTLARRHSRVRPKVTVLNYASPITAVSRPLNEMVLTPLTEQEGEAYLEKC 156
Query: 181 TSIRRHSVSEMTS 193
S+RRH+V+ S
Sbjct: 157 GSVRRHTVANAHS 169
>gi|110227615 echinoderm microtubule associated protein like 3 [Homo
sapiens]
Length = 896
Score = 39.3 bits (90), Expect = 0.004
Identities = 36/103 (34%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 195 PEPQGFSDPPG--QGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPEN 252
P PQG S+ P Q G SS A GP P L P QPP++ P R+S SSP
Sbjct: 107 PAPQGASEEPSGTQSEGGGSSSSGAGSPGP-PGILRP-LQPPQRADTPRRNSSSSSSPSE 164
Query: 253 LVDQILESVDSDSEGIFIDFG----RGRGSGMSDLEGSGGRQS 291
Q L S + + G RG +S G G R+S
Sbjct: 165 RPRQKLSRKAISSANLLVRSGSTESRGGKDPLSSPGGPGSRRS 207
>gi|110815800 WD repeat domain 32 [Homo sapiens]
Length = 559
Score = 35.8 bits (81), Expect = 0.046
Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 8/62 (12%)
Query: 197 PQGFSDPPGQGPTGTFRSSPAPHSGPC-----PSRLYP---TTQPPEQGLDPTRSSLPRS 248
P G P G G G P PH G PS L+P T PP P R P
Sbjct: 3 PFGPHSPGGDGSAGAGAEEPTPHEGQAAATGPPSPLHPGADATHPPPPARSPRRPGAPSL 62
Query: 249 SP 250
SP
Sbjct: 63 SP 64
>gi|5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform 1
[Homo sapiens]
Length = 1045
Score = 35.8 bits (81), Expect = 0.046
Identities = 49/170 (28%), Positives = 62/170 (36%), Gaps = 24/170 (14%)
Query: 103 LRLETLVQKVVSPYLGTYGLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNT 162
L E L Q S L T+G +E P SC RR + V A P S
Sbjct: 381 LNSEVLEQSQQSTSL-TFG-EGAESPGGQSC-------RRGKEPKVSAGEP--GSHPSPA 429
Query: 163 PLLNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGP 222
P +P +A+GAA+ T V + T +PQ P Q TG+ S PH
Sbjct: 430 PRRSPAGNKQADGAASAPTEEEEEVVKDRTQQSKPQ-----PPQPSTGSLTGS--PHLSE 482
Query: 223 CPSRLYPTTQPPEQGLDP-----TRSSLPRSSPENLVDQILESVDSDSEG 267
P L P T+ + P SP L DQ D + EG
Sbjct: 483 LSVNSQGGVAPANVTLSPNLSPDTKQASPLISP-LLNDQACPRTDDEDEG 531
>gi|13430848 nuclear receptor subfamily 1, group D, member 1 [Homo
sapiens]
Length = 614
Score = 35.8 bits (81), Expect = 0.046
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 192 TSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPE 251
+ CP + P GP G P+P P PS L +Q P+Q L P RS P + E
Sbjct: 233 SQCPLETSPTQHPTPGPMG-----PSPPPAPVPSPLVGFSQFPQQ-LTPPRSPSPEPTVE 286
Query: 252 NLVDQI 257
+++ Q+
Sbjct: 287 DVISQV 292
>gi|46243671 G protein-coupled receptor 152 [Homo sapiens]
Length = 470
Score = 35.8 bits (81), Expect = 0.046
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
Query: 152 NPVVRSKSYNT--PLLNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQG-- 207
NP ++ +S T P LNP + +++ A ++ S+ + P+ P
Sbjct: 361 NPTLQPRSDPTAQPQLNPTAQPQSDPTAQPQLNLMAQPQSDSVAQPQADTNVQTPAPAAS 420
Query: 208 --PTGTFRSSPAPHSGPCPSRLY-PTTQPPEQGLDPTRSSLPRSSP 250
P+ +SP P S P P L P T P +G P+ S+ P ++P
Sbjct: 421 SVPSPCDEASPTPSSHPTPGALEDPATPPASEGESPS-STPPEAAP 465
>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
Length = 548
Score = 35.4 bits (80), Expect = 0.060
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 175 GAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPP 234
G+ G+ + R + P P G PP P+G P P SGP P QPP
Sbjct: 452 GSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSG---QPPPPPSGPLPPWQQQQQQPP 508
Query: 235 EQGLDPTRSSLPRSSP 250
P SS+ S+P
Sbjct: 509 PP--PPPSSSMASSTP 522
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 35.4 bits (80), Expect = 0.060
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 175 GAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPP 234
G+ G+ + R + P P G PP P+G P P SGP P QPP
Sbjct: 452 GSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSG---QPPPPPSGPLPPWQQQQQQPP 508
Query: 235 EQGLDPTRSSLPRSSP 250
P SS+ S+P
Sbjct: 509 PP--PPPSSSMASSTP 522
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 35.4 bits (80), Expect = 0.060
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 175 GAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPP 234
G+ G+ + R + P P G PP P+G P P SGP P QPP
Sbjct: 452 GSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSG---QPPPPPSGPLPPWQQQQQQPP 508
Query: 235 EQGLDPTRSSLPRSSP 250
P SS+ S+P
Sbjct: 509 PP--PPPSSSMASSTP 522
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 34.7 bits (78), Expect = 0.10
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 197 PQGFSDPPGQ--GPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 254
P+G PPG GP TF S+P SG S L P P P R P +P L
Sbjct: 1021 PRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLT 1080
Query: 255 DQI 257
+
Sbjct: 1081 QDL 1083
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 34.3 bits (77), Expect = 0.13
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 194 CPEPQGFSDPPGQGPTGTFRSSPAPHSG----PCPSRLYPTTQPPEQGLDPTRSSLPRSS 249
CP + PP T + SP PHS P P L P PP+ L P R +L
Sbjct: 942 CPADRSPFLPPPPPVTDCSQGSPLPHSPVFPPPPPEALIPFCSPPDWCLSPPRPALSPIL 1001
Query: 250 PENLV 254
P++ V
Sbjct: 1002 PDSPV 1006
>gi|20070193 nuclear receptor subfamily 5, group A, member 1 [Homo
sapiens]
Length = 461
Score = 34.3 bits (77), Expect = 0.13
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 12/69 (17%)
Query: 195 PEPQGFSDPPGQGPTGTFRSSPAPHS-----GPCPSRLYPT-------TQPPEQGLDPTR 242
PEP+G + P GP G F + P + GP LYP ++ PE P +
Sbjct: 147 PEPKGLAAGPPAGPLGDFGAPALPMAVPGAHGPLAGYLYPAFPGRAIKSEYPEPYASPPQ 206
Query: 243 SSLPRSSPE 251
LP PE
Sbjct: 207 PGLPYGYPE 215
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 34.3 bits (77), Expect = 0.13
Identities = 38/134 (28%), Positives = 51/134 (38%), Gaps = 11/134 (8%)
Query: 124 SSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEA----EGAAAG 179
SSE H LE R L++S S P R + PL PV A E +
Sbjct: 2109 SSEAAPHHQPPLENRGLQKSSSFSQGEAEPRGRHRRAGAPLEIPVARLGARRLQESPSLS 2168
Query: 180 GTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLD 239
S + S S P+P S P P+ T S P P++ + PE +
Sbjct: 2169 ALSEAQPSSPARPSAPKP---STPKSAEPSATTPSDAPQPPAPQPAQ----DKAPEPRPE 2221
Query: 240 PTRSSLPRSSPENL 253
P R+S P P+ L
Sbjct: 2222 PVRASKPAPPPQAL 2235
>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
1 [Homo sapiens]
Length = 828
Score = 33.9 bits (76), Expect = 0.17
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 164 LLNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSD----PPGQGPT-GTFRSSPAP 218
+L+P+ E + A T I+ + E S P+ G PP PT T SSP P
Sbjct: 370 VLSPLNLEEVQKKVAEQTFIKDDYL-ETISSPKDFGLGQRATPPPPPPPTYRTVVSSPGP 428
Query: 219 HSGPCPSRLYPTTQP--PEQGLDPTRSSLPRSSP 250
SGP P + P P L P RS+ P P
Sbjct: 429 GSGPGPGTTSGASSPARPATPLVPCRSTTPPPPP 462
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 33.5 bits (75), Expect = 0.23
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 195 PEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 254
P P G S PG P SP P G S + P+ PP G P + P P++ +
Sbjct: 12 PRP-GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAG-HPIPTQGPGGYPQDNM 69
Query: 255 DQILESVDSDSEGIFID---FGRGRGSGM 280
Q+ + ++S E D + + +G GM
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGM 98
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 33.5 bits (75), Expect = 0.23
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 195 PEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 254
P P G S PG P SP P G S + P+ PP G P + P P++ +
Sbjct: 12 PRP-GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAG-HPIPTQGPGGYPQDNM 69
Query: 255 DQILESVDSDSEGIFID---FGRGRGSGM 280
Q+ + ++S E D + + +G GM
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGM 98
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 33.5 bits (75), Expect = 0.23
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 195 PEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 254
P P G S PG P SP P G S + P+ PP G P + P P++ +
Sbjct: 12 PRP-GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAG-HPIPTQGPGGYPQDNM 69
Query: 255 DQILESVDSDSEGIFID---FGRGRGSGM 280
Q+ + ++S E D + + +G GM
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGM 98
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 33.5 bits (75), Expect = 0.23
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 195 PEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 254
P P G S PG P SP P G S + P+ PP G P + P P++ +
Sbjct: 12 PRP-GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAG-HPIPTQGPGGYPQDNM 69
Query: 255 DQILESVDSDSEGIFID---FGRGRGSGM 280
Q+ + ++S E D + + +G GM
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGM 98
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 33.5 bits (75), Expect = 0.23
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 195 PEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 254
P P G S PG P SP P G S + P+ PP G P + P P++ +
Sbjct: 12 PRP-GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAG-HPIPTQGPGGYPQDNM 69
Query: 255 DQILESVDSDSEGIFID---FGRGRGSGM 280
Q+ + ++S E D + + +G GM
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGM 98
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 33.5 bits (75), Expect = 0.23
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 195 PEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 254
P P G S PG P SP P G S + P+ PP G P + P P++ +
Sbjct: 12 PRP-GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAG-HPIPTQGPGGYPQDNM 69
Query: 255 DQILESVDSDSEGIFID---FGRGRGSGM 280
Q+ + ++S E D + + +G GM
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGM 98
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 33.5 bits (75), Expect = 0.23
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 195 PEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 254
P P G S PG P SP P G S + P+ PP G P + P P++ +
Sbjct: 12 PRP-GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAG-HPIPTQGPGGYPQDNM 69
Query: 255 DQILESVDSDSEGIFID---FGRGRGSGM 280
Q+ + ++S E D + + +G GM
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGM 98
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 33.5 bits (75), Expect = 0.23
Identities = 54/202 (26%), Positives = 75/202 (37%), Gaps = 39/202 (19%)
Query: 105 LETLVQKVVSPYLGTYGLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPL 164
LE + + P G GL +S + K+L R G + NP + + S ++P
Sbjct: 36 LENDLPDELIPNGGELGLLNSGNLVPDAASKHKQLSELLRGGSGSSINPGIGNVSASSP- 94
Query: 165 LNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSDPPG--------QGPT------- 209
VQ+ A S S+S M P QG S P GPT
Sbjct: 95 ---VQQGLGGQAQGQPNSANMASLSAMGKSPLSQGDSSAPSLPKQAASTSGPTPAASQAL 151
Query: 210 --------GTFRSSPAP-HSGP--CPSRLYPTTQPPEQGLDPTRSSLPRSSPENLVDQIL 258
G SSPA +GP C + + T P GL L +S +L++Q
Sbjct: 152 NPQAQKQVGLATSSPATSQTGPGICMNANFNQTHP---GL------LNSNSGHSLINQAS 202
Query: 259 ESVDSDSEGIFIDFGRGRGSGM 280
+ G GRGRG+GM
Sbjct: 203 QGQAQVMNGSLGAAGRGRGAGM 224
Score = 28.1 bits (61), Expect = 9.6
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%)
Query: 195 PEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSS 244
P PQ S PP P+ + P+PH + P T P GL T +S
Sbjct: 2314 PRPQ--SQPPHSSPSPRIQPQPSPH------HVSPQTGSPHPGLAVTMAS 2355
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,846,283
Number of Sequences: 37866
Number of extensions: 728257
Number of successful extensions: 4204
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 232
Number of HSP's that attempted gapping in prelim test: 3849
Number of HSP's gapped (non-prelim): 581
length of query: 293
length of database: 18,247,518
effective HSP length: 101
effective length of query: 192
effective length of database: 14,423,052
effective search space: 2769225984
effective search space used: 2769225984
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.