Guide to the Human Genome
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Name: CMKLR1 Sequence: fasta or formatted (373aa) NCBI GI: 215272317
Description:

chemokine-like receptor 1 isoform a

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt mRNA [373aa] chemokine-like receptor 1 isoform a
alt mRNA [373aa] chemokine-like receptor 1 isoform a
alt prot [371aa] chemokine-like receptor 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         20           2
 C cysteine            2.9         11           1
 D aspartate           3.5         13           1
 E glutamate           2.7         10           1
 F phenylalanine       7.2         27           2
 G glycine             3.8         14           1
 H histidine           3.2         12           2
 I isoleucine          7.2         27           3
 K lysine              3.8         14           2
 L leucine            11.8         44           2
 M methionine          4.8         18           1
 N asparagine          4.8         18           2
 P proline             4.0         15           1
 Q glutamine           1.1          4           1
 R arginine            4.0         15           1
 S serine              9.4         35           3
 T threonine           6.7         25           1
 V valine              8.6         32           3
 W tryptophan          1.6          6           1
 Y tyrosine            3.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chemokine-like receptor 1 isoform a 
CMKLR1                1.000   chemokine-like receptor 1 isoform a 
CMKLR1                1.000   chemokine-like receptor 1 isoform a 
CMKLR1                0.995   chemokine-like receptor 1 isoform b 
GPR1                  0.290   G protein-coupled receptor 1 
GPR1                  0.290   G protein-coupled receptor 1 
FPR3                  0.254   formyl peptide receptor-like 2 
GPR44                 0.248   G protein-coupled receptor 44 
FPR2                  0.245   formyl peptide receptor-like 1 
FPR2                  0.245   formyl peptide receptor-like 1 
FPR1                  0.244   formyl peptide receptor 1 
C5AR1                 0.235   complement component 5 receptor 1 
GPR32                 0.215   G protein-coupled receptor 32 
AGTR1                 0.207   angiotensin II receptor, type 1 
AGTR1                 0.207   angiotensin II receptor, type 1 
AGTR1                 0.207   angiotensin II receptor, type 1 
AGTR1                 0.207   angiotensin II receptor, type 1 
AGTR1                 0.207   angiotensin II receptor, type 1 
APLNR                 0.194   apelin receptor 
SSTR4                 0.192   somatostatin receptor 4 
SSTR2                 0.187   somatostatin receptor 2 
SSTR5                 0.179   somatostatin receptor 5 
SSTR1                 0.175   somatostatin receptor 1 
CCR7                  0.167   chemokine (C-C motif) receptor 7 precursor 
OPRM1                 0.164   opioid receptor, mu 1 isoform MOR-1H 
OPRM1                 0.164   opioid receptor, mu 1 isoform MOR-1 
OPRM1                 0.164   opioid receptor, mu 1 isoform MOR-1B5 
OPRM1                 0.164   opioid receptor, mu 1 isoform MOR-1B2 
OPRM1                 0.164   opioid receptor, mu 1 isoform MOR-1B3 
OPRM1                 0.164   opioid receptor, mu 1 isoform MOR-1B1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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