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Search of human proteins with 62988338
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62988338 vimentin-type IF-associated coiled-coil protein
[Homo sapiens]
(169 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62988338 vimentin-type IF-associated coiled-coil protein [Hom... 335 1e-92
gi|21735548 centrosomal protein 2 [Homo sapiens] 43 1e-04
gi|119120861 formin-like 3 isoform 2 [Homo sapiens] 42 3e-04
gi|119120874 formin-like 3 isoform 1 [Homo sapiens] 42 3e-04
gi|239745299 PREDICTED: hypothetical protein [Homo sapiens] 41 4e-04
gi|167555110 kinesin family member C1 [Homo sapiens] 38 0.004
gi|187607364 tuftelin 1 isoform 2 [Homo sapiens] 38 0.005
gi|9910596 tuftelin 1 isoform 1 [Homo sapiens] 38 0.005
gi|221219020 NYD-SP11 protein [Homo sapiens] 37 0.006
gi|34577114 cytomatrix protein p110 [Homo sapiens] 37 0.008
gi|169211642 PREDICTED: hypothetical protein [Homo sapiens] 37 0.011
gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo s... 37 0.011
gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens] 37 0.011
gi|222352143 TBC1 domain family, member 2 [Homo sapiens] 36 0.014
gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo s... 36 0.014
gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo s... 36 0.014
gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo s... 36 0.014
gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo sap... 36 0.014
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 36 0.014
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 36 0.014
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 36 0.014
gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 36 0.014
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 36 0.018
gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens] 35 0.024
gi|119943096 dopamine receptor interacting protein [Homo sapiens] 35 0.031
gi|27436948 lamin A/C isoform 3 [Homo sapiens] 35 0.040
gi|5031875 lamin A/C isoform 2 [Homo sapiens] 35 0.040
gi|27436946 lamin A/C isoform 1 precursor [Homo sapiens] 35 0.040
gi|4502483 Ras association (RalGDS/AF-6) domain family (N-termin... 35 0.040
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 35 0.040
>gi|62988338 vimentin-type IF-associated coiled-coil protein [Homo
sapiens]
Length = 169
Score = 335 bits (859), Expect = 1e-92
Identities = 169/169 (100%), Positives = 169/169 (100%)
Query: 1 MSAPPALQIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGR 60
MSAPPALQIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGR
Sbjct: 1 MSAPPALQIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGR 60
Query: 61 AKDREIATLQEQLMTSEATVHSLQATVHQRDELIRQLQPRAELLQDICRRRPPLAGLLDA 120
AKDREIATLQEQLMTSEATVHSLQATVHQRDELIRQLQPRAELLQDICRRRPPLAGLLDA
Sbjct: 61 AKDREIATLQEQLMTSEATVHSLQATVHQRDELIRQLQPRAELLQDICRRRPPLAGLLDA 120
Query: 121 LAEAERLGPLPASDPGHPPPGGPGPPLDNSTGEEADRDHLQPAVFGTTV 169
LAEAERLGPLPASDPGHPPPGGPGPPLDNSTGEEADRDHLQPAVFGTTV
Sbjct: 121 LAEAERLGPLPASDPGHPPPGGPGPPLDNSTGEEADRDHLQPAVFGTTV 169
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 43.1 bits (100), Expect = 1e-04
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 6 ALQIREANAHLAAVHRRA-----AELEARLDAAERTVHAQAERLALHDQQLRAALDELGR 60
ALQ AH A + AEL L+A+ T+ A + H +QL AL R
Sbjct: 1965 ALQEALGKAHAALQGKEQHLLEQAELSRSLEASTATLQASLDACQAHSRQLEEAL----R 2020
Query: 61 AKDREIATLQEQLMTSEATVHSLQATVHQRDELIRQLQPRAELLQDICRRR 111
++ EI Q+Q + + V LQ + QRDE +R Q R +LL+ +R
Sbjct: 2021 IQEGEI---QDQDLRYQEDVQQLQQALAQRDEELRHQQEREQLLEKSLAQR 2068
Score = 38.1 bits (87), Expect = 0.004
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 10 REANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIATL 69
+E +A + + + E EA A E + + E + +QQLRA+L A++ + A L
Sbjct: 1097 KELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASL----WAQEAKAAQL 1152
Query: 70 QEQLMTSEATVHSLQATVHQRDELIRQLQPRA------ELLQDICRRRPPLAGLLDALAE 123
Q +L ++E+ + +L A ++ Q Q + + L +C RP L+G D+
Sbjct: 1153 QLRLRSTESQLEALAAEQQPGNQAQAQAQLASLYSALQQALGSVCESRPELSGGGDSAPS 1212
Query: 124 AERLGP 129
L P
Sbjct: 1213 VWGLEP 1218
Score = 33.1 bits (74), Expect = 0.12
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 14/102 (13%)
Query: 11 EANAHLAAVHRRAAELEARLDAAERTVHAQAERL------ALHDQQLRAA-LDELGRAKD 63
E N HL A ++A E A L A R + + E + + H Q+ L++L +
Sbjct: 659 EKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAK 718
Query: 64 REIATLQEQLMTSEATVHS-------LQATVHQRDELIRQLQ 98
R+ L + EA V LQA R +L QLQ
Sbjct: 719 RQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQ 760
Score = 33.1 bits (74), Expect = 0.12
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 21 RRAAELEARLDAAERTVHAQAERLALHDQQLRAAL--DELGRAKDREIATLQEQLMTSEA 78
+R A LD ER+ QA+ +HD + + + EL + +D+E+ + +EQ+ +
Sbjct: 1586 QRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLAREL-QERDQEVKSQREQIEELQR 1644
Query: 79 TVHSLQATVHQRDELIRQLQPRAELLQD 106
L + +RD+ + + R ++L+D
Sbjct: 1645 QKEHLTQDLERRDQELMLQKERIQVLED 1672
Score = 30.4 bits (67), Expect = 0.76
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Query: 6 ALQIREANAHLAAVHRRAAE--LEARLDAAERTVHAQAERL----ALHDQQLRAALDELG 59
A Q R+A A A + + LE + A E+ V+ E+ + H Q+L AL+ L
Sbjct: 822 AEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLE 881
Query: 60 RAKDREIATLQEQLMTSEATVHSLQATVHQRDELIRQLQ-----PRAELLQDICRRRPPL 114
R K L+EQ EA + Q + + Q+Q R LL+ + + + L
Sbjct: 882 REKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKEL 941
Query: 115 AGLLDALAEAERL 127
A DA + ERL
Sbjct: 942 A---DASQQLERL 951
>gi|119120861 formin-like 3 isoform 2 [Homo sapiens]
Length = 976
Score = 42.0 bits (97), Expect = 3e-04
Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 22/130 (16%)
Query: 40 QAERLALHDQQLRAALDELGRAKDREIATLQEQLMTSEATVHSLQATV----HQRDELIR 95
+ E L H L L +L +A L++QL+ E + S++ T HQ L R
Sbjct: 346 KVEELEEHVSHLTEKLLDLENENMMRVAELEKQLLQREKELESIKETYENTSHQVHTLRR 405
Query: 96 QLQPRAELLQDICRRRPPLAGLLDALAEA-ERLGP------LPASD-----PGHPP---- 139
++ + E Q C P + GL +EA R+GP +P SD P PP
Sbjct: 406 LIKEKEEAFQRRCHLEPNVRGLESVDSEALARVGPAELSEGMPPSDLDLLAPAPPPEEVL 465
Query: 140 --PGGPGPPL 147
P P PPL
Sbjct: 466 PLPPPPAPPL 475
>gi|119120874 formin-like 3 isoform 1 [Homo sapiens]
Length = 1027
Score = 42.0 bits (97), Expect = 3e-04
Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 22/130 (16%)
Query: 40 QAERLALHDQQLRAALDELGRAKDREIATLQEQLMTSEATVHSLQATV----HQRDELIR 95
+ E L H L L +L +A L++QL+ E + S++ T HQ L R
Sbjct: 397 KVEELEEHVSHLTEKLLDLENENMMRVAELEKQLLQREKELESIKETYENTSHQVHTLRR 456
Query: 96 QLQPRAELLQDICRRRPPLAGLLDALAEA-ERLGP------LPASD-----PGHPP---- 139
++ + E Q C P + GL +EA R+GP +P SD P PP
Sbjct: 457 LIKEKEEAFQRRCHLEPNVRGLESVDSEALARVGPAELSEGMPPSDLDLLAPAPPPEEVL 516
Query: 140 --PGGPGPPL 147
P P PPL
Sbjct: 517 PLPPPPAPPL 526
>gi|239745299 PREDICTED: hypothetical protein [Homo sapiens]
Length = 523
Score = 41.2 bits (95), Expect = 4e-04
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 8 QIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIA 67
++RE L R E E RL E + Q ERL +++LR + L ++R +
Sbjct: 207 RLREQEERLREQEERLCEQEERLREQEERLREQEERLCEQEERLREHEERLCEQEER-LC 265
Query: 68 TLQEQLMTSEATVHSLQATVHQRDELIRQLQPR--------AELLQDICRRRPPLAGLLD 119
+E+L E +H + + +++E +R+ + R E + +C + L +
Sbjct: 266 EQEERLREQEERLHEQEERLCEQEERLREQEERLCEQEERLREQEERLCEQEERLREQEE 325
Query: 120 ALAEAERL 127
L E E+L
Sbjct: 326 RLCEQEKL 333
Score = 36.6 bits (83), Expect = 0.011
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 8 QIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIA 67
++RE L R E E RL E +H Q ERL +++LR + L ++R +
Sbjct: 249 RLREHEERLCEQEERLCEQEERLREQEERLHEQEERLCEQEERLREQEERLCEQEER-LR 307
Query: 68 TLQEQLMTSEATVHSLQATVHQRDELIRQ--LQPRAELLQDICRRRPPLAGLLD---ALA 122
+E+L E + + + ++++L Q L E L + RR+ LL+ L
Sbjct: 308 EQEERLCEQEERLREQEERLCEQEKLPGQERLLEEVEKLLEQERRQEEQERLLERERLLE 367
Query: 123 EAERL 127
E E L
Sbjct: 368 EVEEL 372
Score = 36.2 bits (82), Expect = 0.014
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Query: 8 QIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIA 67
++RE L R E E RL E + Q ERL +++L +E R + +
Sbjct: 200 RLREQEERLREQEERLREQEERLCEQEERLREQEERLREQEERL-CEQEERLREHEERLC 258
Query: 68 TLQEQLMTSEATVHSLQATVHQRDE-LIRQLQPRAELLQDICRRRPPLAGLLDALAEAE 125
+E+L E + + +H+++E L Q + E + +C + L + L E E
Sbjct: 259 EQEERLCEQEERLREQEERLHEQEERLCEQEERLREQEERLCEQEERLREQEERLCEQE 317
>gi|167555110 kinesin family member C1 [Homo sapiens]
Length = 673
Score = 38.1 bits (87), Expect = 0.004
Identities = 45/167 (26%), Positives = 61/167 (36%), Gaps = 41/167 (24%)
Query: 8 QIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIA 67
Q + L + ELE RL E V ++ ++ R + +L K+R +
Sbjct: 198 QAEQGQQELKNLRACVLELEERLSTQEGLVQELQKKQVELQEERRGLMSQL-EEKERRLQ 256
Query: 68 TLQEQLMTSEATVHSL-QATVHQ-----------------RDELIRQLQPRAELLQDICR 109
T + L +S+A V SL Q TV Q R L QLQ ++ CR
Sbjct: 257 TSEAALSSSQAEVASLRQETVAQAALLTEREERLHGLEMERRRLHNQLQELKGNIRVFCR 316
Query: 110 RRPPLAGLLDALAEAERLGPLPASDPGHPP-----PGGPGPPLDNST 151
RP L G +P PP P GPG P D T
Sbjct: 317 VRPVLPG-----------------EPTPPPGLLLFPSGPGGPSDPPT 346
>gi|187607364 tuftelin 1 isoform 2 [Homo sapiens]
Length = 365
Score = 37.7 bits (86), Expect = 0.005
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 24/140 (17%)
Query: 8 QIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIA 67
++R NA A +AA LE + +H LD++ +++ R++
Sbjct: 234 ELRSNNADCQAEREKAATLEKEVAGLREKIHH---------------LDDMLKSQQRKVR 278
Query: 68 TLQEQLMTSEATVHSLQATVHQRDELIRQLQPRAELLQDICRRRPPLAGLL-------DA 120
+ EQL S+A + S AT+ + E I L+ AE L+ R + + A
Sbjct: 279 QMIEQLQNSKAVIQSKDATIQELKEKIAYLE--AENLEMHDRMEHLIEKQISHGNFSTQA 336
Query: 121 LAEAERLGPLPASDPGHPPP 140
A+ E G + S P P P
Sbjct: 337 RAKTENPGSIRISKPPSPKP 356
>gi|9910596 tuftelin 1 isoform 1 [Homo sapiens]
Length = 390
Score = 37.7 bits (86), Expect = 0.005
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 24/140 (17%)
Query: 8 QIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIA 67
++R NA A +AA LE + +H LD++ +++ R++
Sbjct: 259 ELRSNNADCQAEREKAATLEKEVAGLREKIHH---------------LDDMLKSQQRKVR 303
Query: 68 TLQEQLMTSEATVHSLQATVHQRDELIRQLQPRAELLQDICRRRPPLAGLL-------DA 120
+ EQL S+A + S AT+ + E I L+ AE L+ R + + A
Sbjct: 304 QMIEQLQNSKAVIQSKDATIQELKEKIAYLE--AENLEMHDRMEHLIEKQISHGNFSTQA 361
Query: 121 LAEAERLGPLPASDPGHPPP 140
A+ E G + S P P P
Sbjct: 362 RAKTENPGSIRISKPPSPKP 381
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 37.4 bits (85), Expect = 0.006
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 8 QIREANAHL------AAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRA 61
Q+ E H+ A +HR+ A E + ER + + E+LA ++QL +L +A
Sbjct: 1560 QVTEEQRHIQEEHKWARIHRKRARAEKKRAQEERKLAQEEEKLAQEERQLAQEERKLAQA 1619
Query: 62 ------KDREIATLQEQLMTSEATVHSLQATVHQRDELIRQLQPR-AELLQDICRRRPPL 114
DRE+A + + E T+ + Q E + Q + + A+ + + R L
Sbjct: 1620 YVKITQDDREMAQAEGKFAQKEETLAQRGEKLSQEAEKLAQKRKKLAKKWEKVAREEEKL 1679
Query: 115 AGLLDALAEAERL 127
A LAE + +
Sbjct: 1680 AKKGGKLAEVKNI 1692
Score = 31.2 bits (69), Expect = 0.44
Identities = 22/113 (19%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 8 QIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDR--- 64
++ E LA + +E E +L E + + E+LA H +++ + LGR +++
Sbjct: 1748 KLAEEEEALAWQREKLSEEETKLAQEEELLIQEKEKLAQHKEKMPEEEERLGRKREQLIE 1807
Query: 65 ---EIATLQEQLMTSEATVHSLQATVHQRDELIRQLQPRAELLQDICRRRPPL 114
++A +E+ + S + + ++Q+ L ++ + A+ + + +R+ L
Sbjct: 1808 KKMKLAQKRERWINSMEELTKNKMILYQKKNLAQEKKNLAQEKEKLAQRKENL 1860
>gi|34577114 cytomatrix protein p110 [Homo sapiens]
Length = 957
Score = 37.0 bits (84), Expect = 0.008
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 21/126 (16%)
Query: 16 LAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELG-------------RAK 62
L A +RAA L+ +DA + + L +QL+ +E G K
Sbjct: 478 LTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVK 537
Query: 63 DREIATLQEQLMTSEATVHSLQATVHQRDELIRQLQPRAELLQ-DICRRRPPLAGLLDAL 121
+R+I LQ++ + +LQ + +D+ + L+ R + LQ D LA L +AL
Sbjct: 538 ERKINVLQKK-------IENLQEQLRDKDKQLTNLKDRVKSLQTDSSNTDTALATLEEAL 590
Query: 122 AEAERL 127
+E ER+
Sbjct: 591 SEKERI 596
Score = 31.2 bits (69), Expect = 0.44
Identities = 17/95 (17%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 8 QIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIA 67
Q+++ + +++ L+ ER ++ +++ +QLR +L KDR +
Sbjct: 512 QLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLRDKDKQLTNLKDR-VK 570
Query: 68 TLQEQLMTSEATVHSLQATVHQRDELIRQLQPRAE 102
+LQ ++ + +L+ + +++ +I +L+ + E
Sbjct: 571 SLQTDSSNTDTALATLEEALSEKERIIERLKEQRE 605
>gi|169211642 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 36.6 bits (83), Expect = 0.011
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 7 LQIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREI 66
L++REA +H R ELE++ A E +Q E A + +LR + + ++ +
Sbjct: 139 LEMREAQSHQQEAASR--ELESKCRALE----SQLEARAAANAELRREVAQ----REALV 188
Query: 67 ATLQEQLMTSEAT-VHSLQATVHQRDELIRQLQPRAELLQDICRRRPPLAGLLDALAEAE 125
+ L+ L T E + L+ H+ L +LQ E + + L A A A+
Sbjct: 189 SALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQAAA-AQ 247
Query: 126 RLGPLPASDPGHPPPGGP 143
R P PA+ PG P P P
Sbjct: 248 RPQPAPAASPGAPGPSRP 265
>gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo
sapiens]
Length = 378
Score = 36.6 bits (83), Expect = 0.011
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 7 LQIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREI 66
L++REA +H R ELE++ A E +Q E A + +LR + + ++ +
Sbjct: 139 LEMREAQSHQQEAASR--ELESKCRALE----SQLEARAAANAELRREVAQ----REALV 188
Query: 67 ATLQEQLMTSEAT-VHSLQATVHQRDELIRQLQPRAELLQDICRRRPPLAGLLDALAEAE 125
+ L+ L T E + L+ H+ L +LQ E + + L A A A+
Sbjct: 189 SALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQAAA-AQ 247
Query: 126 RLGPLPASDPGHPPPGGP 143
R P PA+ PG P P P
Sbjct: 248 RPQPAPAASPGAPGPSRP 265
>gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens]
Length = 625
Score = 36.6 bits (83), Expect = 0.011
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 26 LEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIATLQEQLMTSEATVHSLQA 85
+ AR + R +H +R +++LR + E +A+ RE+ TLQ+ + +A VHS+
Sbjct: 412 VRARYERELRELHEDKKR---QEEELRGQIRE-EKARTRELETLQQTVEELQAQVHSMDG 467
Query: 86 TVHQRDELIRQLQPRAELLQDI 107
+ +++ + + E LQD+
Sbjct: 468 AKGWFERRLKEAEGKEEELQDV 489
Score = 31.6 bits (70), Expect = 0.34
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 19/127 (14%)
Query: 15 HLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLR---AALDELGRAKDREIATLQE 71
H AA+ RA + + + +A+ Q E L + LR AAL+++ AK +E+ L+E
Sbjct: 253 HAAAL--RALQDQVSIQSAD--AQEQVEGLLAENNALRTSLAALEQIQTAKTQELNMLRE 308
Query: 72 QLMTSEATVHSLQA----TVHQRDELIRQLQPR-------AELLQDICRRRPPLA-GLLD 119
Q A + QA + Q+D+L QLQ E LQ+I + + L L +
Sbjct: 309 QTTGLAAELQQQQAEYEDLMGQKDDLNSQLQESLRANSRLLEQLQEIGQEKEQLTQELQE 368
Query: 120 ALAEAER 126
A AE+
Sbjct: 369 ARKSAEK 375
>gi|222352143 TBC1 domain family, member 2 [Homo sapiens]
Length = 917
Score = 36.2 bits (82), Expect = 0.014
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 18/135 (13%)
Query: 26 LEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIATLQEQLMTSEATVHSLQA 85
L L+AA++ A + LA + + R EL R K R+IA L ++ E SL
Sbjct: 332 LHKALEAAQQEKRASSAYLAAAEDKDRL---ELVRHKVRQIAELGRRVEALEQERESLAH 388
Query: 86 TVHQRDELIRQLQPRAELLQDICRRRPPLAGLLDALAEAERLGPLPASDPGHPPPGGPGP 145
T R++ +++LQ +LL D + + +L D HPP P
Sbjct: 389 TASLREQQVQELQQHVQLLMDKNHAKQQVIC---------KLSEKVTQDFTHPPDQSPLR 439
Query: 146 PLDNSTGEEADRDHL 160
P + A+RD L
Sbjct: 440 P------DAANRDFL 448
>gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo
sapiens]
Length = 600
Score = 36.2 bits (82), Expect = 0.014
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 101 AELLQDICRRRPPLAGLLDALAEAERLGPLPASDPGHPPPGGPGPPLDNSTGEEADRDHL 160
++L + R++PP+ + L E G P G PGGPG P+ G DR
Sbjct: 382 SKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGF 441
Query: 161 QP 162
P
Sbjct: 442 PP 443
>gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo
sapiens]
Length = 655
Score = 36.2 bits (82), Expect = 0.014
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 101 AELLQDICRRRPPLAGLLDALAEAERLGPLPASDPGHPPPGGPGPPLDNSTGEEADRDHL 160
++L + R++PP+ + L E G P G PGGPG P+ G DR
Sbjct: 437 SKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGF 496
Query: 161 QP 162
P
Sbjct: 497 PP 498
>gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo
sapiens]
Length = 661
Score = 36.2 bits (82), Expect = 0.014
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 101 AELLQDICRRRPPLAGLLDALAEAERLGPLPASDPGHPPPGGPGPPLDNSTGEEADRDHL 160
++L + R++PP+ + L E G P G PGGPG P+ G DR
Sbjct: 443 SKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGF 502
Query: 161 QP 162
P
Sbjct: 503 PP 504
>gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo
sapiens]
Length = 656
Score = 36.2 bits (82), Expect = 0.014
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 101 AELLQDICRRRPPLAGLLDALAEAERLGPLPASDPGHPPPGGPGPPLDNSTGEEADRDHL 160
++L + R++PP+ + L E G P G PGGPG P+ G DR
Sbjct: 438 SKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGF 497
Query: 161 QP 162
P
Sbjct: 498 PP 499
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 36.2 bits (82), Expect = 0.014
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 11/119 (9%)
Query: 8 QIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIA 67
++ + L + L L + E +H A+ L + + + AL RA + E A
Sbjct: 1313 ELENVSGALNEAESKTIRLSKELSSTEAQLH-DAQELLQEETRAKLALGSRVRAMEAEAA 1371
Query: 68 TLQEQLMTSEATVHSLQATVHQRDELIRQLQPRAELLQDICRRRPPLAGLLDALAEAER 126
L+EQL A R+ R+LQ L + RR+ AG L+A EA R
Sbjct: 1372 GLREQLEEEAAA----------RERAGRELQTAQAQLSEWRRRQEEEAGALEAGEEARR 1420
Score = 33.9 bits (76), Expect = 0.068
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 16 LAAVHRRAAELEARLDAA-------ERTVHAQAERLALHDQQLRAALDELGRAKDREIAT 68
LA +AAE E ++ + E T+ +RL +++ R L++L R D E +
Sbjct: 1033 LAEFSSQAAEEEEKVKSLNKLRLKYEATIADMEDRLR-KEEKGRQELEKLKRRLDGESSE 1091
Query: 69 LQEQLMTSEATVHSLQATVHQRDELIRQLQPRAE 102
LQEQ++ + L+A + +++E ++ RAE
Sbjct: 1092 LQEQMVEQQQRAEELRAQLGRKEEELQAALARAE 1125
Score = 28.1 bits (61), Expect = 3.8
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 56 DELGRAKDREIATLQEQLMTSEATVHSLQATVHQRDE----LIRQLQPRAELLQDICRRR 111
DE+ +A+ +E+ +QE S V LQ V Q +E L QL+ AEL + R
Sbjct: 876 DEVLQARAQELQKVQELQQQSAREVGELQGRVAQLEEERARLAEQLRAEAELCAEAEETR 935
Query: 112 PPLA 115
LA
Sbjct: 936 GRLA 939
Score = 27.3 bits (59), Expect = 6.4
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 17 AAVHRRAAELE-ARLDAAERTVHAQAERLALHDQQ-LRAALDELGRAKDREIATLQEQLM 74
AAV R E E A + ER A + AL ++Q R L+ RA E+ L
Sbjct: 1487 AAVLRAVEERERAEAEGREREARALSLTRALEEEQEAREELERQNRALRAELEALLSSKD 1546
Query: 75 TSEATVHSLQATVHQRDELIRQLQPRAELLQD 106
+VH L+ ++ L+ + L+D
Sbjct: 1547 DVGKSVHELERACRVAEQAANDLRAQVTELED 1578
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 36.2 bits (82), Expect = 0.014
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 11/119 (9%)
Query: 8 QIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIA 67
++ + L + L L + E +H A+ L + + + AL RA + E A
Sbjct: 1305 ELENVSGALNEAESKTIRLSKELSSTEAQLH-DAQELLQEETRAKLALGSRVRAMEAEAA 1363
Query: 68 TLQEQLMTSEATVHSLQATVHQRDELIRQLQPRAELLQDICRRRPPLAGLLDALAEAER 126
L+EQL A R+ R+LQ L + RR+ AG L+A EA R
Sbjct: 1364 GLREQLEEEAAA----------RERAGRELQTAQAQLSEWRRRQEEEAGALEAGEEARR 1412
Score = 33.9 bits (76), Expect = 0.068
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 16 LAAVHRRAAELEARLDAA-------ERTVHAQAERLALHDQQLRAALDELGRAKDREIAT 68
LA +AAE E ++ + E T+ +RL +++ R L++L R D E +
Sbjct: 1025 LAEFSSQAAEEEEKVKSLNKLRLKYEATIADMEDRLR-KEEKGRQELEKLKRRLDGESSE 1083
Query: 69 LQEQLMTSEATVHSLQATVHQRDELIRQLQPRAE 102
LQEQ++ + L+A + +++E ++ RAE
Sbjct: 1084 LQEQMVEQQQRAEELRAQLGRKEEELQAALARAE 1117
Score = 28.1 bits (61), Expect = 3.8
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 56 DELGRAKDREIATLQEQLMTSEATVHSLQATVHQRDE----LIRQLQPRAELLQDICRRR 111
DE+ +A+ +E+ +QE S V LQ V Q +E L QL+ AEL + R
Sbjct: 868 DEVLQARAQELQKVQELQQQSAREVGELQGRVAQLEEERARLAEQLRAEAELCAEAEETR 927
Query: 112 PPLA 115
LA
Sbjct: 928 GRLA 931
Score = 27.3 bits (59), Expect = 6.4
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 17 AAVHRRAAELE-ARLDAAERTVHAQAERLALHDQQ-LRAALDELGRAKDREIATLQEQLM 74
AAV R E E A + ER A + AL ++Q R L+ RA E+ L
Sbjct: 1479 AAVLRAVEERERAEAEGREREARALSLTRALEEEQEAREELERQNRALRAELEALLSSKD 1538
Query: 75 TSEATVHSLQATVHQRDELIRQLQPRAELLQD 106
+VH L+ ++ L+ + L+D
Sbjct: 1539 DVGKSVHELERACRVAEQAANDLRAQVTELED 1570
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 36.2 bits (82), Expect = 0.014
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 11/119 (9%)
Query: 8 QIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIA 67
++ + L + L L + E +H A+ L + + + AL RA + E A
Sbjct: 1346 ELENVSGALNEAESKTIRLSKELSSTEAQLH-DAQELLQEETRAKLALGSRVRAMEAEAA 1404
Query: 68 TLQEQLMTSEATVHSLQATVHQRDELIRQLQPRAELLQDICRRRPPLAGLLDALAEAER 126
L+EQL A R+ R+LQ L + RR+ AG L+A EA R
Sbjct: 1405 GLREQLEEEAAA----------RERAGRELQTAQAQLSEWRRRQEEEAGALEAGEEARR 1453
Score = 33.9 bits (76), Expect = 0.068
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 16 LAAVHRRAAELEARLDAA-------ERTVHAQAERLALHDQQLRAALDELGRAKDREIAT 68
LA +AAE E ++ + E T+ +RL +++ R L++L R D E +
Sbjct: 1066 LAEFSSQAAEEEEKVKSLNKLRLKYEATIADMEDRLR-KEEKGRQELEKLKRRLDGESSE 1124
Query: 69 LQEQLMTSEATVHSLQATVHQRDELIRQLQPRAE 102
LQEQ++ + L+A + +++E ++ RAE
Sbjct: 1125 LQEQMVEQQQRAEELRAQLGRKEEELQAALARAE 1158
Score = 28.1 bits (61), Expect = 3.8
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 56 DELGRAKDREIATLQEQLMTSEATVHSLQATVHQRDE----LIRQLQPRAELLQDICRRR 111
DE+ +A+ +E+ +QE S V LQ V Q +E L QL+ AEL + R
Sbjct: 909 DEVLQARAQELQKVQELQQQSAREVGELQGRVAQLEEERARLAEQLRAEAELCAEAEETR 968
Query: 112 PPLA 115
LA
Sbjct: 969 GRLA 972
Score = 27.3 bits (59), Expect = 6.4
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 17 AAVHRRAAELE-ARLDAAERTVHAQAERLALHDQQ-LRAALDELGRAKDREIATLQEQLM 74
AAV R E E A + ER A + AL ++Q R L+ RA E+ L
Sbjct: 1520 AAVLRAVEERERAEAEGREREARALSLTRALEEEQEAREELERQNRALRAELEALLSSKD 1579
Query: 75 TSEATVHSLQATVHQRDELIRQLQPRAELLQD 106
+VH L+ ++ L+ + L+D
Sbjct: 1580 DVGKSVHELERACRVAEQAANDLRAQVTELED 1611
>gi|21071077 dishevelled-associated activator of morphogenesis 1
[Homo sapiens]
Length = 1078
Score = 36.2 bits (82), Expect = 0.014
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Query: 40 QAERLALHDQQLRAALDELGRAKDREIATLQEQLMTSEATVHSLQATVHQRDELIRQLQP 99
QAE++ +L+ L++ R D + +E + T L+ + ++ +Q+
Sbjct: 451 QAEKMRKEHNELQQKLEKKERECDAKTQEKEEMMQTLNKMKEKLEKETTEHKQVKQQVAD 510
Query: 100 RAELLQDICRRRPPLAGLLDALAEAERLGPLPASDPGHPPPGGPGPPL 147
L ++ RR A + + GP P+S PG P P PPL
Sbjct: 511 LTAQLHELSRRAV-CASIPGGPSPGAPGGPFPSSVPGSLLPPPPPPPL 557
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin
(with transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 35.8 bits (81), Expect = 0.018
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 24 AELEARLDAAERTVHAQAERLALH-------DQQLRAALDELGRAKDREIATLQEQLMTS 76
AELE+R A E+ A+ E H Q+L++A D L + + EQ + S
Sbjct: 357 AELESRYSALEQKHKAEMEEKTSHILSLQKTGQELQSACDALKDQNSKLLQDKNEQAVQS 416
Query: 77 EATVHSLQATVHQRDELIRQLQPRAELLQ 105
T+ L+ + Q+ + I Q R L Q
Sbjct: 417 AQTIQQLEDQLQQKSKEISQFLNRLPLQQ 445
>gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens]
Length = 1257
Score = 35.4 bits (80), Expect = 0.024
Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 8 QIREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIA 67
++ + LAA+ R E+E + A + + E + + +R A+ + ++R I
Sbjct: 283 EMAQMKERLAALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEER-IT 341
Query: 68 TLQEQLMTSE---ATVHSL-----------QATVHQRDELIRQLQPRAEL----LQDICR 109
TL+++ ++++ ++H + +A + Q +E RQLQ R EL LQ R
Sbjct: 342 TLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMR 401
Query: 110 RRPPLAGLLDALAEAERLGPLPASDPGH 137
+ L + L A+R+ L ++ H
Sbjct: 402 KAETLPEVEAEL--AQRIAALTKAEERH 427
Score = 29.6 bits (65), Expect = 1.3
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 8 QIREANAHLAAVHRRAA---ELEARL-DAAERTVHAQAERLALHDQQLRAALDELGRAKD 63
Q+ E N L +R E RL D +R + ERL LH ++ AAL+E
Sbjct: 440 QLEEKNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEE------ 493
Query: 64 REIATLQEQLMTSEATVHSLQATVHQRDELIRQLQP-RAELLQ 105
+ +QE SE +L+ ++H ++ L +++ R+EL Q
Sbjct: 494 -KNVLIQE----SETFRKNLEESLHDKERLAEEIEKLRSELDQ 531
Score = 27.7 bits (60), Expect = 4.9
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 47 HDQQLRA-ALDELGRAKDREIATLQEQLMTSEATVHSLQATVHQRDELIRQLQPRAELLQ 105
H +QL LDE +DR + TL+E + LQ ++ RD L RQL + L Q
Sbjct: 30 HFEQLMVNMLDE----RDRLLDTLRETQESLSLAQQRLQDVIYDRDSLQRQL--NSALPQ 83
Query: 106 DICRRRPPLAG 116
DI LAG
Sbjct: 84 DIESLTGGLAG 94
>gi|119943096 dopamine receptor interacting protein [Homo sapiens]
Length = 702
Score = 35.0 bits (79), Expect = 0.031
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 129 PLPAS--DPGHPPPGGPGPPLDNSTGEEAD 156
P PA DP H PPGGPGPP D ++++
Sbjct: 65 PNPAHWLDPSHGPPGGPGPPRDAEDPDQSE 94
>gi|27436948 lamin A/C isoform 3 [Homo sapiens]
Length = 634
Score = 34.7 bits (78), Expect = 0.040
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 6 ALQIREANAHLA-AVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDR 64
A Q E N++L A H + R+D+ + ++LA + +LR D L R +D
Sbjct: 274 ARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARERD- 332
Query: 65 EIATLQEQLMTSEATVHSLQATVHQR-DELIRQLQPRAELLQDICRRRPPLAGLLDALAE 123
T + L E + ++A + Q+ DE L + L +I R LL+ E
Sbjct: 333 ---TSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRK----LLEGEEE 385
Query: 124 AERLGPLPAS 133
RL P P S
Sbjct: 386 RLRLSPSPTS 395
>gi|5031875 lamin A/C isoform 2 [Homo sapiens]
Length = 572
Score = 34.7 bits (78), Expect = 0.040
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 6 ALQIREANAHLA-AVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDR 64
A Q E N++L A H + R+D+ + ++LA + +LR D L R +D
Sbjct: 274 ARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARERD- 332
Query: 65 EIATLQEQLMTSEATVHSLQATVHQR-DELIRQLQPRAELLQDICRRRPPLAGLLDALAE 123
T + L E + ++A + Q+ DE L + L +I R LL+ E
Sbjct: 333 ---TSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRK----LLEGEEE 385
Query: 124 AERLGPLPAS 133
RL P P S
Sbjct: 386 RLRLSPSPTS 395
>gi|27436946 lamin A/C isoform 1 precursor [Homo sapiens]
Length = 664
Score = 34.7 bits (78), Expect = 0.040
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 6 ALQIREANAHLA-AVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDR 64
A Q E N++L A H + R+D+ + ++LA + +LR D L R +D
Sbjct: 274 ARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARERD- 332
Query: 65 EIATLQEQLMTSEATVHSLQATVHQR-DELIRQLQPRAELLQDICRRRPPLAGLLDALAE 123
T + L E + ++A + Q+ DE L + L +I R LL+ E
Sbjct: 333 ---TSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRK----LLEGEEE 385
Query: 124 AERLGPLPAS 133
RL P P S
Sbjct: 386 RLRLSPSPTS 395
>gi|4502483 Ras association (RalGDS/AF-6) domain family (N-terminal)
member 7 isoform 1 [Homo sapiens]
Length = 373
Score = 34.7 bits (78), Expect = 0.040
Identities = 47/145 (32%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 10 REANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIAT- 68
RE A L A+ AE ARL A + AQA L + +L+ A + G AT
Sbjct: 187 REGQARLQALSAATAEHAARLQALD----AQARAL---EAELQLAAEAPGPPSPMASATE 239
Query: 69 -LQEQLMTSE---ATVHSLQATVHQRDELI-RQLQPRAELLQDICR--RRPPLAGLLDAL 121
L + L E A V A V + E R LQ +A+ L+++ R R+ L +
Sbjct: 240 RLHQDLAVQERQSAEVQGSLALVSRALEAAERALQAQAQELEELNRELRQCNLQQFIQQT 299
Query: 122 AEAERLGPLPASDPGHPPPGGPGPP 146
A L P P D G P GP PP
Sbjct: 300 GAA--LPPPPRPDRGPPGTQGPLPP 322
Score = 27.7 bits (60), Expect = 4.9
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 3 APPALQIREANAHLAAVHRRAAELEARL-------DAAERTVHAQAERLALHDQQLR 52
+P A + LA R++AE++ L +AAER + AQA+ L +++LR
Sbjct: 232 SPMASATERLHQDLAVQERQSAEVQGSLALVSRALEAAERALQAQAQELEELNRELR 288
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 34.7 bits (78), Expect = 0.040
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 QIREANAHLAAVHRRAAELEARLDAAERTVH------AQAERLALHDQQLRAAL-DELGR 60
++ EA A + ++ E E +L + E + A +ER H +Q R L DE+
Sbjct: 1660 ELEEARASRDEIFAQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDELADEITN 1719
Query: 61 AKDREIATLQEQLMTSEATVHSLQATVHQRDELIRQLQPRAELLQDICRRRPPLAGLLDA 120
+ + A L E+ L+A + Q +E + + Q ELL D R+ L+A
Sbjct: 1720 SASGKSALLDEK--------RRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNA 1771
Query: 121 LAEAER 126
AER
Sbjct: 1772 ELAAER 1777
Score = 26.9 bits (58), Expect = 8.4
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 21 RRAAELEARLDAAERT---VHAQAERLALHDQQLRAALDELGRAKDREIATLQEQLMTSE 77
++ ELEA L+ + A +++ + + L A ++ +A+D I L++ +
Sbjct: 1596 KQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKLQAQMK 1655
Query: 78 ATVHSLQATVHQRDELIRQLQPRAELLQDICRRRPPLAGLLDALAEAER 126
L+ RDE+ Q + + L+ + + L + LA +ER
Sbjct: 1656 DYQRELEEARASRDEIFAQSKESEKKLKSL---EAEILQLQEELASSER 1701
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,909,093
Number of Sequences: 37866
Number of extensions: 447696
Number of successful extensions: 5661
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 359
Number of HSP's that attempted gapping in prelim test: 4619
Number of HSP's gapped (non-prelim): 1369
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.