VMAC 34337

Name: VMAC	Sequence: fasta or formatted (169aa)		NCBI GI: 62988338
Description: vimentin-type IF-associated coiled-coil protein		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 16.6 28 2 C cysteine 0.6 1 1 D aspartate 6.5 11 1 E glutamate 8.9 15 2 F phenylalanine 0.6 1 1 G glycine 5.3 9 2 H histidine 4.7 8 1 I isoleucine 2.4 4 1 K lysine 0.6 1 1 L leucine 14.2 24 2 M methionine 1.2 2 1 N asparagine 1.2 2 1 P proline 8.9 15 3 Q glutamine 7.1 12 2 R arginine 10.1 17 3 S serine 3.0 5 1 T threonine 4.7 8 2 V valine 3.6 6 1 W tryptophan 0.0 0 0 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vimentin-type IF-associated coiled-coil protein [Hom... CEP250 0.058 centrosomal protein 2 FMNL3 0.055 formin-like 3 isoform 2 FMNL3 0.055 formin-like 3 isoform 1 LOC100133220 0.052 PREDICTED: hypothetical protein KIFC1 0.042 kinesin family member C1 TUFT1 0.042 tuftelin 1 isoform 2 TUFT1 0.042 tuftelin 1 isoform 1 WDR87 0.039 NYD-SP11 protein ERC2 0.039 cytomatrix protein p110 LOC100128142 0.039 PREDICTED: hypothetical protein LOC100128142 0.039 PREDICTED: similar to RIKEN cDNA E130309D14 GRIPAP1 0.039 GRIP1 associated protein 1 isoform 2 TBC1D2 0.035 TBC1 domain family, member 2 EWSR1 0.035 Ewing sarcoma breakpoint region 1 isoform 4 EWSR1 0.035 Ewing sarcoma breakpoint region 1 isoform 3 EWSR1 0.035 Ewing sarcoma breakpoint region 1 isoform 1 EWSR1 0.035 Ewing sarcoma breakpoint region 1 isoform 2 MYH14 0.035 myosin, heavy chain 14 isoform 1 MYH14 0.035 myosin, heavy chain 14 isoform 2 MYH14 0.035 myosin, heavy chain 14 isoform 3 DAAM1 0.035 dishevelled-associated activator of morphogenesis 1 ... GOLGB1 0.035 golgi autoantigen, golgin subfamily b, macrogolgin ... PPFIA2 0.032 PTPRF interacting protein alpha 2 DNAJC14 0.032 dopamine receptor interacting protein LMNA 0.032 lamin A/C isoform 3 LMNA 0.032 lamin A/C isoform 2 LMNA 0.032 lamin A/C isoform 1 precursor RASSF7 0.032 Ras association (RalGDS/AF-6) domain family (N-termin... MYH10 0.032 myosin, heavy polypeptide 10, non-muscle Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.