Search of human proteins with 62909985

Search of human proteins with 62909985

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|62909985 hypothetical protein LOC140711 [Homo sapiens]
         (215 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|62909985 hypothetical protein LOC140711 [Homo sapiens]             442   e-124
gi|194306543 oxidation resistance 1 isoform 2 [Homo sapiens]          205   2e-53
gi|194306541 oxidation resistance 1 isoform 1 [Homo sapiens]          205   2e-53
gi|170932526 nuclear receptor coactivator 7 isoform 2 [Homo sapi...   191   3e-49
gi|170932524 nuclear receptor coactivator 7 isoform 1 [Homo sapi...   191   3e-49
gi|205360930 hypothetical protein LOC57707 [Homo sapiens]              82   3e-16
gi|89886453 TBC1 domain family, member 24 [Homo sapiens]               76   2e-14
gi|166197690 neuronal guanine nucleotide exchange factor isoform...    37   0.010
gi|166197688 neuronal guanine nucleotide exchange factor isoform...    37   0.010
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]                    34   0.11 
gi|110349786 Alstrom syndrome 1 [Homo sapiens]                         33   0.18 
gi|221139761 zinc finger protein 853 [Homo sapiens]                    32   0.31 
gi|239755402 PREDICTED: hypothetical protein [Homo sapiens]            32   0.41 
gi|239749910 PREDICTED: hypothetical protein XP_002347211 [Homo ...    32   0.41 
gi|239744211 PREDICTED: hypothetical protein XP_002343075 [Homo ...    32   0.41 
gi|56549696 E1A binding protein p400 [Homo sapiens]                    32   0.53 
gi|45827729 scribble isoform b [Homo sapiens]                          32   0.53 
gi|45827731 scribble isoform a [Homo sapiens]                          32   0.53 
gi|15812226 transcriptional regulating factor 1 [Homo sapiens]         32   0.53 
gi|153791630 bromodomain and WD repeat domain containing 3 [Homo...    32   0.53 
gi|239757810 PREDICTED: similar to protein phosphatase 1, regula...    31   0.70 
gi|4506803 stem cell growth factor precursor [Homo sapiens]            31   0.70 
gi|58761532 protein phosphatase 1, regulatory (inhibitor) subuni...    31   0.70 
gi|22749303 hypothetical protein LOC196477 [Homo sapiens]              31   0.70 
gi|239756047 PREDICTED: heparan sulfate 6-O-sulfotransferase 3 [...    31   0.91 
gi|33356174 pinin, desmosome associated protein [Homo sapiens]         31   0.91 
gi|24371268 nucleosome assembly protein 1-like 5 [Homo sapiens]        31   0.91 
gi|45580707 heparan sulfate 6-O-sulfotransferase 3 [Homo sapiens]      31   0.91 
gi|90903231 huntingtin [Homo sapiens]                                  30   1.2  
gi|50345881 cytoplasmic polyadenylation element binding protein ...    30   1.2  

>gi|62909985 hypothetical protein LOC140711 [Homo sapiens]
          Length = 215

 Score =  442 bits (1137), Expect = e-124
 Identities = 215/215 (100%), Positives = 215/215 (100%)

Query: 1   MRGLRWRYTRLPSQVEDTLSGEEGNEEEEEEEAAPDPAAAPEDPTVPQLTEASQVLSASE 60
           MRGLRWRYTRLPSQVEDTLSGEEGNEEEEEEEAAPDPAAAPEDPTVPQLTEASQVLSASE
Sbjct: 1   MRGLRWRYTRLPSQVEDTLSGEEGNEEEEEEEAAPDPAAAPEDPTVPQLTEASQVLSASE 60

Query: 61  IRQLSFHFPPRVTGHPWSLVFCTSRDGFSLQSLYRRMEGCSGPVLLVLRDQDGQIFGAFS 120
           IRQLSFHFPPRVTGHPWSLVFCTSRDGFSLQSLYRRMEGCSGPVLLVLRDQDGQIFGAFS
Sbjct: 61  IRQLSFHFPPRVTGHPWSLVFCTSRDGFSLQSLYRRMEGCSGPVLLVLRDQDGQIFGAFS 120

Query: 121 SSAIRLSKGFYGTGETFLFSFSPQLKVFKWTGSNSFFVKGDLDSLMMGSGSGRFGLWLDG 180
           SSAIRLSKGFYGTGETFLFSFSPQLKVFKWTGSNSFFVKGDLDSLMMGSGSGRFGLWLDG
Sbjct: 121 SSAIRLSKGFYGTGETFLFSFSPQLKVFKWTGSNSFFVKGDLDSLMMGSGSGRFGLWLDG 180

Query: 181 DLFRGGSSPCPTFNNEVLARQEQFCIQELEAWLLS 215
           DLFRGGSSPCPTFNNEVLARQEQFCIQELEAWLLS
Sbjct: 181 DLFRGGSSPCPTFNNEVLARQEQFCIQELEAWLLS 215


>gi|194306543 oxidation resistance 1 isoform 2 [Homo sapiens]
          Length = 839

 Score =  205 bits (522), Expect = 2e-53
 Identities = 91/187 (48%), Positives = 128/187 (68%)

Query: 26  EEEEEEEAAPDPAAAPEDPTVPQLTEASQVLSASEIRQLSFHFPPRVTGHPWSLVFCTSR 85
           E+   ++ A   A    +   P L++ S++L   +I +L+ H PPR  G+PW+LV+ T +
Sbjct: 650 EDINSKQVATVKADLESESFRPNLSDPSELLLPDQIEKLTKHLPPRTIGYPWTLVYGTGK 709

Query: 86  DGFSLQSLYRRMEGCSGPVLLVLRDQDGQIFGAFSSSAIRLSKGFYGTGETFLFSFSPQL 145
            G SL++LYR M G   PVL+V++D DGQ+FGA +S  +++S GFYGTGETF+F+F P+ 
Sbjct: 710 HGTSLKTLYRTMTGLDTPVLMVIKDSDGQVFGALASEPLKVSDGFYGTGETFVFTFCPEF 769

Query: 146 KVFKWTGSNSFFVKGDLDSLMMGSGSGRFGLWLDGDLFRGGSSPCPTFNNEVLARQEQFC 205
           +VFKWTG N FF+KGD+DSL  G G G F LWLDGDL+ G S  C TF N  L+++E F 
Sbjct: 770 EVFKWTGDNMFFIKGDMDSLAFGGGGGEFALWLDGDLYHGRSHSCKTFGNRTLSKKEDFF 829

Query: 206 IQELEAW 212
           IQ++E W
Sbjct: 830 IQDIEIW 836


>gi|194306541 oxidation resistance 1 isoform 1 [Homo sapiens]
          Length = 846

 Score =  205 bits (522), Expect = 2e-53
 Identities = 91/187 (48%), Positives = 128/187 (68%)

Query: 26  EEEEEEEAAPDPAAAPEDPTVPQLTEASQVLSASEIRQLSFHFPPRVTGHPWSLVFCTSR 85
           E+   ++ A   A    +   P L++ S++L   +I +L+ H PPR  G+PW+LV+ T +
Sbjct: 657 EDINSKQVATVKADLESESFRPNLSDPSELLLPDQIEKLTKHLPPRTIGYPWTLVYGTGK 716

Query: 86  DGFSLQSLYRRMEGCSGPVLLVLRDQDGQIFGAFSSSAIRLSKGFYGTGETFLFSFSPQL 145
            G SL++LYR M G   PVL+V++D DGQ+FGA +S  +++S GFYGTGETF+F+F P+ 
Sbjct: 717 HGTSLKTLYRTMTGLDTPVLMVIKDSDGQVFGALASEPLKVSDGFYGTGETFVFTFCPEF 776

Query: 146 KVFKWTGSNSFFVKGDLDSLMMGSGSGRFGLWLDGDLFRGGSSPCPTFNNEVLARQEQFC 205
           +VFKWTG N FF+KGD+DSL  G G G F LWLDGDL+ G S  C TF N  L+++E F 
Sbjct: 777 EVFKWTGDNMFFIKGDMDSLAFGGGGGEFALWLDGDLYHGRSHSCKTFGNRTLSKKEDFF 836

Query: 206 IQELEAW 212
           IQ++E W
Sbjct: 837 IQDIEIW 843


>gi|170932526 nuclear receptor coactivator 7 isoform 2 [Homo
           sapiens]
          Length = 931

 Score =  191 bits (486), Expect = 3e-49
 Identities = 84/171 (49%), Positives = 117/171 (68%)

Query: 42  EDPTVPQLTEASQVLSASEIRQLSFHFPPRVTGHPWSLVFCTSRDGFSLQSLYRRMEGCS 101
           ++  +P L   S +L    I QL+   P RV G+PW L + T   G SL++LYR+     
Sbjct: 758 DEEVLPVLRPHSALLENMHIEQLARRLPARVQGYPWRLAYSTLEHGTSLKTLYRKSASLD 817

Query: 102 GPVLLVLRDQDGQIFGAFSSSAIRLSKGFYGTGETFLFSFSPQLKVFKWTGSNSFFVKGD 161
            PVLLV++D D QIFGA+++   + S  +YGTGETFL++FSP  KVFKW+G NS+F+ GD
Sbjct: 818 SPVLLVIKDMDNQIFGAYATHPFKFSDHYYGTGETFLYTFSPHFKVFKWSGENSYFINGD 877

Query: 162 LDSLMMGSGSGRFGLWLDGDLFRGGSSPCPTFNNEVLARQEQFCIQELEAW 212
           + SL +G G GRFGLWLD DL+ G S+ C TFNN++L+++E F +Q+LE W
Sbjct: 878 ISSLELGGGGGRFGLWLDADLYHGRSNSCSTFNNDILSKKEDFIVQDLEVW 928


>gi|170932524 nuclear receptor coactivator 7 isoform 1 [Homo
           sapiens]
          Length = 942

 Score =  191 bits (486), Expect = 3e-49
 Identities = 84/171 (49%), Positives = 117/171 (68%)

Query: 42  EDPTVPQLTEASQVLSASEIRQLSFHFPPRVTGHPWSLVFCTSRDGFSLQSLYRRMEGCS 101
           ++  +P L   S +L    I QL+   P RV G+PW L + T   G SL++LYR+     
Sbjct: 769 DEEVLPVLRPHSALLENMHIEQLARRLPARVQGYPWRLAYSTLEHGTSLKTLYRKSASLD 828

Query: 102 GPVLLVLRDQDGQIFGAFSSSAIRLSKGFYGTGETFLFSFSPQLKVFKWTGSNSFFVKGD 161
            PVLLV++D D QIFGA+++   + S  +YGTGETFL++FSP  KVFKW+G NS+F+ GD
Sbjct: 829 SPVLLVIKDMDNQIFGAYATHPFKFSDHYYGTGETFLYTFSPHFKVFKWSGENSYFINGD 888

Query: 162 LDSLMMGSGSGRFGLWLDGDLFRGGSSPCPTFNNEVLARQEQFCIQELEAW 212
           + SL +G G GRFGLWLD DL+ G S+ C TFNN++L+++E F +Q+LE W
Sbjct: 889 ISSLELGGGGGRFGLWLDADLYHGRSNSCSTFNNDILSKKEDFIVQDLEVW 939


>gi|205360930 hypothetical protein LOC57707 [Homo sapiens]
          Length = 456

 Score = 82.4 bits (202), Expect = 3e-16
 Identities = 50/152 (32%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 70  PRVTGHPWSLVFCTSRDGFSLQSLYRRMEGCSGPVLLVLRDQDGQIFGAFSSSAIRLSKG 129
           PR   H W L+F +   G S   L   +    GP + VL D D  +FG F+S +  +   
Sbjct: 259 PREQRHRWCLLFSSELHGHSFSQLCGHITH-RGPCVAVLEDHDKHVFGGFASCSWEVKPQ 317

Query: 130 FYGTGETFLFSFSPQLKVFKWTGSNSFFV------KGDLDSLMMGSGSGRFGLWLDGDLF 183
           F G    FLFS  P + V+  TG N  ++      +   + L MG     FGLW+D D  
Sbjct: 318 FQGDNRCFLFSICPSMAVYTHTGYNDHYMYLNHGQQTIPNGLGMGGQHNYFGLWVDVDFG 377

Query: 184 RGGS---SPCPTFNNEVLARQEQFCIQELEAW 212
           +G S     C T+N+  L+ QE F   ++E W
Sbjct: 378 KGHSRAKPTCTTYNSPQLSAQENFQFDKMEVW 409


>gi|89886453 TBC1 domain family, member 24 [Homo sapiens]
          Length = 553

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 56/213 (26%)

Query: 53  SQVLSASEIRQLSFHFPPRVTGHPWSLVFCTSRDGFSLQSLYRRMEGCSGPVLLVLRDQD 112
           S+++S  E+R +    P R       L+F + + G+SL   Y + EG   P LL+++   
Sbjct: 336 SEIVSVREMRDIWSWVPERFALCQPLLLFSSLQHGYSLARFYFQCEGHE-PTLLLIKTTQ 394

Query: 113 GQIFGAFSSS------AIRLSKGFYGTGETFLFSFSPQLKVFKW---------------- 150
            ++ GA+ S+            GF+GTGE F+F   P+++ ++W                
Sbjct: 395 KEVCGAYLSTDWSERNKFGGKLGFFGTGECFVFRLQPEVQRYEWVVIKHPELTKPPPLMA 454

Query: 151 -------------------------------TGSNSFFVKGDLDSLMMGSGSGRFGLWLD 179
                                          + + S F+ G  D L++G G G+  L++D
Sbjct: 455 AEPTAPLSHSASSDPADRLSPFLAARHFNLPSKTESMFMAGGSDCLIVGGGGGQ-ALYID 513

Query: 180 GDLFRGGSSPCPTFNNEVLARQEQFCIQELEAW 212
           GDL RG +S C TFNN+ L   E F I  +EAW
Sbjct: 514 GDLNRGRTSHCDTFNNQPLC-SENFLIAAVEAW 545


>gi|166197690 neuronal guanine nucleotide exchange factor isoform 2
           [Homo sapiens]
          Length = 618

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 4/41 (9%)

Query: 13  SQVEDTLSG----EEGNEEEEEEEAAPDPAAAPEDPTVPQL 49
           +++ED  +G    E+  EEEEEEE   +PA+ PE  T+PQ+
Sbjct: 107 AEIEDNTNGSPASEDTPEEEEEEEEEEEPASPPERKTLPQI 147


>gi|166197688 neuronal guanine nucleotide exchange factor isoform 1
           [Homo sapiens]
          Length = 710

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 4/41 (9%)

Query: 13  SQVEDTLSG----EEGNEEEEEEEAAPDPAAAPEDPTVPQL 49
           +++ED  +G    E+  EEEEEEE   +PA+ PE  T+PQ+
Sbjct: 199 AEIEDNTNGSPASEDTPEEEEEEEEEEEPASPPERKTLPQI 239


>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
          Length = 1489

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query: 12   PSQVEDTLSGEEGNEEEEEEEAAPDPAAAPEDPTVPQLTEASQVLSASE 60
            P   E+    E+ +EEE+EE AAP  AA P  P   +      V+S+++
Sbjct: 1300 PGPAEEDGEDEDEDEEEDEEAAAPGAAAGPRGPGRARAAPVPVVVSSAD 1348


>gi|110349786 Alstrom syndrome 1 [Homo sapiens]
          Length = 4169

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 18/40 (45%), Positives = 23/40 (57%)

Query: 12 PSQVEDTLSGEEGNEEEEEEEAAPDPAAAPEDPTVPQLTE 51
          P ++E+    EE  EEEEEEEAA   AA  +D  V +  E
Sbjct: 9  PGELEEEEEEEEEEEEEEEEEAAAAAAANVDDVVVVEEVE 48


>gi|221139761 zinc finger protein 853 [Homo sapiens]
          Length = 659

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 17 DTLSGEEGNEEEEEEEAAPDPAAAPEDPTVPQLTEASQV 55
          DTLSG  G  E +EEE   +  ++P+ P V     AS++
Sbjct: 40 DTLSGGSGGSESQEEEEPQERNSSPQRPAVSAPVGASEI 78


>gi|239755402 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 321

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)

Query: 11 LPSQVEDT----LSGEEGNEEEEEEEAAPDPAAAPED 43
          +P QVED       GE  ++  ++ E AP P+A PED
Sbjct: 59 VPQQVEDVQRQPADGEHHHDHHQQAEGAPAPSAVPED 95


>gi|239749910 PREDICTED: hypothetical protein XP_002347211 [Homo
          sapiens]
          Length = 321

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)

Query: 11 LPSQVEDT----LSGEEGNEEEEEEEAAPDPAAAPED 43
          +P QVED       GE  ++  ++ E AP P+A PED
Sbjct: 59 VPQQVEDVQRQPADGEHHHDHHQQAEGAPAPSAVPED 95


>gi|239744211 PREDICTED: hypothetical protein XP_002343075 [Homo
          sapiens]
          Length = 321

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)

Query: 11 LPSQVEDT----LSGEEGNEEEEEEEAAPDPAAAPED 43
          +P QVED       GE  ++  ++ E AP P+A PED
Sbjct: 59 VPQQVEDVQRQPADGEHHHDHHQQAEGAPAPSAVPED 95


>gi|56549696 E1A binding protein p400 [Homo sapiens]
          Length = 3122

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 33/113 (29%), Positives = 46/113 (40%), Gaps = 12/113 (10%)

Query: 11   LPSQVEDTL-SGEEGNEEEEEEEAAPDPAAA-PEDPTVPQLTEASQVLSASEIRQLSFHF 68
            LPSQ +  L SGE     +      P    A PE P   Q   +   LS S++RQL+   
Sbjct: 1553 LPSQAQARLPSGEVVKIAQLASITGPQSRVAQPETPVTLQFQGSKFTLSHSQLRQLTAGQ 1612

Query: 69   PPRVTGHPWSLVFCTSRDGFSLQSLYRRMEGCSGPVLLVLRDQDGQIFGAFSS 121
            P ++ G    +V    +        Y R     GPV++    Q G + GA  S
Sbjct: 1613 PLQLQGSVLQIVSAPGQP-------YLR---APGPVVMQTVSQAGAVHGALGS 1655


>gi|45827729 scribble isoform b [Homo sapiens]
          Length = 1630

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 15/45 (33%), Positives = 26/45 (57%)

Query: 22  EEGNEEEEEEEAAPDPAAAPEDPTVPQLTEASQVLSASEIRQLSF 66
           EEG+ +EEEEE   +  A  E+ +  +  +   V+SA  ++ +SF
Sbjct: 665 EEGSPQEEEEEEEEENRAEEEEASTEEEDKEGAVVSAPSVKGVSF 709


>gi|45827731 scribble isoform a [Homo sapiens]
          Length = 1655

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 15/45 (33%), Positives = 26/45 (57%)

Query: 22  EEGNEEEEEEEAAPDPAAAPEDPTVPQLTEASQVLSASEIRQLSF 66
           EEG+ +EEEEE   +  A  E+ +  +  +   V+SA  ++ +SF
Sbjct: 665 EEGSPQEEEEEEEEENRAEEEEASTEEEDKEGAVVSAPSVKGVSF 709


>gi|15812226 transcriptional regulating factor 1 [Homo sapiens]
          Length = 1200

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 12/61 (19%)

Query: 1   MRGLRWRYTRLPSQVEDTLSGEEGNEEEEEEEAAPDP------------AAAPEDPTVPQ 48
           MR  R   TRL   ++D ++ EE  E EEEEE  P+               +PE P VP 
Sbjct: 935 MRLGRKHRTRLAEIIDDCVTSEEEEELEEEEEEDPEEDRKSTKEEESEVPKSPEPPPVPV 994

Query: 49  L 49
           L
Sbjct: 995 L 995


>gi|153791630 bromodomain and WD repeat domain containing 3 [Homo
           sapiens]
          Length = 1802

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 22  EEGNEEEEEEEAAPDPAAAPEDPTVPQLTEASQVLSASEIRQLSFHF-----PPRVTGHP 76
           E+ +   EE+E      A+ EDP V   +E+S   S+SE    +        PP+     
Sbjct: 818 EDSDSSSEEDETVGTSDASVEDPVVEWQSESSSSDSSSEYSDWTADAGINLQPPKRQTRQ 877

Query: 77  WSLVFCTSRDGFSLQSLYRRME 98
            +   C+S D  +L+SL  R +
Sbjct: 878 TTRKICSSSDEENLKSLEERQK 899


>gi|239757810 PREDICTED: similar to protein phosphatase 1,
           regulatory (inhibitor) subunit 3F [Homo sapiens]
          Length = 724

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 12/18 (66%), Positives = 16/18 (88%)

Query: 21  GEEGNEEEEEEEAAPDPA 38
           GE+G+E EEEEEA P+P+
Sbjct: 85  GEDGDEGEEEEEACPEPS 102


>gi|4506803 stem cell growth factor precursor [Homo sapiens]
          Length = 323

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 22  EEGNEEEEEEEAAPDPAAAPEDPTVPQ 48
           EE   EEEEEEA P P++ P     P+
Sbjct: 79  EEDQGEEEEEEATPTPSSGPSPSPTPE 105


>gi|58761532 protein phosphatase 1, regulatory (inhibitor) subunit
           3F [Homo sapiens]
          Length = 799

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 12/18 (66%), Positives = 16/18 (88%)

Query: 21  GEEGNEEEEEEEAAPDPA 38
           GE+G+E EEEEEA P+P+
Sbjct: 85  GEDGDEGEEEEEACPEPS 102


>gi|22749303 hypothetical protein LOC196477 [Homo sapiens]
          Length = 406

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 13  SQVEDTLSGEEG---NEEEEEEEAAPDPAAAPEDPTVPQLTEASQVLSASEIRQLSFHFP 69
           S+ E+ +  EE    +EEEEE E A       E+    +L E  +VL  +E R   FH P
Sbjct: 301 SEEEEEVEDEEEEVEDEEEEEVEEAEYVEEGEEELEEEELEEEEEVLEENEQRGEEFHLP 360


>gi|239756047 PREDICTED: heparan sulfate 6-O-sulfotransferase 3
           [Homo sapiens]
          Length = 471

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 16  EDTLSGEEGNEEEEEEEAAPDPAAAPEDPTVPQ 48
           ED   G+    EEEEEE  PDP  APE+ ++P+
Sbjct: 91  EDEEPGDPREGEEEEEEDEPDP-EAPENGSLPR 122


>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
          Length = 717

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 22  EEGNEEEEEEEAAPDPAAAPEDPTVPQLTEASQ 54
           E   +EE+E E  P+P A P+  + PQL   SQ
Sbjct: 457 ESEEKEEKESEPQPEPVAQPQPQSQPQLQLQSQ 489


>gi|24371268 nucleosome assembly protein 1-like 5 [Homo sapiens]
          Length = 182

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 16/39 (41%), Positives = 20/39 (51%)

Query: 1   MRGLRWRYTRLPSQVEDTLSGEEGNEEEEEEEAAPDPAA 39
           M G  W       + E+    EE  E+EEEEEAA + AA
Sbjct: 127 MEGCAWTLEGEEEEEEEYEDDEEEGEDEEEEEAAAEAAA 165


>gi|45580707 heparan sulfate 6-O-sulfotransferase 3 [Homo sapiens]
          Length = 471

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 16  EDTLSGEEGNEEEEEEEAAPDPAAAPEDPTVPQ 48
           ED   G+    EEEEEE  PDP  APE+ ++P+
Sbjct: 91  EDEEPGDPREGEEEEEEDEPDP-EAPENGSLPR 122


>gi|90903231 huntingtin [Homo sapiens]
          Length = 3144

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 19   LSGEEGNEEEEEEEAAPDPAAAPEDP 44
            L  EE +EEEEEE  AP P++ P  P
Sbjct: 2633 LREEEWDEEEEEEADAPAPSSPPTSP 2658


>gi|50345881 cytoplasmic polyadenylation element binding protein 3
          [Homo sapiens]
          Length = 698

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 4/53 (7%)

Query: 19 LSGEEGNEEEEEEEAAPDPAAAPEDPTVPQLTEASQVLSASEIRQLSFHFPPR 71
          LS E    EE     A  PAAAP  P  P   +    L    +  LSFH PP+
Sbjct: 40 LSSETPKPEENSAVPALSPAAAPPAPNGPDKMQMESPL----LPGLSFHQPPQ 88


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,471,399
Number of Sequences: 37866
Number of extensions: 458337
Number of successful extensions: 5457
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 4781
Number of HSP's gapped (non-prelim): 590
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.