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Search of human proteins with 62739163
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62739163 lethal giant larvae homolog 2 isoform b [Homo
sapiens]
(356 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62739163 lethal giant larvae homolog 2 isoform b [Homo sapiens] 728 0.0
gi|73427803 lethal giant larvae homolog 2 isoform c [Homo sapiens] 707 0.0
gi|62739161 lethal giant larvae homolog 2 isoform a [Homo sapiens] 707 0.0
gi|62912476 lethal giant larvae homolog 1 [Homo sapiens] 343 2e-94
gi|189217915 syntaxin binding protein 5 (tomosyn) isoform b [Hom... 190 1e-48
gi|189217897 syntaxin binding protein 5 (tomosyn) isoform a [Hom... 190 1e-48
gi|149363700 syntaxin binding protein 5-like [Homo sapiens] 170 2e-42
gi|16418439 WD repeat and FYVE domain containing 2 [Homo sapiens] 42 0.001
gi|94400919 WD repeat domain 90 [Homo sapiens] 37 0.027
gi|55743075 angio-associated, migratory cell protein [Homo sapiens] 36 0.060
gi|221219050 transducin-like enhancer protein 2 isoform 3 [Homo ... 35 0.079
gi|21361151 transducin-like enhancer protein 2 isoform 1 [Homo s... 35 0.079
gi|21541824 transducin-like enhancer protein 1 [Homo sapiens] 35 0.10
gi|53759148 retinoblastoma binding protein 5 [Homo sapiens] 35 0.10
gi|34915994 transducin-like enhancer protein 4 [Homo sapiens] 35 0.13
gi|157384986 transducin-like enhancer protein 3 isoform b [Homo ... 35 0.13
gi|157384984 transducin-like enhancer protein 3 isoform c [Homo ... 35 0.13
gi|157384982 transducin-like enhancer protein 3 isoform a [Homo ... 35 0.13
gi|188219762 denticleless homolog [Homo sapiens] 33 0.39
gi|38605733 nucleoporin 43kDa [Homo sapiens] 33 0.39
gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens] 33 0.51
gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens] 33 0.51
gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens] 33 0.51
gi|18482373 WD repeat and FYVE domain containing 1 [Homo sapiens] 33 0.51
gi|14150171 THO complex 3 [Homo sapiens] 33 0.51
gi|56243599 WD repeat domain 35 isoform 2 [Homo sapiens] 32 0.87
gi|55743161 WD repeat domain 35 isoform 1 [Homo sapiens] 32 0.87
gi|65787364 coronin, actin binding protein, 1B [Homo sapiens] 32 1.1
gi|14149734 coronin, actin binding protein, 1B [Homo sapiens] 32 1.1
gi|221219004 WD repeat domain 74 [Homo sapiens] 31 1.5
>gi|62739163 lethal giant larvae homolog 2 isoform b [Homo sapiens]
Length = 356
Score = 728 bits (1878), Expect = 0.0
Identities = 356/356 (100%), Positives = 356/356 (100%)
Query: 1 MRRFLRPGHDPVRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYG 60
MRRFLRPGHDPVRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYG
Sbjct: 1 MRRFLRPGHDPVRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYG 60
Query: 61 APGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLR 120
APGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLR
Sbjct: 61 APGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLR 120
Query: 121 GPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPE 180
GPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPE
Sbjct: 121 GPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPE 180
Query: 181 EARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQR 240
EARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQR
Sbjct: 181 EARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQR 240
Query: 241 DGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIF 300
DGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIF
Sbjct: 241 DGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIF 300
Query: 301 QGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAASRRASGVGAQG 356
QGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAASRRASGVGAQG
Sbjct: 301 QGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAASRRASGVGAQG 356
>gi|73427803 lethal giant larvae homolog 2 isoform c [Homo sapiens]
Length = 1020
Score = 707 bits (1826), Expect = 0.0
Identities = 345/346 (99%), Positives = 346/346 (100%)
Query: 1 MRRFLRPGHDPVRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYG 60
MRRFLRPGHDPVRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYG
Sbjct: 1 MRRFLRPGHDPVRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYG 60
Query: 61 APGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLR 120
APGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLR
Sbjct: 61 APGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLR 120
Query: 121 GPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPE 180
GPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPE
Sbjct: 121 GPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPE 180
Query: 181 EARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQR 240
EARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQR
Sbjct: 181 EARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQR 240
Query: 241 DGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIF 300
DGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIF
Sbjct: 241 DGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIF 300
Query: 301 QGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAAS 346
QGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAA+
Sbjct: 301 QGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAAT 346
>gi|62739161 lethal giant larvae homolog 2 isoform a [Homo sapiens]
Length = 1015
Score = 707 bits (1826), Expect = 0.0
Identities = 345/346 (99%), Positives = 346/346 (100%)
Query: 1 MRRFLRPGHDPVRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYG 60
MRRFLRPGHDPVRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYG
Sbjct: 1 MRRFLRPGHDPVRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYG 60
Query: 61 APGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLR 120
APGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLR
Sbjct: 61 APGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLR 120
Query: 121 GPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPE 180
GPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPE
Sbjct: 121 GPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPE 180
Query: 181 EARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQR 240
EARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQR
Sbjct: 181 EARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQR 240
Query: 241 DGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIF 300
DGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIF
Sbjct: 241 DGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIF 300
Query: 301 QGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAAS 346
QGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAA+
Sbjct: 301 QGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAAT 346
>gi|62912476 lethal giant larvae homolog 1 [Homo sapiens]
Length = 1064
Score = 343 bits (879), Expect = 2e-94
Identities = 178/347 (51%), Positives = 232/347 (66%), Gaps = 6/347 (1%)
Query: 3 RFLRPGHDPVRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAP 62
RF R G DP RE+LK++LF FNKTVEHGFP+QPSAL + P LRI+AIGTRSGA+K+YGAP
Sbjct: 5 RFRRQGADPQREKLKQELFAFNKTVEHGFPNQPSALAFDPELRIMAIGTRSGAVKIYGAP 64
Query: 63 GVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGP 122
GVEF GLH++ VTQ+H L GQ +L++LLDD+SLHLW + G + L+E SF L
Sbjct: 65 GVEFTGLHRDAATVTQMHFLTGQGRLLSLLDDSSLHLWEIVHHNGCAHLEEALSFQLPSR 124
Query: 123 PG----AAP-SATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQR 177
PG +AP S T++TVVL ++ ++ LGTE +VF + + LE +T++ VL+
Sbjct: 125 PGFDGASAPLSLTRVTVVLLVAAGDIAALGTEGSSVFFLDVTTLTLLEGQTLAPGEVLRS 184
Query: 178 LPEEARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIW 237
+P++ R + VE+LQ H RDP +ILIGYSRGL+VIW+ V + FL +QQLE++
Sbjct: 185 VPDDYRCGKALGPVESLQGHLRDPTKILIGYSRGLLVIWNQASQCVDHIFLGNQQLESLC 244
Query: 238 WQRDGRLLVSCHSDGSYCQWPVSSEA-QQPEPLRSLVPYGPFPCKAITRILWLTTRQGLP 296
W RD +VS HSDGSY W V + + +P + PYGPFPCKAI +ILW G
Sbjct: 245 WGRDSSTVVSSHSDGSYAVWSVDAGSFPTLQPTVATTPYGPFPCKAINKILWRNCESGGH 304
Query: 297 FTIFQGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADP 343
F IF GGMPRASYGDRHC+SV+ DFTSR+I F + P
Sbjct: 305 FIIFSGGMPRASYGDRHCVSVLRAETLVTLDFTSRIIDFFTVHSTRP 351
>gi|189217915 syntaxin binding protein 5 (tomosyn) isoform b [Homo
sapiens]
Length = 1151
Score = 190 bits (483), Expect = 1e-48
Identities = 111/338 (32%), Positives = 179/338 (52%), Gaps = 31/338 (9%)
Query: 12 VRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQ 71
++E L+ + FQ KTV HGFP+QPSAL + P +ILA+GT++GA++L+G PGVE H
Sbjct: 37 IQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVECYCQHD 96
Query: 72 ENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQ 131
AV Q+ L + LV+ L D++LHLW+L+ K A + F +
Sbjct: 97 SGAAVIQLQFLINEGALVSALADDTLHLWNLRQKRPA--ILHSLKFCRE----------R 144
Query: 132 ITVV-LPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEM 190
+T LP S + LY+GTE GN+ +V + +F T+S ++ E +
Sbjct: 145 VTFCHLPFQS-KWLYVGTERGNIHIVNVESF------TLSGYVIMWNKAIELSSKSHPGP 197
Query: 191 VEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHS 250
V + ++P D ++LIG+ G VV+WDL+ + Y + + + ++ W +G+ + HS
Sbjct: 198 VVHISDNPMDEGKLLIGFESGTVVLWDLKSKKADYRYTYDEAIHSVAWHHEGKQFICSHS 257
Query: 251 DGSYCQWPVSSEAQQPEPLRSLVPYG--------PFPCKAITRILWLTTRQGLPFTIFQG 302
DG+ W V S A +P++++ P+G P PCK I ++ + TTR G PF I G
Sbjct: 258 DGTLTIWNVRSPA---KPVQTITPHGKQLKDGKKPEPCKPILKVEFKTTRSGEPFIILSG 314
Query: 303 GMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTE 340
G+ + G R C++V+H + ++ F L E
Sbjct: 315 GLSYDTVGRRPCLTVMHGKSTAVLEMDYSIVDFLTLCE 352
>gi|189217897 syntaxin binding protein 5 (tomosyn) isoform a [Homo
sapiens]
Length = 1115
Score = 190 bits (483), Expect = 1e-48
Identities = 111/338 (32%), Positives = 179/338 (52%), Gaps = 31/338 (9%)
Query: 12 VRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQ 71
++E L+ + FQ KTV HGFP+QPSAL + P +ILA+GT++GA++L+G PGVE H
Sbjct: 37 IQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVECYCQHD 96
Query: 72 ENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQ 131
AV Q+ L + LV+ L D++LHLW+L+ K A + F +
Sbjct: 97 SGAAVIQLQFLINEGALVSALADDTLHLWNLRQKRPA--ILHSLKFCRE----------R 144
Query: 132 ITVV-LPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEM 190
+T LP S + LY+GTE GN+ +V + +F T+S ++ E +
Sbjct: 145 VTFCHLPFQS-KWLYVGTERGNIHIVNVESF------TLSGYVIMWNKAIELSSKSHPGP 197
Query: 191 VEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHS 250
V + ++P D ++LIG+ G VV+WDL+ + Y + + + ++ W +G+ + HS
Sbjct: 198 VVHISDNPMDEGKLLIGFESGTVVLWDLKSKKADYRYTYDEAIHSVAWHHEGKQFICSHS 257
Query: 251 DGSYCQWPVSSEAQQPEPLRSLVPYG--------PFPCKAITRILWLTTRQGLPFTIFQG 302
DG+ W V S A +P++++ P+G P PCK I ++ + TTR G PF I G
Sbjct: 258 DGTLTIWNVRSPA---KPVQTITPHGKQLKDGKKPEPCKPILKVEFKTTRSGEPFIILSG 314
Query: 303 GMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTE 340
G+ + G R C++V+H + ++ F L E
Sbjct: 315 GLSYDTVGRRPCLTVMHGKSTAVLEMDYSIVDFLTLCE 352
>gi|149363700 syntaxin binding protein 5-like [Homo sapiens]
Length = 1186
Score = 170 bits (430), Expect = 2e-42
Identities = 108/340 (31%), Positives = 168/340 (49%), Gaps = 31/340 (9%)
Query: 10 DPVRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGL 69
+ ++E L + FQ KTV HGFPHQP+AL + P +ILAIGTR+GAI++ G PGV+
Sbjct: 48 EEIQETLTSEYFQICKTVRHGFPHQPTALAFDPVQKILAIGTRTGAIRILGRPGVDCYCQ 107
Query: 70 HQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSA 129
H+ AV Q+ L + LV+ D++LHLW+L+ K A + F +
Sbjct: 108 HESGAAVLQLQFLINEGALVSASSDDTLHLWNLRQKRPA--ILHSLKF----------NR 155
Query: 130 TQITVV-LPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVF 188
+IT LP S + LY+GTE GN +V + +F +S ++ E +
Sbjct: 156 ERITYCHLPFQS-KWLYVGTERGNTHIVNIESF------ILSGYVIMWNKAIELSTKTHP 208
Query: 189 EMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSC 248
V L + PRD ++LIGY G VV WDL+ R + + +I W +G+ +
Sbjct: 209 GPVVHLSDSPRDEGKLLIGYENGTVVFWDLKSKRAELRVYYDEAIHSIDWHHEGKQFMCS 268
Query: 249 HSDGSYCQWPVSSEAQQPEPLRSLVPYGPF--------PCKAITRILWLTTRQGLPFTIF 300
HSDGS W + S ++ P ++ +P+G CK I ++ + T + PF IF
Sbjct: 269 HSDGSLTLWNLKSPSR---PFQTTIPHGKSQREGRKSESCKPILKVEYKTCKNSEPFIIF 325
Query: 301 QGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTE 340
GG+ R ++++H T + ++ F L E
Sbjct: 326 SGGLSYDKACRRPSLTIMHGKAITVLEMDHPIVEFLTLCE 365
>gi|16418439 WD repeat and FYVE domain containing 2 [Homo sapiens]
Length = 400
Score = 41.6 bits (96), Expect = 0.001
Identities = 69/272 (25%), Positives = 112/272 (41%), Gaps = 47/272 (17%)
Query: 12 VRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQ 71
VR LKRD Q+ +V H P S + ++P R L+IG +G I EF+ L +
Sbjct: 48 VRVWLKRDSGQYWPSVYHAMPSPCSCMSFNPETRRLSIGLDNGTIS-------EFI-LSE 99
Query: 72 ENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQE-------DESFTLRG--P 122
+ N +T + VT++ L+ L+++ S Q+ ES G
Sbjct: 100 DYNKMTPVKNYQAHQSRVTMI------LFVLELEWVLSTGQDKQFAWHCSESGQRLGGYR 153
Query: 123 PGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEA 182
A S Q V H +++G SG V +++L E+ T+ +
Sbjct: 154 TSAVASGLQFDVETRH-----VFIGDHSGQVTILKLEQ----ENCTLVT----------- 193
Query: 183 RHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLS--SQQLENIWWQR 240
R V AL P + G S V++WD+ G + L + +++ + + +
Sbjct: 194 TFRGHTGGVTALCWDPVQ-RVLFSGSSDHSVIMWDIGGRKGTAIELQGHNDRVQALSYAQ 252
Query: 241 DGRLLVSCHSDGSYCQWPVSSEAQQ-PEPLRS 271
R L+SC DG W + E Q+ PE L S
Sbjct: 253 HTRQLISCGGDGGIVVWNMDVERQETPEWLDS 284
>gi|94400919 WD repeat domain 90 [Homo sapiens]
Length = 1748
Score = 37.0 bits (84), Expect = 0.027
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 10/129 (7%)
Query: 31 FPHQPS--ALGYSPSLRILA-IGTRSG-AIKLYGAPGVEFMGLHQENNAVTQIHLLPGQC 86
FPH + AL +SP R+L +G G + L+G + + + V + P
Sbjct: 1203 FPHSTTVLALAFSPDDRLLVTLGDHDGRTLALWGTATYDLVSSTRLPEPVHGVAFNPWDA 1262
Query: 87 QLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYL 146
+T + ++ W L+ +G LQ R P A A ++T L + + LLY
Sbjct: 1263 GELTCVGQGTVTFWLLQQRGADISLQ-----VRREPVPEAVGAGELTS-LCYGAPPLLYC 1316
Query: 147 GTESGNVFV 155
GT SG V V
Sbjct: 1317 GTSSGQVCV 1325
>gi|55743075 angio-associated, migratory cell protein [Homo sapiens]
Length = 434
Score = 35.8 bits (81), Expect = 0.060
Identities = 45/219 (20%), Positives = 80/219 (36%), Gaps = 16/219 (7%)
Query: 40 YSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHL 99
+ P +L GT G ++ P + N T +LP + V +D ++ +
Sbjct: 182 WHPRAPVLLAGTADGNTWMWKVPNGDCKTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRI 241
Query: 100 WSLKVKGGASELQEDESFTLRGPPGAAPSATQITVVLPHS-SCELLYLGTESGNVFVVQL 158
W LK L+ E +GP + +++L S C+ + +G V V
Sbjct: 242 WDLKQGSPIHVLKGTEGH--QGPLTCVAANQDGSLILTGSVDCQAKLVSATTGKVVGVFR 299
Query: 159 PAFRALEDRTISSDAVLQRLPEEARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDL 218
P T++S L E + VE+L P +GY G + I+DL
Sbjct: 300 P-------ETVASQPSLGEGEESESN-----SVESLGFCSVMP-LAAVGYLDGTLAIYDL 346
Query: 219 QGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSDGSYCQW 257
+ + + + W+ ++ +C DG W
Sbjct: 347 ATQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLW 385
>gi|221219050 transducin-like enhancer protein 2 isoform 3 [Homo
sapiens]
Length = 621
Score = 35.4 bits (80), Expect = 0.079
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 19 DLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQ 78
DL + + +H F Q +LG+ P+ LA+G S +++ E LH + V
Sbjct: 495 DLREGRQLQQHDFSSQIFSLGHCPNQDWLAVGMESSNVEILHVRKPEKYQLHLHESCVLS 554
Query: 79 IHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDES 116
+ V+ DN L+ W + GAS Q ES
Sbjct: 555 LKFASCGRWFVSTGKDNLLNAW--RTPYGASIFQSKES 590
>gi|21361151 transducin-like enhancer protein 2 isoform 1 [Homo
sapiens]
Length = 743
Score = 35.4 bits (80), Expect = 0.079
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 19 DLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQ 78
DL + + +H F Q +LG+ P+ LA+G S +++ E LH + V
Sbjct: 617 DLREGRQLQQHDFSSQIFSLGHCPNQDWLAVGMESSNVEILHVRKPEKYQLHLHESCVLS 676
Query: 79 IHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDES 116
+ V+ DN L+ W + GAS Q ES
Sbjct: 677 LKFASCGRWFVSTGKDNLLNAW--RTPYGASIFQSKES 712
>gi|21541824 transducin-like enhancer protein 1 [Homo sapiens]
Length = 770
Score = 35.0 bits (79), Expect = 0.10
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 19 DLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQ 78
DL + + +H F Q +LGY P+ LA+G S +++ + LH + V
Sbjct: 644 DLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLS 703
Query: 79 IHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDES 116
+ V+ DN L+ W + GAS Q ES
Sbjct: 704 LKFAYCGKWFVSTGKDNLLNAW--RTPYGASIFQSKES 739
>gi|53759148 retinoblastoma binding protein 5 [Homo sapiens]
Length = 538
Score = 35.0 bits (79), Expect = 0.10
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 204 ILIGYSRGLVVIWDLQGSRVLYHFLSSQ--QLENIWWQRDGRLLVSCHSDGSYCQWPVSS 261
+ +G + G +VIWD +R + +S+ + ++ W RDG LVS +D QW V S
Sbjct: 39 LAVGCNDGRIVIWDFL-TRGIAKIISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLS 97
>gi|34915994 transducin-like enhancer protein 4 [Homo sapiens]
Length = 773
Score = 34.7 bits (78), Expect = 0.13
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 19 DLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQ 78
DL + + +H F Q +LGY P+ LA+G + +++ + LH + V
Sbjct: 647 DLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLS 706
Query: 79 IHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDES 116
+ V+ DN L+ W + GAS Q ES
Sbjct: 707 LKFAHCGKWFVSTGKDNLLNAW--RTPYGASIFQSKES 742
>gi|157384986 transducin-like enhancer protein 3 isoform b [Homo
sapiens]
Length = 769
Score = 34.7 bits (78), Expect = 0.13
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 19 DLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQ 78
DL + + +H F Q +LGY P+ LA+G S +++ + LH + V
Sbjct: 643 DLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLS 702
Query: 79 IHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDES 116
+ V+ DN L+ W + GAS Q ES
Sbjct: 703 LKFAYCGKWFVSTGKDNLLNAW--RTPYGASIFQSKES 738
>gi|157384984 transducin-like enhancer protein 3 isoform c [Homo
sapiens]
Length = 760
Score = 34.7 bits (78), Expect = 0.13
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 19 DLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQ 78
DL + + +H F Q +LGY P+ LA+G S +++ + LH + V
Sbjct: 634 DLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLS 693
Query: 79 IHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDES 116
+ V+ DN L+ W + GAS Q ES
Sbjct: 694 LKFAYCGKWFVSTGKDNLLNAW--RTPYGASIFQSKES 729
>gi|157384982 transducin-like enhancer protein 3 isoform a [Homo
sapiens]
Length = 772
Score = 34.7 bits (78), Expect = 0.13
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 19 DLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQ 78
DL + + +H F Q +LGY P+ LA+G S +++ + LH + V
Sbjct: 646 DLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLS 705
Query: 79 IHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDES 116
+ V+ DN L+ W + GAS Q ES
Sbjct: 706 LKFAYCGKWFVSTGKDNLLNAW--RTPYGASIFQSKES 741
>gi|188219762 denticleless homolog [Homo sapiens]
Length = 730
Score = 33.1 bits (74), Expect = 0.39
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 28 EHGFPHQPSALGYS--PSLR-ILAIGTRSGAIKLYGAPGVEFMGLHQEN-----NAVTQI 79
E G P P +S P++ +LA+ G ++LY F + NAV +
Sbjct: 45 ETGVPVPPFGCTFSSAPNMEHVLAVANEEGFVRLYNTESQSFRKKCFKEWMAHWNAVFDL 104
Query: 80 HLLPGQCQLVTLLDDNSLHLWSLK 103
+PG+ +LVT D + W +K
Sbjct: 105 AWVPGELKLVTAAGDQTAKFWDVK 128
>gi|38605733 nucleoporin 43kDa [Homo sapiens]
Length = 380
Score = 33.1 bits (74), Expect = 0.39
Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 191 VEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQ-----RDGRLL 245
+ + HP + + G G++ IWD++ + L + + E W+ + L
Sbjct: 220 LHCVDRHPNQQHVVATGGQDGMLSIWDVRQGTMPVSLLKAHEAE--MWEVHFHPSNPEHL 277
Query: 246 VSCHSDGSYCQWPVSSEAQQPEPL 269
+C DGS W S++ + L
Sbjct: 278 FTCSEDGSLWHWDASTDVPEKSSL 301
>gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens]
Length = 429
Score = 32.7 bits (73), Expect = 0.51
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 109 SELQEDESFTL-RGPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDR 167
S+L ED F RGPPG P ++V +P +S L ++ L A L D
Sbjct: 48 SKLNEDSDFIFKRGPPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDS 107
Query: 168 TISSDAVLQRLPEEARHRRV 187
++ S P+ HR V
Sbjct: 108 SMLSP------PQTTLHRNV 121
>gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens]
Length = 437
Score = 32.7 bits (73), Expect = 0.51
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 109 SELQEDESFTL-RGPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDR 167
S+L ED F RGPPG P ++V +P +S L ++ L A L D
Sbjct: 48 SKLNEDSDFIFKRGPPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDS 107
Query: 168 TISSDAVLQRLPEEARHRRV 187
++ S P+ HR V
Sbjct: 108 SMLSP------PQTTLHRNV 121
>gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens]
Length = 497
Score = 32.7 bits (73), Expect = 0.51
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 109 SELQEDESFTL-RGPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDR 167
S+L ED F RGPPG P ++V +P +S L ++ L A L D
Sbjct: 116 SKLNEDSDFIFKRGPPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDS 175
Query: 168 TISSDAVLQRLPEEARHRRV 187
++ S P+ HR V
Sbjct: 176 SMLSP------PQTTLHRNV 189
>gi|18482373 WD repeat and FYVE domain containing 1 [Homo sapiens]
Length = 410
Score = 32.7 bits (73), Expect = 0.51
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 200 DPNQILI--GYSRGLVVIWDLQG--SRVLYHFLSSQQLENIWWQRDGRLLVSCHSDGSYC 255
DP Q L+ G S +++WD+ G R L +++++ + + R LVSC SDG
Sbjct: 208 DPIQRLLFSGASDNSIIMWDIGGRKGRTLLLQGHHDKVQSLCYLQLTRQLVSCSSDGGIA 267
Query: 256 QWPVS-SEAQQPEPLRS 271
W + S + P+ L S
Sbjct: 268 VWNMDVSREEAPQWLES 284
>gi|14150171 THO complex 3 [Homo sapiens]
Length = 351
Score = 32.7 bits (73), Expect = 0.51
Identities = 18/75 (24%), Positives = 36/75 (48%)
Query: 177 RLPEEARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENI 236
RL +E +R + V+ L HP +P+ + + IWD++ ++ + + + NI
Sbjct: 88 RLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINI 147
Query: 237 WWQRDGRLLVSCHSD 251
W DG+ + + D
Sbjct: 148 CWSPDGQTIAVGNKD 162
>gi|56243599 WD repeat domain 35 isoform 2 [Homo sapiens]
Length = 1170
Score = 32.0 bits (71), Expect = 0.87
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 200 DPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSDG 252
D +I I Y G V++ + G+R+ L QL ++ W D ++L+ ++G
Sbjct: 126 DGQKICIVYEDGAVIVGSVDGNRIWGKDLKGIQLSHVTWSADSKVLLFGMANG 178
>gi|55743161 WD repeat domain 35 isoform 1 [Homo sapiens]
Length = 1181
Score = 32.0 bits (71), Expect = 0.87
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 200 DPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSDG 252
D +I I Y G V++ + G+R+ L QL ++ W D ++L+ ++G
Sbjct: 126 DGQKICIVYEDGAVIVGSVDGNRIWGKDLKGIQLSHVTWSADSKVLLFGMANG 178
>gi|65787364 coronin, actin binding protein, 1B [Homo sapiens]
Length = 489
Score = 31.6 bits (70), Expect = 1.1
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Query: 137 PHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMVEALQE 196
PH+ E++ G+E V V Q+P + ++S + E +RV +
Sbjct: 92 PHND-EVIASGSEDCTVMVWQIP------ENGLTSPLTEPVVVLEGHTKRV----GIIAW 140
Query: 197 HPRDPNQILIGYSRGLVVIWDLQGSRVLYHF--LSSQQLENIWWQRDGRLLVSCHSDGS 253
HP N +L +V+IW++ + LY L + N+ W +G L S D S
Sbjct: 141 HPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNVSWNHNGSLFCSACKDKS 199
>gi|14149734 coronin, actin binding protein, 1B [Homo sapiens]
Length = 489
Score = 31.6 bits (70), Expect = 1.1
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Query: 137 PHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMVEALQE 196
PH+ E++ G+E V V Q+P + ++S + E +RV +
Sbjct: 92 PHND-EVIASGSEDCTVMVWQIP------ENGLTSPLTEPVVVLEGHTKRV----GIIAW 140
Query: 197 HPRDPNQILIGYSRGLVVIWDLQGSRVLYHF--LSSQQLENIWWQRDGRLLVSCHSDGS 253
HP N +L +V+IW++ + LY L + N+ W +G L S D S
Sbjct: 141 HPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNVSWNHNGSLFCSACKDKS 199
>gi|221219004 WD repeat domain 74 [Homo sapiens]
Length = 385
Score = 31.2 bits (69), Expect = 1.5
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 26/133 (19%)
Query: 165 EDRTISSDAVLQRLPEEARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVL 224
+D+ SSD +L+ RV V +++ P P+ + G + IWDLQGS
Sbjct: 115 KDKDTSSDPLLEL--------RVGPGVCRMRQDPAHPHVVATGGKENALKIWDLQGSE-- 164
Query: 225 YHFLSSQQLENIW-------WQRD------GRLLVSCHSDGSYCQWPVSSEAQQPEPLRS 271
++ + N W W +D + LV+C Y Q V A
Sbjct: 165 EPVFRAKNVRNDWLDLRVPIWDQDIQFLPGSQKLVTC---TGYHQVRVYDPASPQRRPVL 221
Query: 272 LVPYGPFPCKAIT 284
YG +P A+T
Sbjct: 222 ETTYGEYPLTAMT 234
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,197,720
Number of Sequences: 37866
Number of extensions: 729917
Number of successful extensions: 1828
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 1769
Number of HSP's gapped (non-prelim): 119
length of query: 356
length of database: 18,247,518
effective HSP length: 103
effective length of query: 253
effective length of database: 14,347,320
effective search space: 3629871960
effective search space used: 3629871960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.