Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 62526024
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62526024 cutA divalent cation tolerance homolog isoform 2
[Homo sapiens]
(156 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62526024 cutA divalent cation tolerance homolog isoform 2 [Ho... 305 8e-84
gi|7706244 cutA divalent cation tolerance homolog isoform 2 [Hom... 305 8e-84
gi|62526026 cutA divalent cation tolerance homolog isoform 3 [Ho... 305 8e-84
gi|62198241 cutA divalent cation tolerance homolog isoform 1 [Ho... 305 8e-84
gi|62526022 cutA divalent cation tolerance homolog isoform 2 [Ho... 305 8e-84
gi|47419911 transcriptional intermediary factor 1 alpha isoform ... 30 0.64
gi|47419909 transcriptional intermediary factor 1 alpha isoform ... 30 0.64
gi|239755930 PREDICTED: hypothetical protein XP_002344747 [Homo ... 29 1.8
gi|239750450 PREDICTED: hypothetical protein [Homo sapiens] 29 1.8
gi|239744752 PREDICTED: hypothetical protein XP_002343247 [Homo ... 29 1.8
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 29 1.8
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 29 1.8
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 29 1.8
gi|113722133 senataxin [Homo sapiens] 28 2.4
gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens] 28 2.4
gi|46852172 kinesin family member 13B [Homo sapiens] 28 3.2
gi|225543215 antigen identified by monoclonal antibody Ki-67 iso... 28 4.1
gi|103472005 antigen identified by monoclonal antibody Ki-67 iso... 28 4.1
gi|223941808 N-glycanase 1 isoform 4 [Homo sapiens] 28 4.1
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 28 4.1
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 28 4.1
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 28 4.1
gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens] 28 4.1
gi|5453810 netrin 3 [Homo sapiens] 28 4.1
gi|4503129 catenin, alpha-like 1 [Homo sapiens] 28 4.1
gi|187608767 E74-like factor 4 [Homo sapiens] 27 5.4
gi|4503555 E74-like factor 4 [Homo sapiens] 27 5.4
gi|19923597 Sin3A-associated protein, 130kDa isoform b [Homo sap... 27 5.4
gi|225579127 Sin3A-associated protein, 130kDa isoform a [Homo sa... 27 5.4
gi|7662208 GTPase regulator associated with the focal adhesion k... 27 5.4
>gi|62526024 cutA divalent cation tolerance homolog isoform 2 [Homo
sapiens]
Length = 156
Score = 305 bits (782), Expect = 8e-84
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60
MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE
Sbjct: 1 MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60
Query: 61 IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120
IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY
Sbjct: 61 IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120
Query: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156
EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP
Sbjct: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156
>gi|7706244 cutA divalent cation tolerance homolog isoform 2 [Homo
sapiens]
Length = 156
Score = 305 bits (782), Expect = 8e-84
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60
MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE
Sbjct: 1 MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60
Query: 61 IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120
IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY
Sbjct: 61 IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120
Query: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156
EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP
Sbjct: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156
>gi|62526026 cutA divalent cation tolerance homolog isoform 3 [Homo
sapiens]
Length = 179
Score = 305 bits (782), Expect = 8e-84
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60
MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE
Sbjct: 24 MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 83
Query: 61 IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120
IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY
Sbjct: 84 IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 143
Query: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156
EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP
Sbjct: 144 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 179
>gi|62198241 cutA divalent cation tolerance homolog isoform 1 [Homo
sapiens]
Length = 198
Score = 305 bits (782), Expect = 8e-84
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60
MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE
Sbjct: 43 MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 102
Query: 61 IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120
IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY
Sbjct: 103 IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 162
Query: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156
EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP
Sbjct: 163 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 198
>gi|62526022 cutA divalent cation tolerance homolog isoform 2 [Homo
sapiens]
Length = 156
Score = 305 bits (782), Expect = 8e-84
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60
MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE
Sbjct: 1 MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60
Query: 61 IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120
IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY
Sbjct: 61 IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120
Query: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156
EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP
Sbjct: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156
>gi|47419911 transcriptional intermediary factor 1 alpha isoform a
[Homo sapiens]
Length = 1050
Score = 30.4 bits (67), Expect = 0.64
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 5 LPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
LP R L+LP +L A +PP P+P S SG P + + CP
Sbjct: 82 LPAPQRYLMLPAPMLGSAE-TPPPVPAPGSPV-SGSSPFATQVGVIRCP 128
>gi|47419909 transcriptional intermediary factor 1 alpha isoform b
[Homo sapiens]
Length = 1016
Score = 30.4 bits (67), Expect = 0.64
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 5 LPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
LP R L+LP +L A +PP P+P S SG P + + CP
Sbjct: 82 LPAPQRYLMLPAPMLGSAE-TPPPVPAPGSPV-SGSSPFATQVGVIRCP 128
>gi|239755930 PREDICTED: hypothetical protein XP_002344747 [Homo
sapiens]
Length = 64
Score = 28.9 bits (63), Expect = 1.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 18 LLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAK 59
L TM+S P PSP S ++PG +A + P +A+
Sbjct: 12 LYTMSSEVLPQPPSPTITIFSSFLPGPGAAVWARAPGASIAR 53
>gi|239750450 PREDICTED: hypothetical protein [Homo sapiens]
Length = 64
Score = 28.9 bits (63), Expect = 1.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 18 LLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAK 59
L TM+S P PSP S ++PG +A + P +A+
Sbjct: 12 LYTMSSEVLPQPPSPTITIFSSFLPGPGAAVWARAPGASIAR 53
>gi|239744752 PREDICTED: hypothetical protein XP_002343247 [Homo
sapiens]
Length = 64
Score = 28.9 bits (63), Expect = 1.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 18 LLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAK 59
L TM+S P PSP S ++PG +A + P +A+
Sbjct: 12 LYTMSSEVLPQPPSPTITIFSSFLPGPGAAVWARAPGASIAR 53
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 28.9 bits (63), Expect = 1.8
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 1 MPALL----PVASRLLLLPRVLLT-MASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
+PA L P+A+RL + R +L+ +AS P+PA G P AAF P
Sbjct: 1882 LPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAYPPGPYATPPGYGAAFSAAP 1939
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 28.9 bits (63), Expect = 1.8
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 1 MPALL----PVASRLLLLPRVLLT-MASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
+PA L P+A+RL + R +L+ +AS P+PA G P AAF P
Sbjct: 1848 LPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAYPPGPYATPPGYGAAFSAAP 1905
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 28.9 bits (63), Expect = 1.8
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 1 MPALL----PVASRLLLLPRVLLT-MASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
+PA L P+A+RL + R +L+ +AS P+PA G P AAF P
Sbjct: 1941 LPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAYPPGPYATPPGYGAAFSAAP 1998
>gi|113722133 senataxin [Homo sapiens]
Length = 2677
Score = 28.5 bits (62), Expect = 2.4
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 4 LLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIAR 63
L PV R L P + GS P P+S SG+ SV+A+ P++ +KEI
Sbjct: 2465 LKPVLQRSLTHPPTIAP--EGSRPQGGLPSSKLDSGFAKTSVAASLYHTPSD--SKEITL 2520
Query: 64 AVVEK 68
V K
Sbjct: 2521 TVTSK 2525
>gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens]
Length = 882
Score = 28.5 bits (62), Expect = 2.4
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 10/80 (12%)
Query: 20 TMASGSPPTQPSPASDS------GSGYVPGSV--SAAFVTCPNEKVAKEIARAVVEKRLA 71
T GSPP +P P + G G GS S F++ A + +
Sbjct: 129 TSPGGSPPARPIPGQSAAPTLAGGGGGAAGSTPGSPVFLSAAAGSTAGSLRELATSRTAP 188
Query: 72 ACVN--LIPQITSIYEWKGK 89
A N L+P ++Y ++GK
Sbjct: 189 AAKNPCLLPYGKALYSYEGK 208
>gi|46852172 kinesin family member 13B [Homo sapiens]
Length = 1826
Score = 28.1 bits (61), Expect = 3.2
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 15 PRVLLTMASGSPPTQ---PSPASDSGSGYVPGSVSAA 48
P + +T + +P Q PSP S++ SGY SVS A
Sbjct: 1540 PVIAVTAVTPAPEAQDGPPSPLSEASSGYFSHSVSTA 1576
>gi|225543215 antigen identified by monoclonal antibody Ki-67
isoform 2 [Homo sapiens]
Length = 2896
Score = 27.7 bits (60), Expect = 4.1
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 51 TCPNEKVAKEIARAVVEKRLAACVNLIPQI-TSIYEWKGKIEEDSEVLMMIKT 102
T ++ + I +A VE L AC NL+P +++ K + E+ ++++ + T
Sbjct: 903 TSTKQRPKRSIRKADVEGELLACRNLMPSAGKAMHTPKPSVGEEKDIIIFVGT 955
>gi|103472005 antigen identified by monoclonal antibody Ki-67 isoform
1 [Homo sapiens]
Length = 3256
Score = 27.7 bits (60), Expect = 4.1
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 51 TCPNEKVAKEIARAVVEKRLAACVNLIPQI-TSIYEWKGKIEEDSEVLMMIKT 102
T ++ + I +A VE L AC NL+P +++ K + E+ ++++ + T
Sbjct: 1263 TSTKQRPKRSIRKADVEGELLACRNLMPSAGKAMHTPKPSVGEEKDIIIFVGT 1315
>gi|223941808 N-glycanase 1 isoform 4 [Homo sapiens]
Length = 558
Score = 27.7 bits (60), Expect = 4.1
Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 17/124 (13%)
Query: 13 LLPRVLLTMASGSPPTQPSPASDSG--SGYVPGSVSAA----------FVTCPNEKVAKE 60
LL R+++ + P P P G SG V V+ F+ C NEK++K+
Sbjct: 433 LLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETLFIPCENEKISKQ 492
Query: 61 --IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVH 118
+ +V+ R N +I W+ + + + ++T ++ T + +
Sbjct: 493 LHLCYNIVKDRYVRVSN---NNQTISGWENGVWKMESIFRKVETDWHMITVFTPMLIFLV 549
Query: 119 PYEV 122
P ++
Sbjct: 550 PLKL 553
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 27.7 bits (60), Expect = 4.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 10 RLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
RLLL PR + + SPP +P+ S G P + + V P
Sbjct: 90 RLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAP 133
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 27.7 bits (60), Expect = 4.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 10 RLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
RLLL PR + + SPP +P+ S G P + + V P
Sbjct: 90 RLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAP 133
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 27.7 bits (60), Expect = 4.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 10 RLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 53
RLLL PR + + SPP +P+ S G P + + V P
Sbjct: 101 RLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAP 144
>gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens]
Length = 532
Score = 27.7 bits (60), Expect = 4.1
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 20 TMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIARAV 65
T G P T P+P +GSG + S A + K K +RAV
Sbjct: 376 TATKGVPATNPAPGKGTGSGLI--GASGATMPTDTSKSEKLASRAV 419
>gi|5453810 netrin 3 [Homo sapiens]
Length = 580
Score = 27.7 bits (60), Expect = 4.1
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 11 LLLLPRVLLTMASGSPPTQPSPASDSGS---GYVPGSVSAA 48
LLL L S PP P D G G VPG V+AA
Sbjct: 8 LLLTAGTLFAALSPGPPAPADPCHDEGGAPRGCVPGLVNAA 48
>gi|4503129 catenin, alpha-like 1 [Homo sapiens]
Length = 734
Score = 27.7 bits (60), Expect = 4.1
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 30 PSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGK 89
P PA G+G V GS S+ F EI VE+ L + L+ QIT++ K
Sbjct: 5 PGPAGVGGAGAVYGSGSSGFAL----DSGLEIKTRSVEQTL---LPLVSQITTLINHKDN 57
Query: 90 IEEDSEVLMMIK 101
++ + L I+
Sbjct: 58 TKKSDKTLQAIQ 69
>gi|187608767 E74-like factor 4 [Homo sapiens]
Length = 663
Score = 27.3 bits (59), Expect = 5.4
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 12 LLLPRVLLTMASGSPPTQPSPASDSGSGYV------PGSVSAAFVTCPNEKVAKEI 61
L+L + +A + PT P+P + +G+G PG+V AAF+ A +
Sbjct: 481 LILSGLPQLLAGANRPTNPAPPTVTGAGPAGPSSQPPGTVIAAFIRTSGTTAAPRV 536
>gi|4503555 E74-like factor 4 [Homo sapiens]
Length = 663
Score = 27.3 bits (59), Expect = 5.4
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 12 LLLPRVLLTMASGSPPTQPSPASDSGSGYV------PGSVSAAFVTCPNEKVAKEI 61
L+L + +A + PT P+P + +G+G PG+V AAF+ A +
Sbjct: 481 LILSGLPQLLAGANRPTNPAPPTVTGAGPAGPSSQPPGTVIAAFIRTSGTTAAPRV 536
>gi|19923597 Sin3A-associated protein, 130kDa isoform b [Homo
sapiens]
Length = 1048
Score = 27.3 bits (59), Expect = 5.4
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 13/100 (13%)
Query: 15 PRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACV 74
P + +A+ SPP+QP+ A + G VP +T P +A +V + V
Sbjct: 722 PTIPTMIAAASPPSQPAVALSTIPGAVP-------ITPPITTIAAAPPPSVTVGGSLSSV 774
Query: 75 NLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFV 114
L P + I K++E+ E + +++ S++ P T+ V
Sbjct: 775 -LGPPVPEI-----KVKEEVEPMDIMRPVSAVPPLATNTV 808
>gi|225579127 Sin3A-associated protein, 130kDa isoform a [Homo
sapiens]
Length = 1083
Score = 27.3 bits (59), Expect = 5.4
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 13/100 (13%)
Query: 15 PRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACV 74
P + +A+ SPP+QP+ A + G VP +T P +A +V + V
Sbjct: 757 PTIPTMIAAASPPSQPAVALSTIPGAVP-------ITPPITTIAAAPPPSVTVGGSLSSV 809
Query: 75 NLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFV 114
L P + I K++E+ E + +++ S++ P T+ V
Sbjct: 810 -LGPPVPEI-----KVKEEVEPMDIMRPVSAVPPLATNTV 843
>gi|7662208 GTPase regulator associated with the focal adhesion
kinase pp125 isoform a [Homo sapiens]
Length = 814
Score = 27.3 bits (59), Expect = 5.4
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 25 SPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIP 78
S P+ P P S + S P A FV V +AR+ + + VN +P
Sbjct: 681 SAPSSPMPTSSTSSDSSPVRSVAGFVWFSVAAVVLSLARSSLHAVFSLLVNFVP 734
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,825,669
Number of Sequences: 37866
Number of extensions: 245163
Number of successful extensions: 1506
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1481
Number of HSP's gapped (non-prelim): 59
length of query: 156
length of database: 18,247,518
effective HSP length: 94
effective length of query: 62
effective length of database: 14,688,114
effective search space: 910663068
effective search space used: 910663068
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.