Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 61966731
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61966731 transmembrane protein 82 [Homo sapiens]
(343 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61966731 transmembrane protein 82 [Homo sapiens] 679 0.0
gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens] 32 0.83
gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens] 32 0.83
gi|117168283 N-acetyltransferase 8B [Homo sapiens] 32 1.1
gi|16554564 caspase recruitment domain family, member 6 [Homo sa... 32 1.1
gi|213972621 ATPase type 13A2 isoform 3 [Homo sapiens] 31 1.4
gi|213972619 ATPase type 13A2 isoform 2 [Homo sapiens] 31 1.4
gi|13435129 ATPase type 13A2 isoform 1 [Homo sapiens] 31 1.4
gi|117190517 N-acetyltransferase 8 [Homo sapiens] 31 1.8
gi|149274653 patched domain containing 2 [Homo sapiens] 31 1.8
gi|239757423 PREDICTED: hypothetical protein XP_002345427 isofor... 29 5.4
gi|239757421 PREDICTED: hypothetical protein XP_002345428 isofor... 29 5.4
gi|239751940 PREDICTED: hypothetical protein XP_002348044 isofor... 29 5.4
gi|239751938 PREDICTED: hypothetical protein XP_002348045 isofor... 29 5.4
gi|239746423 PREDICTED: hypothetical protein XP_002344208 isofor... 29 5.4
gi|239746421 PREDICTED: hypothetical protein XP_002344209 isofor... 29 5.4
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 29 7.0
gi|89191863 dopamine receptor D3 isoform e [Homo sapiens] 28 9.1
gi|89191861 dopamine receptor D3 isoform a [Homo sapiens] 28 9.1
gi|5902104 SRY (sex determining region Y)-box 10 [Homo sapiens] 28 9.1
gi|5729722 actin-like 7B [Homo sapiens] 28 9.1
>gi|61966731 transmembrane protein 82 [Homo sapiens]
Length = 343
Score = 679 bits (1751), Expect = 0.0
Identities = 343/343 (100%), Positives = 343/343 (100%)
Query: 1 MFSLPSLPSWLPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRP 60
MFSLPSLPSWLPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRP
Sbjct: 1 MFSLPSLPSWLPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRP 60
Query: 61 EKERLRAQWASLETVHLAGLALFLTVVGSRVAALVVLEFSLRAVSTLLSLGKGSQGAAER 120
EKERLRAQWASLETVHLAGLALFLTVVGSRVAALVVLEFSLRAVSTLLSLGKGSQGAAER
Sbjct: 61 EKERLRAQWASLETVHLAGLALFLTVVGSRVAALVVLEFSLRAVSTLLSLGKGSQGAAER 120
Query: 121 LQLYLLCQYSLGCGLTCGLSFLQEGAPHRTLNLLLSLGLATLLGLGARRLHRHVCRLYEL 180
LQLYLLCQYSLGCGLTCGLSFLQEGAPHRTLNLLLSLGLATLLGLGARRLHRHVCRLYEL
Sbjct: 121 LQLYLLCQYSLGCGLTCGLSFLQEGAPHRTLNLLLSLGLATLLGLGARRLHRHVCRLYEL 180
Query: 181 HSSQRYCGVCLGLLAHAHGLPQLLGRALAIAFAVGDLAAVALINQDFLTTSEAMRFWTPL 240
HSSQRYCGVCLGLLAHAHGLPQLLGRALAIAFAVGDLAAVALINQDFLTTSEAMRFWTPL
Sbjct: 181 HSSQRYCGVCLGLLAHAHGLPQLLGRALAIAFAVGDLAAVALINQDFLTTSEAMRFWTPL 240
Query: 241 TICYTLLVIYMQEEQRQHPGLQSQVQTVLVRMGGLFVLLLTVGRWLDLLGILVSLLGELW 300
TICYTLLVIYMQEEQRQHPGLQSQVQTVLVRMGGLFVLLLTVGRWLDLLGILVSLLGELW
Sbjct: 241 TICYTLLVIYMQEEQRQHPGLQSQVQTVLVRMGGLFVLLLTVGRWLDLLGILVSLLGELW 300
Query: 301 CLVGVRTLLDLCQIQDFPSQRPPVSTPSQPLPSAPQSQSSAPS 343
CLVGVRTLLDLCQIQDFPSQRPPVSTPSQPLPSAPQSQSSAPS
Sbjct: 301 CLVGVRTLLDLCQIQDFPSQRPPVSTPSQPLPSAPQSQSSAPS 343
>gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens]
Length = 1123
Score = 32.0 bits (71), Expect = 0.83
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 277 VLLLTVGRWLDLLGILVSLLGELWCLVGVRTLLDLCQIQDFPSQRPPVSTPSQPLPSAPQ 336
VLLL R L I V L G+ + G R + + P RP T S PLP +PQ
Sbjct: 449 VLLLEQARQQSTL-IAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQ 507
Query: 337 S 337
+
Sbjct: 508 A 508
>gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens]
Length = 1122
Score = 32.0 bits (71), Expect = 0.83
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 277 VLLLTVGRWLDLLGILVSLLGELWCLVGVRTLLDLCQIQDFPSQRPPVSTPSQPLPSAPQ 336
VLLL R L I V L G+ + G R + + P RP T S PLP +PQ
Sbjct: 448 VLLLEQARQQSTL-IAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQ 506
Query: 337 S 337
+
Sbjct: 507 A 507
>gi|117168283 N-acetyltransferase 8B [Homo sapiens]
Length = 227
Score = 31.6 bits (70), Expect = 1.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 266 QTVLVRMGGLFVLLLTVGRWLDLLGILVSLLGELWCL 302
+T+++ +GG LLL G W+ L +SLL LW L
Sbjct: 41 RTLILLLGGALALLLVSGSWILALVFSLSLLPALWFL 77
>gi|16554564 caspase recruitment domain family, member 6 [Homo
sapiens]
Length = 1037
Score = 31.6 bits (70), Expect = 1.1
Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 315 QDFPSQR-PPVSTPSQPLPSAPQSQSSAPS 343
Q PSQ PP S PSQP P P+S S+ PS
Sbjct: 991 QPKPSQPWPPQSKPSQPRPPQPKSSSTNPS 1020
>gi|213972621 ATPase type 13A2 isoform 3 [Homo sapiens]
Length = 1158
Score = 31.2 bits (69), Expect = 1.4
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 10/56 (17%)
Query: 11 LPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRPEKERLR 66
LP +PSLE L ++G + LG+LV+ +LLK PQ P + LR
Sbjct: 690 LPTVPSLEAAQQLTRDTVEGDLSLLGLLVMRNLLK----------PQTTPVIQALR 735
>gi|213972619 ATPase type 13A2 isoform 2 [Homo sapiens]
Length = 1175
Score = 31.2 bits (69), Expect = 1.4
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 10/56 (17%)
Query: 11 LPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRPEKERLR 66
LP +PSLE L ++G + LG+LV+ +LLK PQ P + LR
Sbjct: 690 LPTVPSLEAAQQLTRDTVEGDLSLLGLLVMRNLLK----------PQTTPVIQALR 735
>gi|13435129 ATPase type 13A2 isoform 1 [Homo sapiens]
Length = 1180
Score = 31.2 bits (69), Expect = 1.4
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 10/56 (17%)
Query: 11 LPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRPEKERLR 66
LP +PSLE L ++G + LG+LV+ +LLK PQ P + LR
Sbjct: 695 LPTVPSLEAAQQLTRDTVEGDLSLLGLLVMRNLLK----------PQTTPVIQALR 740
>gi|117190517 N-acetyltransferase 8 [Homo sapiens]
Length = 227
Score = 30.8 bits (68), Expect = 1.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 266 QTVLVRMGGLFVLLLTVGRWLDLLGILVSLLGELWCL 302
+T+++ +GG LLL G WL L +SL LW L
Sbjct: 41 RTLILLLGGPLALLLVSGSWLLALVFSISLFPALWFL 77
>gi|149274653 patched domain containing 2 [Homo sapiens]
Length = 1392
Score = 30.8 bits (68), Expect = 1.8
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 6/149 (4%)
Query: 19 WGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRPEKERLRAQWASLETVHLA 78
W ++++ ++ V L++ Y G N P + E R + QW +LE V
Sbjct: 1231 WEMGAVEAISLSILVGSSVDYCVHLVEGYLLAG-ENLPPHQAEDARTQRQWRTLEAVRHV 1289
Query: 79 GLALFLTVVGSRVAALVVLEFSLRAVSTLLSLGKGSQGAAERLQLYLLCQYSLGCGLTCG 138
G+A+ + + + V A V L F + ++ GK LY L + G+
Sbjct: 1290 GVAIVSSAL-TTVIATVPLFFCI--IAPFAKFGKIVALNTGVSILYTLTVSTALLGIMAP 1346
Query: 139 LSFLQEGAPHRTLNLLLSLGLATLLGLGA 167
SF + L L ++ LA LGLGA
Sbjct: 1347 SSFTRTRTSF--LKALGAVLLAGALGLGA 1373
>gi|239757423 PREDICTED: hypothetical protein XP_002345427 isoform 1
[Homo sapiens]
Length = 195
Score = 29.3 bits (64), Expect = 5.4
Identities = 31/103 (30%), Positives = 40/103 (38%), Gaps = 11/103 (10%)
Query: 8 PSWLPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRPEKERLRA 67
PSW+ + W L LL GL G L +L+ L F G L +
Sbjct: 86 PSWIQWWSTSNWRQPL-QRLLWGLEGILYLLLALMLCHALFTTG----------SHLLSS 134
Query: 68 QWASLETVHLAGLALFLTVVGSRVAALVVLEFSLRAVSTLLSL 110
W + V L L +V S + AL+ L STLLSL
Sbjct: 135 LWPVVAAVWRHLLPALLLLVLSALPALLFTASFLLLFSTLLSL 177
>gi|239757421 PREDICTED: hypothetical protein XP_002345428 isoform 2
[Homo sapiens]
Length = 152
Score = 29.3 bits (64), Expect = 5.4
Identities = 31/103 (30%), Positives = 40/103 (38%), Gaps = 11/103 (10%)
Query: 8 PSWLPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRPEKERLRA 67
PSW+ + W L LL GL G L +L+ L F G L +
Sbjct: 43 PSWIQWWSTSNWRQPL-QRLLWGLEGILYLLLALMLCHALFTTG----------SHLLSS 91
Query: 68 QWASLETVHLAGLALFLTVVGSRVAALVVLEFSLRAVSTLLSL 110
W + V L L +V S + AL+ L STLLSL
Sbjct: 92 LWPVVAAVWRHLLPALLLLVLSALPALLFTASFLLLFSTLLSL 134
>gi|239751940 PREDICTED: hypothetical protein XP_002348044 isoform 1
[Homo sapiens]
Length = 195
Score = 29.3 bits (64), Expect = 5.4
Identities = 31/103 (30%), Positives = 40/103 (38%), Gaps = 11/103 (10%)
Query: 8 PSWLPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRPEKERLRA 67
PSW+ + W L LL GL G L +L+ L F G L +
Sbjct: 86 PSWIQWWSTSNWRQPL-QRLLWGLEGILYLLLALMLCHALFTTG----------SHLLSS 134
Query: 68 QWASLETVHLAGLALFLTVVGSRVAALVVLEFSLRAVSTLLSL 110
W + V L L +V S + AL+ L STLLSL
Sbjct: 135 LWPVVAAVWRHLLPALLLLVLSALPALLFTASFLLLFSTLLSL 177
>gi|239751938 PREDICTED: hypothetical protein XP_002348045 isoform 2
[Homo sapiens]
Length = 152
Score = 29.3 bits (64), Expect = 5.4
Identities = 31/103 (30%), Positives = 40/103 (38%), Gaps = 11/103 (10%)
Query: 8 PSWLPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRPEKERLRA 67
PSW+ + W L LL GL G L +L+ L F G L +
Sbjct: 43 PSWIQWWSTSNWRQPL-QRLLWGLEGILYLLLALMLCHALFTTG----------SHLLSS 91
Query: 68 QWASLETVHLAGLALFLTVVGSRVAALVVLEFSLRAVSTLLSL 110
W + V L L +V S + AL+ L STLLSL
Sbjct: 92 LWPVVAAVWRHLLPALLLLVLSALPALLFTASFLLLFSTLLSL 134
>gi|239746423 PREDICTED: hypothetical protein XP_002344208 isoform 1
[Homo sapiens]
Length = 195
Score = 29.3 bits (64), Expect = 5.4
Identities = 31/103 (30%), Positives = 40/103 (38%), Gaps = 11/103 (10%)
Query: 8 PSWLPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRPEKERLRA 67
PSW+ + W L LL GL G L +L+ L F G L +
Sbjct: 86 PSWIQWWSTSNWRQPL-QRLLWGLEGILYLLLALMLCHALFTTG----------SHLLSS 134
Query: 68 QWASLETVHLAGLALFLTVVGSRVAALVVLEFSLRAVSTLLSL 110
W + V L L +V S + AL+ L STLLSL
Sbjct: 135 LWPVVAAVWRHLLPALLLLVLSALPALLFTASFLLLFSTLLSL 177
>gi|239746421 PREDICTED: hypothetical protein XP_002344209 isoform 2
[Homo sapiens]
Length = 152
Score = 29.3 bits (64), Expect = 5.4
Identities = 31/103 (30%), Positives = 40/103 (38%), Gaps = 11/103 (10%)
Query: 8 PSWLPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRPEKERLRA 67
PSW+ + W L LL GL G L +L+ L F G L +
Sbjct: 43 PSWIQWWSTSNWRQPL-QRLLWGLEGILYLLLALMLCHALFTTG----------SHLLSS 91
Query: 68 QWASLETVHLAGLALFLTVVGSRVAALVVLEFSLRAVSTLLSL 110
W + V L L +V S + AL+ L STLLSL
Sbjct: 92 LWPVVAAVWRHLLPALLLLVLSALPALLFTASFLLLFSTLLSL 134
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 28.9 bits (63), Expect = 7.0
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 311 LCQIQDFPSQRPPVSTPSQPLPSAP--QSQSSAP 342
+C + + P+ P S+P PL S P SQ SAP
Sbjct: 1315 ICPVAEHPAPEAPESSPPLPLSSLPPEASQDSAP 1348
>gi|89191863 dopamine receptor D3 isoform e [Homo sapiens]
Length = 367
Score = 28.5 bits (62), Expect = 9.1
Identities = 46/211 (21%), Positives = 86/211 (40%), Gaps = 21/211 (9%)
Query: 77 LAGLALFLTVV-GSRVAALVVLEFSLRAVSTLLSLGKGSQGAAERLQLYLLCQYSLGCGL 135
L+ AL L +V G+ + + VL+ RA+ T + S A+ L L+ + + +
Sbjct: 34 LSYCALILAIVFGNGLVCMAVLKE--RALQTTTNYLVVSLAVADLLVATLVMPWVVYLEV 91
Query: 136 TCGLSFLQEGAPHRTLNLLLSLGLATLLGLGARRLHRHVCRLYELH----SSQRYCG--- 188
T G+ + L + + A++L L A + R+ + +H + Q C
Sbjct: 92 TGGVWNFSRICCDVFVTLDVMMCTASILNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVA 151
Query: 189 ---VCLGLLAHAHGLPQLLGRALAIAFAVGDLAAVALINQDFLTTSEAMRFWTPL---TI 242
+ +LA A P L G GD ++ N DF+ S + F+ P +
Sbjct: 152 LMITAVWVLAFAVSCPLLFGFN-----TTGDPTVCSISNPDFVIYSSVVSFYLPFGVTVL 206
Query: 243 CYTLLVIYMQEEQRQHPGLQSQVQTVLVRMG 273
Y + + +++ +R+ + Q VR G
Sbjct: 207 VYARIYVVLKQRRRKRILTRQNSQCNSVRPG 237
>gi|89191861 dopamine receptor D3 isoform a [Homo sapiens]
Length = 400
Score = 28.5 bits (62), Expect = 9.1
Identities = 46/211 (21%), Positives = 86/211 (40%), Gaps = 21/211 (9%)
Query: 77 LAGLALFLTVV-GSRVAALVVLEFSLRAVSTLLSLGKGSQGAAERLQLYLLCQYSLGCGL 135
L+ AL L +V G+ + + VL+ RA+ T + S A+ L L+ + + +
Sbjct: 34 LSYCALILAIVFGNGLVCMAVLKE--RALQTTTNYLVVSLAVADLLVATLVMPWVVYLEV 91
Query: 136 TCGLSFLQEGAPHRTLNLLLSLGLATLLGLGARRLHRHVCRLYELH----SSQRYCG--- 188
T G+ + L + + A++L L A + R+ + +H + Q C
Sbjct: 92 TGGVWNFSRICCDVFVTLDVMMCTASILNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVA 151
Query: 189 ---VCLGLLAHAHGLPQLLGRALAIAFAVGDLAAVALINQDFLTTSEAMRFWTPL---TI 242
+ +LA A P L G GD ++ N DF+ S + F+ P +
Sbjct: 152 LMITAVWVLAFAVSCPLLFGFN-----TTGDPTVCSISNPDFVIYSSVVSFYLPFGVTVL 206
Query: 243 CYTLLVIYMQEEQRQHPGLQSQVQTVLVRMG 273
Y + + +++ +R+ + Q VR G
Sbjct: 207 VYARIYVVLKQRRRKRILTRQNSQCNSVRPG 237
>gi|5902104 SRY (sex determining region Y)-box 10 [Homo sapiens]
Length = 466
Score = 28.5 bits (62), Expect = 9.1
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 318 PSQRPPVSTPSQPLPSAPQSQS 339
PSQRP + S P PS PQS S
Sbjct: 430 PSQRPLYTAISDPSPSGPQSHS 451
>gi|5729722 actin-like 7B [Homo sapiens]
Length = 415
Score = 28.5 bits (62), Expect = 9.1
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Query: 154 LLSLGLATLLGLGARRLHRHVCRLYELHSSQRYCGVCLGLLAHAHGLPQLLGRALAIAFA 213
L G AT L + R++H+ + +L S CG G + + +G+ A
Sbjct: 30 LRDTGAATQLKMKPRKVHKIKAVIIDLGSQYCKCGYA-GEPRPTYFISSTVGKRCPEAAD 88
Query: 214 VGDLAAVALINQDFLTTSEAMRFWTPL 240
GD L+ + L T ++ PL
Sbjct: 89 AGDTRKWTLVGHELLNTEAPLKLVNPL 115
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.140 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,376,549
Number of Sequences: 37866
Number of extensions: 570668
Number of successful extensions: 3556
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3544
Number of HSP's gapped (non-prelim): 23
length of query: 343
length of database: 18,247,518
effective HSP length: 103
effective length of query: 240
effective length of database: 14,347,320
effective search space: 3443356800
effective search space used: 3443356800
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.