ITM2C 3488

Name: ITM2C	Sequence: fasta or formatted (267aa)		NCBI GI: 13569885
Description: integral membrane protein 2C isoform 1		Referenced in: Additional Brain Proteins
Other entries for this name: alt prot [220aa] integral membrane protein 2C isoform 3 alt prot [230aa] integral membrane protein 2C isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 19 1 C cysteine 2.2 6 1 D aspartate 4.9 13 1 E glutamate 6.4 17 2 F phenylalanine 4.5 12 2 G glycine 6.7 18 3 H histidine 2.2 6 1 I isoleucine 6.4 17 2 K lysine 4.5 12 1 L leucine 8.6 23 2 M methionine 2.6 7 1 N asparagine 4.1 11 1 P proline 4.5 12 2 Q glutamine 3.7 10 1 R arginine 7.5 20 3 S serine 5.2 14 2 T threonine 4.9 13 2 V valine 8.6 23 2 W tryptophan 0.4 1 1 Y tyrosine 4.9 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 integral membrane protein 2C isoform 1 ITM2C 0.816 integral membrane protein 2C isoform 2 ITM2C 0.773 integral membrane protein 2C isoform 3 ITM2B 0.384 integral membrane protein 2B ITM2A 0.291 integral membrane protein 2A LECT1 0.012 leukocyte cell derived chemotaxin 1 isoform 2 precur... LECT1 0.012 leukocyte cell derived chemotaxin 1 isoform 1 precurs... H1FX 0.010 H1 histone family, member X C1orf25 0.010 N2,N2-dimethylguanosine tRNA methyltransferase-like... SRGAP3 0.008 SLIT-ROBO Rho GTPase activating protein 3 isoform b ... SRGAP3 0.008 SLIT-ROBO Rho GTPase activating protein 3 isoform a ... LILRB5 0.008 leukocyte immunoglobulin-like receptor, subfamily B... LILRB5 0.008 leukocyte immunoglobulin-like receptor, subfamily B... FZD7 0.008 frizzled 7 COL10A1 0.008 type X collagen alpha 1 precursor MFAP2 0.008 microfibrillar-associated protein 2 isoform b precu... MFAP2 0.008 microfibrillar-associated protein 2 isoform b precu... MFAP2 0.008 microfibrillar-associated protein 2 isoform a precurs... MFAP2 0.008 microfibrillar-associated protein 2 isoform a precurs... RAD51AP2 0.008 RAD51 associated protein 2 ZNF74 0.008 zinc finger protein 74 LOC100294312 0.006 PREDICTED: hypothetical protein XP_002344082 LOC100294220 0.006 PREDICTED: hypothetical protein LOC100294184 0.006 PREDICTED: hypothetical protein DUSP21 0.006 dual specificity phosphatase 21 POM121C 0.006 POM121 membrane glycoprotein (rat)-like FAM108C1 0.006 hypothetical protein LOC58489 TNMD 0.006 tenomodulin MARCKS 0.006 myristoylated alanine-rich protein kinase C substra... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.