Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GOSR2 Sequence: fasta or formatted (195aa) NCBI GI: 60499013
Description:

golgi SNAP receptor complex member 2 isoform C

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [213aa] golgi SNAP receptor complex member 2 isoform B
alt prot [212aa] golgi SNAP receptor complex member 2 isoform A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1          6           1
 C cysteine            2.1          4           1
 D aspartate           6.7         13           2
 E glutamate           6.7         13           2
 F phenylalanine       4.1          8           1
 G glycine             3.1          6           1
 H histidine           4.1          8           1
 I isoleucine          7.2         14           1
 K lysine              4.1          8           1
 L leucine            11.8         23           2
 M methionine          2.1          4           1
 N asparagine          4.6          9           1
 P proline             2.6          5           2
 Q glutamine          10.8         21           2
 R arginine            8.2         16           2
 S serine              7.7         15           2
 T threonine           5.6         11           2
 V valine              4.6          9           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   golgi SNAP receptor complex member 2 isoform C [Homo... 
GOSR2                 0.805   golgi SNAP receptor complex member 2 isoform A [Homo...
GOSR2                 0.805   golgi SNAP receptor complex member 2 isoform B [Homo...
CAGE1                 0.044   cancer antigen 1 
ANKRD62               0.038   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.038   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD62               0.038   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
DMD                   0.033   dystrophin Dp427c isoform 
DMD                   0.033   dystrophin Dp260-2 isoform 
DMD                   0.033   dystrophin Dp260-1 isoform 
DMD                   0.033   dystrophin Dp427p2 isoform 
DMD                   0.033   dystrophin Dp427p1 isoform 
DMD                   0.033   dystrophin Dp427l isoform 
DMD                   0.033   dystrophin Dp427m isoform 
MYH8                  0.033   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH6                  0.030   myosin heavy chain 6 
MYH4                  0.030   myosin, heavy polypeptide 4, skeletal muscle 
MYH7                  0.030   myosin, heavy chain 7, cardiac muscle, beta 
HOOK1                 0.027   hook homolog 1 
KIF21A                0.027   kinesin family member 21A 
RNF40                 0.027   ring finger protein 40 
CCDC6                 0.027   coiled-coil domain containing 6 
RAD50                 0.025   RAD50 homolog isoform 2 
RAD50                 0.025   RAD50 homolog isoform 1 
CENPF                 0.025   centromere protein F 
BAT2D1                0.025   HBxAg transactivated protein 2 
KIF21B                0.022   kinesin family member 21B 
KRT1                  0.022   keratin 1 
C11orf30              0.022   EMSY protein 
ATRX                  0.022   transcriptional regulator ATRX isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press