BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|6006001 glutathione peroxidase 3 precursor [Homo sapiens] (226 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|6006001 glutathione peroxidase 3 precursor [Homo sapiens] 464 e-131 gi|33186887 glutathione peroxidase 6 [Homo sapiens] 330 5e-91 gi|4557629 glutathione peroxidase 5 isoform 1 precursor [Homo sa... 323 7e-89 gi|41406084 glutathione peroxidase 1 isoform 1 [Homo sapiens] 162 2e-40 gi|32967607 glutathione peroxidase 2 [Homo sapiens] 146 1e-35 gi|6715602 glutathione peroxidase 5 isoform 2 precursor [Homo sa... 92 3e-19 gi|75709200 glutathione peroxidase 4 isoform A precursor [Homo s... 84 7e-17 gi|90903240 glutathione peroxidase 4 isoform C precursor [Homo s... 82 4e-16 gi|15618997 glutathione peroxidase 7 [Homo sapiens] 82 5e-16 gi|90903238 glutathione peroxidase 4 isoform B precursor [Homo s... 77 9e-15 gi|192455698 glutathione peroxidase 8 [Homo sapiens] 74 1e-13 gi|41406082 glutathione peroxidase 1 isoform 2 [Homo sapiens] 63 2e-10 gi|28559065 DNA cytosine-5 methyltransferase 3 beta isoform 6 [H... 30 1.7 gi|28559063 DNA cytosine-5 methyltransferase 3 beta isoform 3 [H... 30 1.7 gi|28559061 DNA cytosine-5 methyltransferase 3 beta isoform 2 [H... 30 1.7 gi|5901940 DNA cytosine-5 methyltransferase 3 beta isoform 1 [Ho... 30 1.7 gi|40018629 hypothetical protein LOC23325 [Homo sapiens] 29 2.9 gi|116292750 lipoprotein Lp(a) precursor [Homo sapiens] 29 3.7 gi|133922562 phosphoglucomutase 5 [Homo sapiens] 29 3.7 gi|27777671 keratinocyte associated protein 3 [Homo sapiens] 28 6.4 gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s... 28 8.3 gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa... 28 8.3 >gi|6006001 glutathione peroxidase 3 precursor [Homo sapiens] Length = 226 Score = 464 bits (1195), Expect = e-131 Identities = 226/226 (100%), Positives = 226/226 (100%) Query: 1 MARLLQASCLLSLLLAGFVSQSRGQEKSKMDCHGGISGTIYEYGALTIDGEEYIPFKQYA 60 MARLLQASCLLSLLLAGFVSQSRGQEKSKMDCHGGISGTIYEYGALTIDGEEYIPFKQYA Sbjct: 1 MARLLQASCLLSLLLAGFVSQSRGQEKSKMDCHGGISGTIYEYGALTIDGEEYIPFKQYA 60 Query: 61 GKYVLFVNVASYUGLTGQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLK 120 GKYVLFVNVASY GLTGQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLK Sbjct: 61 GKYVLFVNVASYUGLTGQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLK 120 Query: 121 YVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIR 180 YVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIR Sbjct: 121 YVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIR 180 Query: 181 WNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRRQAALGVKRK 226 WNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRRQAALGVKRK Sbjct: 181 WNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRRQAALGVKRK 226 >gi|33186887 glutathione peroxidase 6 [Homo sapiens] Length = 221 Score = 330 bits (847), Expect = 5e-91 Identities = 154/217 (70%), Positives = 181/217 (83%) Query: 1 MARLLQASCLLSLLLAGFVSQSRGQEKSKMDCHGGISGTIYEYGALTIDGEEYIPFKQYA 60 M + QASCL+ L GF Q+ + K+DC+ G++GTIYEYGALT++GEEYI FKQ+A Sbjct: 1 MFQQFQASCLVLFFLVGFAQQTLKPQNRKVDCNKGVTGTIYEYGALTLNGEEYIQFKQFA 60 Query: 61 GKYVLFVNVASYUGLTGQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLK 120 GK+VLFVNVA+Y GL QY ELNALQEEL FG+++L FPCNQFGKQEPG NSEIL LK Sbjct: 61 GKHVLFVNVAAYUGLAAQYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLK 120 Query: 121 YVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIR 180 YV PG GFVP+FQLFEKGDVNGEKEQK +TFLKNSCPPTS+LLG+S +LFWEPMKVHDIR Sbjct: 121 YVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWEPMKVHDIR 180 Query: 181 WNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRR 217 WNFEKFLVGPDG+P+M W H+ VS VK DIL Y+++ Sbjct: 181 WNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQ 217 >gi|4557629 glutathione peroxidase 5 isoform 1 precursor [Homo sapiens] Length = 221 Score = 323 bits (828), Expect = 7e-89 Identities = 152/217 (70%), Positives = 178/217 (82%) Query: 1 MARLLQASCLLSLLLAGFVSQSRGQEKSKMDCHGGISGTIYEYGALTIDGEEYIPFKQYA 60 M L+ LL LLLA FV S QEK KMDCH GTIY+Y A+ ++ EY+ FKQY Sbjct: 1 MTTQLRVVHLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYV 60 Query: 61 GKYVLFVNVASYUGLTGQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLK 120 GK++LFVNVA+Y GLT QY ELNALQEEL P+GLV+LGFPCNQFGKQEPG+N EILP LK Sbjct: 61 GKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK 120 Query: 121 YVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIR 180 YVRPGGGFVP+FQLFEKGDVNGEKEQK ++FLK+SCP SE+LGT + W+P+KVHDIR Sbjct: 121 YVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIR 180 Query: 181 WNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRR 217 WNFEKFLVGPDGIP+MRW HR TVS+VK DIL+Y+++ Sbjct: 181 WNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQ 217 >gi|41406084 glutathione peroxidase 1 isoform 1 [Homo sapiens] Length = 203 Score = 162 bits (410), Expect = 2e-40 Identities = 83/178 (46%), Positives = 111/178 (62%), Gaps = 5/178 (2%) Query: 39 TIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGLTGQ-YIELNALQEELAPFGLVIL 97 ++Y + A + G E + GK +L NVAS G T + Y ++N LQ L P GLV+L Sbjct: 15 SVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVL 74 Query: 98 GFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCP 157 GFPCNQFG QE +N EIL +LKYVRPGGGF PNF LFEK +VNG + FL+ + P Sbjct: 75 GFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALP 134 Query: 158 PTSE----LLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDI 211 S+ L+ + W P+ +D+ WNFEKFLVGPDG+P+ R+ R +++ DI Sbjct: 135 APSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDI 192 >gi|32967607 glutathione peroxidase 2 [Homo sapiens] Length = 190 Score = 146 bits (369), Expect = 1e-35 Identities = 78/181 (43%), Positives = 111/181 (61%), Gaps = 7/181 (3%) Query: 36 ISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGLTGQ-YIELNALQEELAPFGL 94 I+ + Y+ A+++DGE+ + F + G+ VL NVAS G T + + +LN LQ P L Sbjct: 4 IAKSFYDLSAISLDGEK-VDFNTFRGRAVLIENVASLUGTTTRDFTQLNELQCRF-PRRL 61 Query: 95 VILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKN 154 V+LGFPCNQFG QE +N EIL +LKYVRPGGG+ P F L +K +VNG+ E + +LK+ Sbjct: 62 VVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKD 121 Query: 155 SCP----PTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMD 210 P L+ + W P++ D+ WNFEKFL+GP+G P R+ N++ D Sbjct: 122 KLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEPD 181 Query: 211 I 211 I Sbjct: 182 I 182 >gi|6715602 glutathione peroxidase 5 isoform 2 precursor [Homo sapiens] Length = 100 Score = 92.4 bits (228), Expect = 3e-19 Identities = 47/89 (52%), Positives = 59/89 (66%) Query: 1 MARLLQASCLLSLLLAGFVSQSRGQEKSKMDCHGGISGTIYEYGALTIDGEEYIPFKQYA 60 M L+ LL LLLA FV S QEK KMDCH GTIY+Y A+ ++ EY+ FKQY Sbjct: 1 MTTQLRVVHLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYV 60 Query: 61 GKYVLFVNVASYUGLTGQYIELNALQEEL 89 GK++LFVNVA+Y GLT QY ++ E+L Sbjct: 61 GKHILFVNVATYCGLTAQYPGMSVQGEDL 89 >gi|75709200 glutathione peroxidase 4 isoform A precursor [Homo sapiens] Length = 197 Score = 84.3 bits (207), Expect = 7e-17 Identities = 64/199 (32%), Positives = 93/199 (46%), Gaps = 25/199 (12%) Query: 1 MARLLQASCLLSLLLAGFVSQSRGQEKSKMDCHGGISGTIYEYGALTIDGEEYIPFKQYA 60 + RLL+ + L L A ++ + + C + +++E+ A IDG + +Y Sbjct: 6 LCRLLKPALLCGALAAPGLAGTMCASRDDWRC----ARSMHEFSAKDIDGH-MVNLDKYR 60 Query: 61 GKYVLFVNVASYUGLTG-QYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTL 119 G + NVAS G T Y +L L A GL IL FPCNQFGKQEPG N EI Sbjct: 61 GFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEF- 119 Query: 120 KYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDI 179 G+ F +F K VNG+ + ++K P +LG + I Sbjct: 120 -----AAGYNVKFDMFSKICVNGDDAHPLWKWMKIQ-PKGKGILGNA------------I 161 Query: 180 RWNFEKFLVGPDGIPIMRW 198 +WNF KFL+ +G + R+ Sbjct: 162 KWNFTKFLIDKNGCVVKRY 180 >gi|90903240 glutathione peroxidase 4 isoform C precursor [Homo sapiens] Length = 234 Score = 82.0 bits (201), Expect = 4e-16 Identities = 57/161 (35%), Positives = 78/161 (48%), Gaps = 21/161 (13%) Query: 39 TIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGLTG-QYIELNALQEELAPFGLVIL 97 +++E+ A IDG + +Y G + NVAS G T Y +L L A GL IL Sbjct: 77 SMHEFSAKDIDGH-MVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRIL 135 Query: 98 GFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCP 157 FPCNQFGKQEPG N EI G+ F +F K VNG+ + ++K P Sbjct: 136 AFPCNQFGKQEPGSNEEIKEF------AAGYNVKFDMFSKICVNGDDAHPLWKWMKIQ-P 188 Query: 158 PTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRW 198 +LG + I+WNF KFL+ +G + R+ Sbjct: 189 KGKGILGNA------------IKWNFTKFLIDKNGCVVKRY 217 >gi|15618997 glutathione peroxidase 7 [Homo sapiens] Length = 187 Score = 81.6 bits (200), Expect = 5e-16 Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 26/178 (14%) Query: 41 YEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGLTGQ-YIELNALQEELAPFGLVILGF 99 Y++ A+ I G+ + ++Y G L VNVAS G T Q Y L LQ +L P +L F Sbjct: 26 YDFKAVNIRGK-LVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAF 84 Query: 100 PCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPT 159 PCNQFG+QEP N EI + + +F +F K V G + +L Sbjct: 85 PCNQFGQQEPDSNKEIESFARRT-----YSVSFPMFSKIAVTGTGAHPAFKYLAQ----- 134 Query: 160 SELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRR 217 TS + EP WNF K+LV PDG + W +V V+ I + +R+ Sbjct: 135 -----TSGK---EP------TWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALVRK 178 >gi|90903238 glutathione peroxidase 4 isoform B precursor [Homo sapiens] Length = 227 Score = 77.4 bits (189), Expect = 9e-15 Identities = 61/187 (32%), Positives = 86/187 (45%), Gaps = 25/187 (13%) Query: 1 MARLLQASCLLSLLLAGFVSQSRGQEKSKMDCHGGISGTIYEYGALTIDGEEYIPFKQYA 60 + RLL+ + L L A ++ + + C + +++E+ A IDG + +Y Sbjct: 6 LCRLLKPALLCGALAAPGLAGTMCASRDDWRC----ARSMHEFSAKDIDGH-MVNLDKYR 60 Query: 61 GKYVLFVNVASYUGLTG-QYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTL 119 G + NVAS G T Y +L L A GL IL FPCNQFGKQEPG N EI Sbjct: 61 GFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEF- 119 Query: 120 KYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDI 179 G+ F +F K VNG+ + ++K P +LG + I Sbjct: 120 -----AAGYNVKFDMFSKICVNGDDAHPLWKWMKIQ-PKGKGILGNA------------I 161 Query: 180 RWNFEKF 186 +WNF KF Sbjct: 162 KWNFTKF 168 >gi|192455698 glutathione peroxidase 8 [Homo sapiens] Length = 209 Score = 73.9 bits (180), Expect = 1e-13 Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 25/165 (15%) Query: 54 IPFKQYAGKYVLFVNVASYUGLTGQ-YIELNALQEELAPFGLVILGFPCNQFGKQEPGEN 112 + ++Y GK L VNVAS LT + Y+ L L +E P +L FPCNQFG+ EP + Sbjct: 60 VSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPS 119 Query: 113 SEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWE 172 E+ + R G F +F K + G + + + FL +S E Sbjct: 120 KEV---ESFARKNYGV--TFPIFHKIKILGSEGEPAFRFLVDSSKK-------------E 161 Query: 173 PMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRR 217 P RWNF K+LV P+G + W + ++ DI + +R+ Sbjct: 162 P------RWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALVRQ 200 >gi|41406082 glutathione peroxidase 1 isoform 2 [Homo sapiens] Length = 98 Score = 62.8 bits (151), Expect = 2e-10 Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 1/70 (1%) Query: 39 TIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGLTGQ-YIELNALQEELAPFGLVIL 97 ++Y + A + G E + GK +L NVAS G T + Y ++N LQ L P GLV+L Sbjct: 15 SVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVL 74 Query: 98 GFPCNQFGKQ 107 GFPCNQFG Q Sbjct: 75 GFPCNQFGHQ 84 >gi|28559065 DNA cytosine-5 methyltransferase 3 beta isoform 6 [Homo sapiens] Length = 845 Score = 30.0 bits (66), Expect = 1.7 Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 11/61 (18%) Query: 87 EELAPFGLVILGFPCNQFGKQEPGENS----------EILPTLKYVRP-GGGFVPNFQLF 135 EE PF LVI G PCN P E L Y RP G P F +F Sbjct: 629 EEWGPFDLVIGGSPCNDLSNVNPARKGLYEGTGRLFFEFYHLLNYSRPKEGDDRPFFWMF 688 Query: 136 E 136 E Sbjct: 689 E 689 >gi|28559063 DNA cytosine-5 methyltransferase 3 beta isoform 3 [Homo sapiens] Length = 770 Score = 30.0 bits (66), Expect = 1.7 Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 11/61 (18%) Query: 87 EELAPFGLVILGFPCNQFGKQEPGENS----------EILPTLKYVRP-GGGFVPNFQLF 135 EE PF LVI G PCN P E L Y RP G P F +F Sbjct: 617 EEWGPFDLVIGGSPCNDLSNVNPARKGLYEGTGRLFFEFYHLLNYSRPKEGDDRPFFWMF 676 Query: 136 E 136 E Sbjct: 677 E 677 >gi|28559061 DNA cytosine-5 methyltransferase 3 beta isoform 2 [Homo sapiens] Length = 833 Score = 30.0 bits (66), Expect = 1.7 Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 11/61 (18%) Query: 87 EELAPFGLVILGFPCNQFGKQEPGENS----------EILPTLKYVRP-GGGFVPNFQLF 135 EE PF LVI G PCN P E L Y RP G P F +F Sbjct: 617 EEWGPFDLVIGGSPCNDLSNVNPARKGLYEGTGRLFFEFYHLLNYSRPKEGDDRPFFWMF 676 Query: 136 E 136 E Sbjct: 677 E 677 >gi|5901940 DNA cytosine-5 methyltransferase 3 beta isoform 1 [Homo sapiens] Length = 853 Score = 30.0 bits (66), Expect = 1.7 Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 11/61 (18%) Query: 87 EELAPFGLVILGFPCNQFGKQEPGENS----------EILPTLKYVRP-GGGFVPNFQLF 135 EE PF LVI G PCN P E L Y RP G P F +F Sbjct: 637 EEWGPFDLVIGGSPCNDLSNVNPARKGLYEGTGRLFFEFYHLLNYSRPKEGDDRPFFWMF 696 Query: 136 E 136 E Sbjct: 697 E 697 >gi|40018629 hypothetical protein LOC23325 [Homo sapiens] Length = 1173 Score = 29.3 bits (64), Expect = 2.9 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 7/64 (10%) Query: 110 GENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRL 169 GE SEI KYV G FV +FQ+F D +KFY L + C + T++ + Sbjct: 304 GEPSEIDQRDKYVGICGLFVLHFQIFRTID------KKFYKSLLDICKKVPAITLTAN-I 356 Query: 170 FWEP 173 W P Sbjct: 357 IWFP 360 >gi|116292750 lipoprotein Lp(a) precursor [Homo sapiens] Length = 2040 Score = 28.9 bits (63), Expect = 3.7 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 5/48 (10%) Query: 96 ILGFPCNQFGKQEPGENSEILP-TLKYVRPGGGFVPNFQLFEKGDVNG 142 + G PC ++ QEP +S +P T K+ G N+ GD+NG Sbjct: 1736 VTGTPCQEWAAQEPHRHSTFIPGTNKW----AGLEKNYCRNPDGDING 1779 >gi|133922562 phosphoglucomutase 5 [Homo sapiens] Length = 567 Score = 28.9 bits (63), Expect = 3.7 Identities = 19/68 (27%), Positives = 25/68 (36%) Query: 61 GKYVLFVNVASYUGLTGQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLK 120 G L + + + G+ G Y+ E AP I P FG Q P N TL Sbjct: 219 GPSQLKIRIDAMHGVMGPYVRKVLCDELGAPANSAINCVPLEDFGGQHPDPNLTYATTLL 278 Query: 121 YVRPGGGF 128 GG + Sbjct: 279 EAMKGGEY 286 >gi|27777671 keratinocyte associated protein 3 [Homo sapiens] Length = 240 Score = 28.1 bits (61), Expect = 6.4 Identities = 13/33 (39%), Positives = 19/33 (57%) Query: 4 LLQASCLLSLLLAGFVSQSRGQEKSKMDCHGGI 36 LL +C L LLLA ++ + G + DCH G+ Sbjct: 104 LLSVACSLGLLLAVSLTVANGGRRLIADCHPGL 136 >gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo sapiens] Length = 3118 Score = 27.7 bits (60), Expect = 8.3 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 152 LKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVG-PDGIPIMRWHHRTTVSNVKMD 210 L+N P S LG+ D P K++D +W+ K + +GI + T+S K D Sbjct: 2814 LRNGLPYFSYDLGSGDTHTMIPTKINDGQWHKIKIMRSKQEGILYVDGASNRTISPKKAD 2873 Query: 211 IL 212 IL Sbjct: 2874 IL 2875 >gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sapiens] Length = 3122 Score = 27.7 bits (60), Expect = 8.3 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 152 LKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVG-PDGIPIMRWHHRTTVSNVKMD 210 L+N P S LG+ D P K++D +W+ K + +GI + T+S K D Sbjct: 2818 LRNGLPYFSYDLGSGDTHTMIPTKINDGQWHKIKIMRSKQEGILYVDGASNRTISPKKAD 2877 Query: 211 IL 212 IL Sbjct: 2878 IL 2879 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.140 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,839,205 Number of Sequences: 37866 Number of extensions: 410902 Number of successful extensions: 675 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 651 Number of HSP's gapped (non-prelim): 22 length of query: 226 length of database: 18,247,518 effective HSP length: 99 effective length of query: 127 effective length of database: 14,498,784 effective search space: 1841345568 effective search space used: 1841345568 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.