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Search of human proteins with 6005721
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6005721 ER lipid raft associated 2 isoform 1 [Homo sapiens]
(339 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6005721 ER lipid raft associated 2 isoform 1 [Homo sapiens] 660 0.0
gi|154800489 ER lipid raft associated 1 [Homo sapiens] 490 e-139
gi|154800487 ER lipid raft associated 1 [Homo sapiens] 490 e-139
gi|51242966 ER lipid raft associated 2 isoform 2 [Homo sapiens] 286 1e-77
gi|51242968 ER lipid raft associated 2 isoform 2 [Homo sapiens] 286 1e-77
gi|225579095 S-phase cyclin A-associated protein in the ER isofo... 41 0.001
gi|225579092 S-phase cyclin A-associated protein in the ER isofo... 41 0.001
gi|7657615 podocin [Homo sapiens] 39 0.009
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 39 0.009
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 39 0.009
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 39 0.009
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 39 0.009
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 39 0.009
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 39 0.009
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 39 0.009
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 39 0.009
gi|94538362 flotillin 2 [Homo sapiens] 38 0.015
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m... 37 0.025
gi|239745127 PREDICTED: similar to Putative golgin subfamily A m... 37 0.025
gi|4505257 moesin [Homo sapiens] 37 0.025
gi|19913410 major vault protein [Homo sapiens] 37 0.033
gi|19913412 major vault protein [Homo sapiens] 37 0.033
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens] 36 0.043
gi|94536782 tripartite motif-containing 35 isoform 2 [Homo sapiens] 36 0.043
gi|5031699 flotillin 1 [Homo sapiens] 36 0.056
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 36 0.056
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 35 0.073
gi|70166430 GRINL1A combined protein isoform 2 [Homo sapiens] 35 0.073
gi|70166414 GRINL1A combined protein isoform 1 [Homo sapiens] 35 0.073
gi|111494235 GRINL1A combined protein isoform 8 [Homo sapiens] 35 0.073
>gi|6005721 ER lipid raft associated 2 isoform 1 [Homo sapiens]
Length = 339
Score = 660 bits (1704), Expect = 0.0
Identities = 339/339 (100%), Positives = 339/339 (100%)
Query: 1 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK 60
MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK
Sbjct: 1 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK 60
Query: 61 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI 120
SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI
Sbjct: 61 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI 120
Query: 121 HHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIR 180
HHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIR
Sbjct: 121 HHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIR 180
Query: 181 RNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEK 240
RNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEK
Sbjct: 181 RNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEK 240
Query: 241 KISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKD 300
KISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKD
Sbjct: 241 KISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKD 300
Query: 301 IPNMFMDSAGSVSKQFEGLADKLSFGLEDEPLETATKEN 339
IPNMFMDSAGSVSKQFEGLADKLSFGLEDEPLETATKEN
Sbjct: 301 IPNMFMDSAGSVSKQFEGLADKLSFGLEDEPLETATKEN 339
>gi|154800489 ER lipid raft associated 1 [Homo sapiens]
Length = 348
Score = 490 bits (1261), Expect = e-139
Identities = 246/309 (79%), Positives = 273/309 (88%)
Query: 1 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK 60
M Q +VA L++++HKIEEGH+ VYYRGGALLTS SGPG+H+MLPFIT+++
Sbjct: 3 MTQARVLVAAVVGLVAVLLYASIHKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFR 62
Query: 61 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI 120
SVQTTLQTDEVKNVPCGTSGGVMIY DRIEVVN L P AV+DIV+NYTADYDK LIFNKI
Sbjct: 63 SVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKI 122
Query: 121 HHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIR 180
HHELNQFCS HTLQEVYIELFDQIDENLK ALQ+DL MAPGL IQAVRVTKP IPEAIR
Sbjct: 123 HHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEAIR 182
Query: 181 RNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEK 240
RN+ELME+EKTKLLIAAQKQKVVEKEAETERKKA+IEAEK+AQVA+I + QKVMEKETEK
Sbjct: 183 RNFELMEAEKTKLLIAAQKQKVVEKEAETERKKAVIEAEKIAQVAKIRFQQKVMEKETEK 242
Query: 241 KISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKD 300
+ISEIEDAAFLAREKAKADAE Y A K A +NK KLTPEYL+L KY+AIASNSKIYFG +
Sbjct: 243 RISEIEDAAFLAREKAKADAEYYAAHKYATSNKHKLTPEYLELKKYQAIASNSKIYFGSN 302
Query: 301 IPNMFMDSA 309
IPNMF+DS+
Sbjct: 303 IPNMFVDSS 311
>gi|154800487 ER lipid raft associated 1 [Homo sapiens]
Length = 348
Score = 490 bits (1261), Expect = e-139
Identities = 246/309 (79%), Positives = 273/309 (88%)
Query: 1 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK 60
M Q +VA L++++HKIEEGH+ VYYRGGALLTS SGPG+H+MLPFIT+++
Sbjct: 3 MTQARVLVAAVVGLVAVLLYASIHKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFR 62
Query: 61 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI 120
SVQTTLQTDEVKNVPCGTSGGVMIY DRIEVVN L P AV+DIV+NYTADYDK LIFNKI
Sbjct: 63 SVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKI 122
Query: 121 HHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIR 180
HHELNQFCS HTLQEVYIELFDQIDENLK ALQ+DL MAPGL IQAVRVTKP IPEAIR
Sbjct: 123 HHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEAIR 182
Query: 181 RNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEK 240
RN+ELME+EKTKLLIAAQKQKVVEKEAETERKKA+IEAEK+AQVA+I + QKVMEKETEK
Sbjct: 183 RNFELMEAEKTKLLIAAQKQKVVEKEAETERKKAVIEAEKIAQVAKIRFQQKVMEKETEK 242
Query: 241 KISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKD 300
+ISEIEDAAFLAREKAKADAE Y A K A +NK KLTPEYL+L KY+AIASNSKIYFG +
Sbjct: 243 RISEIEDAAFLAREKAKADAEYYAAHKYATSNKHKLTPEYLELKKYQAIASNSKIYFGSN 302
Query: 301 IPNMFMDSA 309
IPNMF+DS+
Sbjct: 303 IPNMFVDSS 311
>gi|51242966 ER lipid raft associated 2 isoform 2 [Homo sapiens]
Length = 152
Score = 286 bits (733), Expect = 1e-77
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK 60
MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK
Sbjct: 1 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK 60
Query: 61 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI 120
SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI
Sbjct: 61 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI 120
Query: 121 HHELNQFCSVHTLQEVYIELF 141
HHELNQFCSVHTLQEVYIELF
Sbjct: 121 HHELNQFCSVHTLQEVYIELF 141
>gi|51242968 ER lipid raft associated 2 isoform 2 [Homo sapiens]
Length = 152
Score = 286 bits (733), Expect = 1e-77
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK 60
MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK
Sbjct: 1 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK 60
Query: 61 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI 120
SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI
Sbjct: 61 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI 120
Query: 121 HHELNQFCSVHTLQEVYIELF 141
HHELNQFCSVHTLQEVYIELF
Sbjct: 121 HHELNQFCSVHTLQEVYIELF 141
>gi|225579095 S-phase cyclin A-associated protein in the ER isoform
b [Homo sapiens]
Length = 1154
Score = 41.2 bits (95), Expect = 0.001
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 181 RNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEK 240
+ YE +E + Q++K EA ERK+AL EAE+ A+V E+ +K E E+
Sbjct: 400 KEYEQRLNELQEERQRRQEEKQARDEAVQERKRAL-EAERQARVEELLMKRKEQEARIEQ 458
Query: 241 KISEIEDA-AFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAI 289
+ E E A ARE+A+ E A+ A+ ++ + +QL ++I
Sbjct: 459 QRQEKEKAREDAARERARDREERLAALTAAQQEAMEELQKKIQLKHDESI 508
>gi|225579092 S-phase cyclin A-associated protein in the ER isoform
a [Homo sapiens]
Length = 1400
Score = 41.2 bits (95), Expect = 0.001
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 181 RNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEK 240
+ YE +E + Q++K EA ERK+AL EAE+ A+V E+ +K E E+
Sbjct: 646 KEYEQRLNELQEERQRRQEEKQARDEAVQERKRAL-EAERQARVEELLMKRKEQEARIEQ 704
Query: 241 KISEIEDA-AFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAI 289
+ E E A ARE+A+ E A+ A+ ++ + +QL ++I
Sbjct: 705 QRQEKEKAREDAARERARDREERLAALTAAQQEAMEELQKKIQLKHDESI 754
>gi|7657615 podocin [Homo sapiens]
Length = 383
Score = 38.5 bits (88), Expect = 0.009
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 15 FCASLFSAVHKIEEGHIGVYYRGGALLTSTS-GPGFHLMLPFITSYKSVQTTLQTDEVKN 73
F S++ V ++E + +R G LL + GPG LP + +Y V LQT E+
Sbjct: 117 FPFSIWFCVKVVQEYERVIIFRLGHLLPGRAKGPGLFFFLPCLDTYHKVDLRLQTLEIPF 176
Query: 74 VPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTL 133
T ++ D I + + NA ++ + A KA+ F + + + + +L
Sbjct: 177 HEIVTKDMFIMEIDAI--CYYRMENA--SLLLSSLAHVSKAVQF-LVQTTMKRLLAHRSL 231
Query: 134 QEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKL 193
E+ +E I ++ K+AL D + G+ ++ + + +P ++ + +E+E
Sbjct: 232 TEILLER-KSIAQDAKVAL--DSVTCIWGIKVERIEIKDVRLPAGLQHSL-AVEAE---- 283
Query: 194 LIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYG 230
AQ+Q V A K A +E + AEI G
Sbjct: 284 ---AQRQAKVRMIAAEAEKAA---SESLRMAAEILSG 314
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 38.5 bits (88), Expect = 0.009
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 143 QIDENLK-LALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMES-----------EK 190
Q+++ L L LQ + T L+ + ++ K EA R+ ++ E K
Sbjct: 2183 QVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSK 2242
Query: 191 TKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAF 250
K I A+ + ++ ++ + ++ EAEK+ QVAE V +E + E+
Sbjct: 2243 LKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAEED-- 2300
Query: 251 LAREKAKADAECYTAMK-IAEANKLKLTPEYLQLMK 285
LA+++A A+ M+ + EA +LK E LQ K
Sbjct: 2301 LAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQK 2336
Score = 32.3 bits (72), Expect = 0.62
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 177 EAIRRNYELMESEKTKLLIAAQKQK--VVEKEAETERKKALIEAEKV-AQVAEITYGQKV 233
EA R+ E E+ + + QK E+EA +RK AL E E++ A+V E ++
Sbjct: 1968 EAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRER 2027
Query: 234 MEKETEKKISEIEDAA---FLAREKAKADA 260
E+E+ +++ ++AA A EKA A A
Sbjct: 2028 AEQESARQLQLAQEAAQKRLQAEEKAHAFA 2057
Score = 29.6 bits (65), Expect = 4.0
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 175 IPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVM 234
I E +RR ME E+ A++Q+ E+E E + AL EK Q+AE K
Sbjct: 1337 ISETLRR----MEEEER----LAEQQRAEERERLAEVEAAL---EKQRQLAEAHAQAKAQ 1385
Query: 235 EKETEKKISEIEDAAFLAREKAKADAE 261
+ K++ + + RE+A DA+
Sbjct: 1386 AEREAKELQQRMQEEVVRREEAAVDAQ 1412
Score = 29.6 bits (65), Expect = 4.0
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 177 EAIRRNYELMESEKTKL-LIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVME 235
EA RR E E + + AAQ ++ VE E ER K E + A+ +K +
Sbjct: 2084 EAARRAAEEAEEARVQAEREAAQSRRQVE---EAERLKQSAEEQAQARAQAQAAAEK-LR 2139
Query: 236 KETEKKISEIEDAAFLA-REKAKADAECYTAMKIAE 270
KE E++ + A A R+K ADAE K AE
Sbjct: 2140 KEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAE 2175
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 38.5 bits (88), Expect = 0.009
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 143 QIDENLK-LALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMES-----------EK 190
Q+++ L L LQ + T L+ + ++ K EA R+ ++ E K
Sbjct: 2187 QVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSK 2246
Query: 191 TKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAF 250
K I A+ + ++ ++ + ++ EAEK+ QVAE V +E + E+
Sbjct: 2247 LKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAEED-- 2304
Query: 251 LAREKAKADAECYTAMK-IAEANKLKLTPEYLQLMK 285
LA+++A A+ M+ + EA +LK E LQ K
Sbjct: 2305 LAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQK 2340
Score = 32.3 bits (72), Expect = 0.62
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 177 EAIRRNYELMESEKTKLLIAAQKQK--VVEKEAETERKKALIEAEKV-AQVAEITYGQKV 233
EA R+ E E+ + + QK E+EA +RK AL E E++ A+V E ++
Sbjct: 1972 EAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRER 2031
Query: 234 MEKETEKKISEIEDAA---FLAREKAKADA 260
E+E+ +++ ++AA A EKA A A
Sbjct: 2032 AEQESARQLQLAQEAAQKRLQAEEKAHAFA 2061
Score = 29.6 bits (65), Expect = 4.0
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 175 IPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVM 234
I E +RR ME E+ A++Q+ E+E E + AL EK Q+AE K
Sbjct: 1341 ISETLRR----MEEEER----LAEQQRAEERERLAEVEAAL---EKQRQLAEAHAQAKAQ 1389
Query: 235 EKETEKKISEIEDAAFLAREKAKADAE 261
+ K++ + + RE+A DA+
Sbjct: 1390 AEREAKELQQRMQEEVVRREEAAVDAQ 1416
Score = 29.6 bits (65), Expect = 4.0
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 177 EAIRRNYELMESEKTKL-LIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVME 235
EA RR E E + + AAQ ++ VE E ER K E + A+ +K +
Sbjct: 2088 EAARRAAEEAEEARVQAEREAAQSRRQVE---EAERLKQSAEEQAQARAQAQAAAEK-LR 2143
Query: 236 KETEKKISEIEDAAFLA-REKAKADAECYTAMKIAE 270
KE E++ + A A R+K ADAE K AE
Sbjct: 2144 KEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAE 2179
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 38.5 bits (88), Expect = 0.009
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 143 QIDENLK-LALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMES-----------EK 190
Q+++ L L LQ + T L+ + ++ K EA R+ ++ E K
Sbjct: 2183 QVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSK 2242
Query: 191 TKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAF 250
K I A+ + ++ ++ + ++ EAEK+ QVAE V +E + E+
Sbjct: 2243 LKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAEED-- 2300
Query: 251 LAREKAKADAECYTAMK-IAEANKLKLTPEYLQLMK 285
LA+++A A+ M+ + EA +LK E LQ K
Sbjct: 2301 LAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQK 2336
Score = 32.3 bits (72), Expect = 0.62
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 177 EAIRRNYELMESEKTKLLIAAQKQK--VVEKEAETERKKALIEAEKV-AQVAEITYGQKV 233
EA R+ E E+ + + QK E+EA +RK AL E E++ A+V E ++
Sbjct: 1968 EAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRER 2027
Query: 234 MEKETEKKISEIEDAA---FLAREKAKADA 260
E+E+ +++ ++AA A EKA A A
Sbjct: 2028 AEQESARQLQLAQEAAQKRLQAEEKAHAFA 2057
Score = 29.6 bits (65), Expect = 4.0
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 175 IPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVM 234
I E +RR ME E+ A++Q+ E+E E + AL EK Q+AE K
Sbjct: 1337 ISETLRR----MEEEER----LAEQQRAEERERLAEVEAAL---EKQRQLAEAHAQAKAQ 1385
Query: 235 EKETEKKISEIEDAAFLAREKAKADAE 261
+ K++ + + RE+A DA+
Sbjct: 1386 AEREAKELQQRMQEEVVRREEAAVDAQ 1412
Score = 29.6 bits (65), Expect = 4.0
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 177 EAIRRNYELMESEKTKL-LIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVME 235
EA RR E E + + AAQ ++ VE E ER K E + A+ +K +
Sbjct: 2084 EAARRAAEEAEEARVQAEREAAQSRRQVE---EAERLKQSAEEQAQARAQAQAAAEK-LR 2139
Query: 236 KETEKKISEIEDAAFLA-REKAKADAECYTAMKIAE 270
KE E++ + A A R+K ADAE K AE
Sbjct: 2140 KEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAE 2175
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 38.5 bits (88), Expect = 0.009
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 143 QIDENLK-LALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMES-----------EK 190
Q+++ L L LQ + T L+ + ++ K EA R+ ++ E K
Sbjct: 2151 QVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSK 2210
Query: 191 TKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAF 250
K I A+ + ++ ++ + ++ EAEK+ QVAE V +E + E+
Sbjct: 2211 LKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAEED-- 2268
Query: 251 LAREKAKADAECYTAMK-IAEANKLKLTPEYLQLMK 285
LA+++A A+ M+ + EA +LK E LQ K
Sbjct: 2269 LAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQK 2304
Score = 32.3 bits (72), Expect = 0.62
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 177 EAIRRNYELMESEKTKLLIAAQKQK--VVEKEAETERKKALIEAEKV-AQVAEITYGQKV 233
EA R+ E E+ + + QK E+EA +RK AL E E++ A+V E ++
Sbjct: 1936 EAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRER 1995
Query: 234 MEKETEKKISEIEDAA---FLAREKAKADA 260
E+E+ +++ ++AA A EKA A A
Sbjct: 1996 AEQESARQLQLAQEAAQKRLQAEEKAHAFA 2025
Score = 29.6 bits (65), Expect = 4.0
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 175 IPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVM 234
I E +RR ME E+ A++Q+ E+E E + AL EK Q+AE K
Sbjct: 1305 ISETLRR----MEEEER----LAEQQRAEERERLAEVEAAL---EKQRQLAEAHAQAKAQ 1353
Query: 235 EKETEKKISEIEDAAFLAREKAKADAE 261
+ K++ + + RE+A DA+
Sbjct: 1354 AEREAKELQQRMQEEVVRREEAAVDAQ 1380
Score = 29.6 bits (65), Expect = 4.0
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 177 EAIRRNYELMESEKTKL-LIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVME 235
EA RR E E + + AAQ ++ VE E ER K E + A+ +K +
Sbjct: 2052 EAARRAAEEAEEARVQAEREAAQSRRQVE---EAERLKQSAEEQAQARAQAQAAAEK-LR 2107
Query: 236 KETEKKISEIEDAAFLA-REKAKADAECYTAMKIAE 270
KE E++ + A A R+K ADAE K AE
Sbjct: 2108 KEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAE 2143
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 38.5 bits (88), Expect = 0.009
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 143 QIDENLK-LALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMES-----------EK 190
Q+++ L L LQ + T L+ + ++ K EA R+ ++ E K
Sbjct: 2320 QVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSK 2379
Query: 191 TKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAF 250
K I A+ + ++ ++ + ++ EAEK+ QVAE V +E + E+
Sbjct: 2380 LKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAEED-- 2437
Query: 251 LAREKAKADAECYTAMK-IAEANKLKLTPEYLQLMK 285
LA+++A A+ M+ + EA +LK E LQ K
Sbjct: 2438 LAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQK 2473
Score = 32.3 bits (72), Expect = 0.62
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 177 EAIRRNYELMESEKTKLLIAAQKQK--VVEKEAETERKKALIEAEKV-AQVAEITYGQKV 233
EA R+ E E+ + + QK E+EA +RK AL E E++ A+V E ++
Sbjct: 2105 EAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRER 2164
Query: 234 MEKETEKKISEIEDAA---FLAREKAKADA 260
E+E+ +++ ++AA A EKA A A
Sbjct: 2165 AEQESARQLQLAQEAAQKRLQAEEKAHAFA 2194
Score = 29.6 bits (65), Expect = 4.0
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 175 IPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVM 234
I E +RR ME E+ A++Q+ E+E E + AL EK Q+AE K
Sbjct: 1474 ISETLRR----MEEEER----LAEQQRAEERERLAEVEAAL---EKQRQLAEAHAQAKAQ 1522
Query: 235 EKETEKKISEIEDAAFLAREKAKADAE 261
+ K++ + + RE+A DA+
Sbjct: 1523 AEREAKELQQRMQEEVVRREEAAVDAQ 1549
Score = 29.6 bits (65), Expect = 4.0
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 177 EAIRRNYELMESEKTKL-LIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVME 235
EA RR E E + + AAQ ++ VE E ER K E + A+ +K +
Sbjct: 2221 EAARRAAEEAEEARVQAEREAAQSRRQVE---EAERLKQSAEEQAQARAQAQAAAEK-LR 2276
Query: 236 KETEKKISEIEDAAFLA-REKAKADAECYTAMKIAE 270
KE E++ + A A R+K ADAE K AE
Sbjct: 2277 KEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAE 2312
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 38.5 bits (88), Expect = 0.009
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 143 QIDENLK-LALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMES-----------EK 190
Q+++ L L LQ + T L+ + ++ K EA R+ ++ E K
Sbjct: 2161 QVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSK 2220
Query: 191 TKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAF 250
K I A+ + ++ ++ + ++ EAEK+ QVAE V +E + E+
Sbjct: 2221 LKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAEED-- 2278
Query: 251 LAREKAKADAECYTAMK-IAEANKLKLTPEYLQLMK 285
LA+++A A+ M+ + EA +LK E LQ K
Sbjct: 2279 LAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQK 2314
Score = 32.3 bits (72), Expect = 0.62
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 177 EAIRRNYELMESEKTKLLIAAQKQK--VVEKEAETERKKALIEAEKV-AQVAEITYGQKV 233
EA R+ E E+ + + QK E+EA +RK AL E E++ A+V E ++
Sbjct: 1946 EAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRER 2005
Query: 234 MEKETEKKISEIEDAA---FLAREKAKADA 260
E+E+ +++ ++AA A EKA A A
Sbjct: 2006 AEQESARQLQLAQEAAQKRLQAEEKAHAFA 2035
Score = 29.6 bits (65), Expect = 4.0
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 175 IPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVM 234
I E +RR ME E+ A++Q+ E+E E + AL EK Q+AE K
Sbjct: 1315 ISETLRR----MEEEER----LAEQQRAEERERLAEVEAAL---EKQRQLAEAHAQAKAQ 1363
Query: 235 EKETEKKISEIEDAAFLAREKAKADAE 261
+ K++ + + RE+A DA+
Sbjct: 1364 AEREAKELQQRMQEEVVRREEAAVDAQ 1390
Score = 29.6 bits (65), Expect = 4.0
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 177 EAIRRNYELMESEKTKL-LIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVME 235
EA RR E E + + AAQ ++ VE E ER K E + A+ +K +
Sbjct: 2062 EAARRAAEEAEEARVQAEREAAQSRRQVE---EAERLKQSAEEQAQARAQAQAAAEK-LR 2117
Query: 236 KETEKKISEIEDAAFLA-REKAKADAECYTAMKIAE 270
KE E++ + A A R+K ADAE K AE
Sbjct: 2118 KEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAE 2153
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 38.5 bits (88), Expect = 0.009
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 143 QIDENLK-LALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMES-----------EK 190
Q+++ L L LQ + T L+ + ++ K EA R+ ++ E K
Sbjct: 2169 QVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSK 2228
Query: 191 TKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAF 250
K I A+ + ++ ++ + ++ EAEK+ QVAE V +E + E+
Sbjct: 2229 LKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAEED-- 2286
Query: 251 LAREKAKADAECYTAMK-IAEANKLKLTPEYLQLMK 285
LA+++A A+ M+ + EA +LK E LQ K
Sbjct: 2287 LAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQK 2322
Score = 32.3 bits (72), Expect = 0.62
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 177 EAIRRNYELMESEKTKLLIAAQKQK--VVEKEAETERKKALIEAEKV-AQVAEITYGQKV 233
EA R+ E E+ + + QK E+EA +RK AL E E++ A+V E ++
Sbjct: 1954 EAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRER 2013
Query: 234 MEKETEKKISEIEDAA---FLAREKAKADA 260
E+E+ +++ ++AA A EKA A A
Sbjct: 2014 AEQESARQLQLAQEAAQKRLQAEEKAHAFA 2043
Score = 29.6 bits (65), Expect = 4.0
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 175 IPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVM 234
I E +RR ME E+ A++Q+ E+E E + AL EK Q+AE K
Sbjct: 1323 ISETLRR----MEEEER----LAEQQRAEERERLAEVEAAL---EKQRQLAEAHAQAKAQ 1371
Query: 235 EKETEKKISEIEDAAFLAREKAKADAE 261
+ K++ + + RE+A DA+
Sbjct: 1372 AEREAKELQQRMQEEVVRREEAAVDAQ 1398
Score = 29.6 bits (65), Expect = 4.0
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 177 EAIRRNYELMESEKTKL-LIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVME 235
EA RR E E + + AAQ ++ VE E ER K E + A+ +K +
Sbjct: 2070 EAARRAAEEAEEARVQAEREAAQSRRQVE---EAERLKQSAEEQAQARAQAQAAAEK-LR 2125
Query: 236 KETEKKISEIEDAAFLA-REKAKADAECYTAMKIAE 270
KE E++ + A A R+K ADAE K AE
Sbjct: 2126 KEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAE 2161
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 38.5 bits (88), Expect = 0.009
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 143 QIDENLK-LALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMES-----------EK 190
Q+++ L L LQ + T L+ + ++ K EA R+ ++ E K
Sbjct: 2210 QVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSK 2269
Query: 191 TKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAF 250
K I A+ + ++ ++ + ++ EAEK+ QVAE V +E + E+
Sbjct: 2270 LKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAEED-- 2327
Query: 251 LAREKAKADAECYTAMK-IAEANKLKLTPEYLQLMK 285
LA+++A A+ M+ + EA +LK E LQ K
Sbjct: 2328 LAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQK 2363
Score = 32.3 bits (72), Expect = 0.62
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 177 EAIRRNYELMESEKTKLLIAAQKQK--VVEKEAETERKKALIEAEKV-AQVAEITYGQKV 233
EA R+ E E+ + + QK E+EA +RK AL E E++ A+V E ++
Sbjct: 1995 EAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRER 2054
Query: 234 MEKETEKKISEIEDAA---FLAREKAKADA 260
E+E+ +++ ++AA A EKA A A
Sbjct: 2055 AEQESARQLQLAQEAAQKRLQAEEKAHAFA 2084
Score = 29.6 bits (65), Expect = 4.0
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 175 IPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVM 234
I E +RR ME E+ A++Q+ E+E E + AL EK Q+AE K
Sbjct: 1364 ISETLRR----MEEEER----LAEQQRAEERERLAEVEAAL---EKQRQLAEAHAQAKAQ 1412
Query: 235 EKETEKKISEIEDAAFLAREKAKADAE 261
+ K++ + + RE+A DA+
Sbjct: 1413 AEREAKELQQRMQEEVVRREEAAVDAQ 1439
Score = 29.6 bits (65), Expect = 4.0
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 177 EAIRRNYELMESEKTKL-LIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVME 235
EA RR E E + + AAQ ++ VE E ER K E + A+ +K +
Sbjct: 2111 EAARRAAEEAEEARVQAEREAAQSRRQVE---EAERLKQSAEEQAQARAQAQAAAEK-LR 2166
Query: 236 KETEKKISEIEDAAFLA-REKAKADAECYTAMKIAE 270
KE E++ + A A R+K ADAE K AE
Sbjct: 2167 KEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAE 2202
>gi|94538362 flotillin 2 [Homo sapiens]
Length = 428
Score = 37.7 bits (86), Expect = 0.015
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 177 EAIRRNYELMESEKTKLLIAAQKQKVVEKEAE---TERKKALIEAEKVAQVAEITYGQKV 233
+ IR+ +E + K IA + Q+++ + E T R+ A EA ++ Q+AE G+KV
Sbjct: 250 QKIRQEEIEIEVVQRKKQIAVEAQEILRTDKELIATVRRPAEAEAHRIQQIAE---GEKV 306
Query: 234 MEKETEKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQ 282
K++ + A R+ +A+A AM AEA ++KL E Q
Sbjct: 307 ------KQVLLAQAEAEKIRKIGEAEAAVIEAMGKAEAERMKLKAEAYQ 349
>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 37.0 bits (84), Expect = 0.025
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 177 EAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEK 236
E IR E+M+ ++ KL +K + E++ + + +K + EK+ + E T+ Q+ + K
Sbjct: 434 EKIRELEEMMQDQEEKLREVEEKMQEEEEKMQEQEEKIQRQEEKIQEQEEKTWRQEKLLK 493
Query: 237 ETEKKISEIEDAAFLAREK 255
+ E+KI E E+ + EK
Sbjct: 494 Q-EEKIWEQEEKMWRQEEK 511
Score = 33.9 bits (76), Expect = 0.21
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 177 EAIRRNYELMESEKTKLL-----IAAQKQKVVEKEAETERKKALI-EAEKVAQVAEITYG 230
E +R E M+ E+ K+ I Q++K+ E+E +T R++ L+ + EK+ + E +
Sbjct: 448 EKLREVEEKMQEEEEKMQEQEEKIQRQEEKIQEQEEKTWRQEKLLKQEEKIWEQEEKMWR 507
Query: 231 QKVMEKETEKKISEIEDAAFLAREKAK 257
Q+ E E+K+ E E+ EK +
Sbjct: 508 QEEKMWEQEEKMQEQEEKMQRQEEKMR 534
Score = 29.3 bits (64), Expect = 5.3
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 175 IPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVM 234
I E + E M ++ K+ Q +K+ E+E E R++ EK+ ++ E+ Q+
Sbjct: 397 IREQEEKRQEKMWRQEKKM--REQDEKIREQEEEMWRQE-----EKIRELEEMMQDQEEK 449
Query: 235 EKETEKKISEIEDAAFLAREKAKADAE 261
+E E+K+ E E+ EK + E
Sbjct: 450 LREVEEKMQEEEEKMQEQEEKIQRQEE 476
Score = 28.9 bits (63), Expect = 6.9
Identities = 19/85 (22%), Positives = 41/85 (48%)
Query: 177 EAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEK 236
E + R E ++ ++ K+ K + E++ + +K + EK+ + + + Q+ +
Sbjct: 297 EKMWRQEEKIQEQEEKMCEQELKIREQEEKMWRQEEKMHEQEEKIREQEDKMWRQEEKIR 356
Query: 237 ETEKKISEIEDAAFLAREKAKADAE 261
E E+KI E E+ + EK + E
Sbjct: 357 EQEEKIREQEEKMWRQEEKIREQDE 381
>gi|239745127 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 37.0 bits (84), Expect = 0.025
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 177 EAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEK 236
E IR E+M+ ++ KL +K + E++ + + +K + EK+ + E T+ Q+ + K
Sbjct: 434 EKIRELEEMMQDQEEKLREVEEKMQEEEEKMQEQEEKIQRQEEKIQEQEEKTWRQEKLLK 493
Query: 237 ETEKKISEIEDAAFLAREK 255
+ E+KI E E+ + EK
Sbjct: 494 Q-EEKIWEQEEKMWRQEEK 511
Score = 33.9 bits (76), Expect = 0.21
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 177 EAIRRNYELMESEKTKLL-----IAAQKQKVVEKEAETERKKALI-EAEKVAQVAEITYG 230
E +R E M+ E+ K+ I Q++K+ E+E +T R++ L+ + EK+ + E +
Sbjct: 448 EKLREVEEKMQEEEEKMQEQEEKIQRQEEKIQEQEEKTWRQEKLLKQEEKIWEQEEKMWR 507
Query: 231 QKVMEKETEKKISEIEDAAFLAREKAK 257
Q+ E E+K+ E E+ EK +
Sbjct: 508 QEEKMWEQEEKMQEQEEKMQRQEEKMR 534
Score = 29.3 bits (64), Expect = 5.3
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 175 IPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVM 234
I E + E M ++ K+ Q +K+ E+E E R++ EK+ ++ E+ Q+
Sbjct: 397 IREQEEKRQEKMWRQEKKM--REQDEKIREQEEEMWRQE-----EKIRELEEMMQDQEEK 449
Query: 235 EKETEKKISEIEDAAFLAREKAKADAE 261
+E E+K+ E E+ EK + E
Sbjct: 450 LREVEEKMQEEEEKMQEQEEKIQRQEE 476
Score = 28.9 bits (63), Expect = 6.9
Identities = 19/85 (22%), Positives = 41/85 (48%)
Query: 177 EAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEK 236
E + R E ++ ++ K+ K + E++ + +K + EK+ + + + Q+ +
Sbjct: 297 EKMWRQEEKIQEQEEKMCEQELKIREQEEKMWRQEEKMHEQEEKIREQEDKMWRQEEKIR 356
Query: 237 ETEKKISEIEDAAFLAREKAKADAE 261
E E+KI E E+ + EK + E
Sbjct: 357 EQEEKIREQEEKMWRQEEKIREQDE 381
>gi|4505257 moesin [Homo sapiens]
Length = 577
Score = 37.0 bits (84), Expect = 0.025
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 185 LMESEKTKLLIAAQKQKVVEKEAET--ERKKALIEAEKVAQVAEITYGQKVMEKETEKKI 242
++E+EK K +A ++++ +E+E E ER K + E K AQ ++ +E E E+K
Sbjct: 322 MLENEKKKREMAEKEKEKIEREKEELMERLKQIEEQTKKAQQELEEQTRRALELEQERKR 381
Query: 243 SEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKI 295
++ E A LA+E+ +A+ E A+ A ++ K T E L L + A S++
Sbjct: 382 AQSE-AEKLAKERQEAE-EAKEALLQASRDQ-KKTQEQLALEMAELTARISQL 431
>gi|19913410 major vault protein [Homo sapiens]
Length = 893
Score = 36.6 bits (83), Expect = 0.033
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 133 LQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTK 192
+ V ++ + +D+ + ALQ+ V A+ +T + A + + +E E
Sbjct: 635 VSSVDVQSVEPVDQRTRDALQRS--------VQLAIEITTNSQEAAAKHEAQRLEQEARG 686
Query: 193 LLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLA 252
L ++QK++++ + +K L+E E ++ E T G E E+ + + IE +
Sbjct: 687 RL---ERQKILDQSEAEKARKELLELEALSMAVEST-GTAKAEAESRAEAARIEGEGSVL 742
Query: 253 REKAKADA 260
+ K KA A
Sbjct: 743 QAKLKAQA 750
>gi|19913412 major vault protein [Homo sapiens]
Length = 893
Score = 36.6 bits (83), Expect = 0.033
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 133 LQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTK 192
+ V ++ + +D+ + ALQ+ V A+ +T + A + + +E E
Sbjct: 635 VSSVDVQSVEPVDQRTRDALQRS--------VQLAIEITTNSQEAAAKHEAQRLEQEARG 686
Query: 193 LLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLA 252
L ++QK++++ + +K L+E E ++ E T G E E+ + + IE +
Sbjct: 687 RL---ERQKILDQSEAEKARKELLELEALSMAVEST-GTAKAEAESRAEAARIEGEGSVL 742
Query: 253 REKAKADA 260
+ K KA A
Sbjct: 743 QAKLKAQA 750
>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
Length = 495
Score = 36.2 bits (82), Expect = 0.043
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 15/132 (11%)
Query: 177 EAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAE---ITYGQKV 233
E + +E ++ EK + + ++ + +E E + K A + E+ AQ+AE I Y Q
Sbjct: 96 ELAKLKHESLKDEKMRQQV--RENSIELRELEKKLKAAYMNKERAAQIAEKDAIKYEQMK 153
Query: 234 MEKET-------EKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKY 286
+ E K+I + E+AA R KAKA ++ E K K Y QL+K
Sbjct: 154 RDAEIAKTMMEEHKRIIKEENAAEDKRNKAKAQYYLDLEKQLEEQEK-KKQEAYEQLLKE 212
Query: 287 KAIASN--SKIY 296
K + KIY
Sbjct: 213 KLMIDEIVRKIY 224
>gi|94536782 tripartite motif-containing 35 isoform 2 [Homo sapiens]
Length = 493
Score = 36.2 bits (82), Expect = 0.043
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 187 ESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEI- 245
E +K + + ++Q +++ AE R+K L+ EK+ Q+ E T +V+ E E+ E+
Sbjct: 190 EFDKLREFLRVEEQAILDAMAEETRQKQLLADEKMKQLTEET---EVLAHEIERLQMEMK 246
Query: 246 -EDAAFLAREKA-KADAECYTAMKIAEANKLKLTPEYLQLMKY----KAIASNSKIYFGK 299
+D +FL + K+ K C + + L +YL ++Y K +AS + F
Sbjct: 247 EDDVSFLMKHKSRKRRLFCTMEPEPVQPGMLIDVCKYLGSLQYRVWKKMLASVESVPFSF 306
Query: 300 DIPN 303
D PN
Sbjct: 307 D-PN 309
>gi|5031699 flotillin 1 [Homo sapiens]
Length = 427
Score = 35.8 bits (81), Expect = 0.056
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 180 RRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKV-AQVAEITYGQKVMEKET 238
+R+YEL ++ + + Q + + + + K IE ++V QV E V E+E
Sbjct: 213 QRDYELKKAAYDIEVNTRRAQADLAYQLQVAKTKQQIEEQRVQVQVVERAQQVAVQEQEI 272
Query: 239 EKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKL 276
++ E+E AR + A+AE Y ++AEA K +L
Sbjct: 273 ARREKELE-----ARVRKPAEAERYKLERLAEAEKSQL 305
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 35.8 bits (81), Expect = 0.056
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 144 IDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVV 203
IDE ++ A ++M P + P PE + + YE EKTKL + + +K +
Sbjct: 470 IDEVVRKAKLGTPSNMPPNFPYISSPSVSPPTPEPLHKVYE----EKTKLPSSVEVKKKL 525
Query: 204 EKEAETERKKALI----EAEKVAQVAEITYGQKVMEKETEKK 241
+KE +T+ KK E EK + KV EKE +K+
Sbjct: 526 KKELKTKMKKKEKQRDREREKDKNKDKSKEKDKVKEKEKDKE 567
Score = 28.5 bits (62), Expect = 9.0
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 22/154 (14%)
Query: 153 QQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLL---IAAQKQKVVEKEAET 209
+ + + AP LV+ + P A M +L + +K+KV EKE +
Sbjct: 644 EDKMKAPAPPLVLPPKELALPLFSPATASRVPAMLPSLLPVLPEKLFEEKEKVKEKEKKK 703
Query: 210 ERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREKAKADAECYTAMKIA 269
++K+ +K EKE EKK E E REK + + E + KI
Sbjct: 704 DKKEK----------------KKKKEKEKEKKEKEREKEK-REREKREKEKEKHKHEKI- 745
Query: 270 EANKLKLTPE-YLQLMKYKAIASNSKIYFGKDIP 302
+ + L P + + + A KI K +P
Sbjct: 746 KVEPVALAPSPVIPRLTLRVGAGQDKIVISKVVP 779
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 35.4 bits (80), Expect = 0.073
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 19/137 (13%)
Query: 126 QFCSVHT--LQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTK-PNIPEAIRRN 182
QF +V T +E++ + F Q +N L P V+ K N +RRN
Sbjct: 435 QFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRN 494
Query: 183 YELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKI 242
Y ++ +Q++KV EKE + +AEK + E EK+ E++
Sbjct: 495 YGKRRGRNQQIARPSQEEKVEEKEED--------KAEKTEKKEE--------EKKDEEEK 538
Query: 243 SEIEDAAFLAREKAKAD 259
E ED+ +EK K D
Sbjct: 539 DEKEDSKENTKEKDKID 555
>gi|70166430 GRINL1A combined protein isoform 2 [Homo sapiens]
Length = 445
Score = 35.4 bits (80), Expect = 0.073
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 130 VHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESE 189
+ LQ+ Y D++ E + Q ++ + L+ V ++ E +R + + S+
Sbjct: 192 IRNLQQTYEASMDKLREKQR---QLEVAQVENQLLKMKVESSQEANAEVMREMTKKLYSQ 248
Query: 190 KTKLLIAAQKQKVVEKEAETERK----KALIEAEKVAQVAEITYGQK------------V 233
+ L Q++ EKEA E KA+ EA K Q AEI+ +K
Sbjct: 249 YEEKLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIER 308
Query: 234 MEKETEK-KISEIEDAAFLAREKAKADAECYTAMKIAEAN 272
MEKE + ++ +E ++ E +D E Y ++ A A+
Sbjct: 309 MEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASAS 348
>gi|70166414 GRINL1A combined protein isoform 1 [Homo sapiens]
Length = 550
Score = 35.4 bits (80), Expect = 0.073
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 130 VHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESE 189
+ LQ+ Y D++ E + Q ++ + L+ V ++ E +R + + S+
Sbjct: 192 IRNLQQTYEASMDKLREKQR---QLEVAQVENQLLKMKVESSQEANAEVMREMTKKLYSQ 248
Query: 190 KTKLLIAAQKQKVVEKEAETERK----KALIEAEKVAQVAEITYGQK------------V 233
+ L Q++ EKEA E KA+ EA K Q AEI+ +K
Sbjct: 249 YEEKLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIER 308
Query: 234 MEKETEK-KISEIEDAAFLAREKAKADAECYTAMKIAEAN 272
MEKE + ++ +E ++ E +D E Y ++ A A+
Sbjct: 309 MEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASAS 348
>gi|111494235 GRINL1A combined protein isoform 8 [Homo sapiens]
Length = 438
Score = 35.4 bits (80), Expect = 0.073
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 130 VHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESE 189
+ LQ+ Y D++ E + Q ++ + L+ V ++ E +R + + S+
Sbjct: 192 IRNLQQTYEASMDKLREKQR---QLEVAQVENQLLKMKVESSQEANAEVMREMTKKLYSQ 248
Query: 190 KTKLLIAAQKQKVVEKEAETERK----KALIEAEKVAQVAEITYGQK------------V 233
+ L Q++ EKEA E KA+ EA K Q AEI+ +K
Sbjct: 249 YEEKLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIER 308
Query: 234 MEKETEK-KISEIEDAAFLAREKAKADAECYTAMKIAEAN 272
MEKE + ++ +E ++ E +D E Y ++ A A+
Sbjct: 309 MEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASAS 348
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,740,991
Number of Sequences: 37866
Number of extensions: 426768
Number of successful extensions: 2698
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 174
Number of HSP's that attempted gapping in prelim test: 2231
Number of HSP's gapped (non-prelim): 609
length of query: 339
length of database: 18,247,518
effective HSP length: 103
effective length of query: 236
effective length of database: 14,347,320
effective search space: 3385967520
effective search space used: 3385967520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.