Guide to the Human Genome
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Search of human proteins with 59859878

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|59859878 baculoviral IAP repeat-containing protein 5 isoform
1 [Homo sapiens]
         (142 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|59859878 baculoviral IAP repeat-containing protein 5 isoform ...   304   2e-83
gi|59859882 baculoviral IAP repeat-containing protein 5 isoform ...   291   2e-79
gi|59859880 baculoviral IAP repeat-containing protein 5 isoform ...   172   8e-44
gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]        66   8e-12
gi|119393878 NLR family, apoptosis inhibitory protein isoform 1 ...    62   2e-10
gi|11545910 livin inhibitor of apoptosis isoform beta [Homo sapi...    55   1e-08
gi|21536421 livin inhibitor of apoptosis isoform alpha [Homo sap...    55   1e-08
gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sap...    52   1e-07
gi|44680139 baculoviral IAP repeat-containing 8 [Homo sapiens]         52   2e-07
gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo sa...    51   3e-07
gi|119393876 NLR family, apoptosis inhibitory protein isoform 2 ...    51   4e-07
gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sa...    49   1e-06
gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sap...    49   1e-06
gi|215982794 myosin VA isoform 2 [Homo sapiens]                        31   0.39 
gi|215982791 myosin VA isoform 1 [Homo sapiens]                        31   0.39 
gi|143770880 laminin, beta 4 [Homo sapiens]                            30   0.88 
gi|4503945 glucagon preproprotein [Homo sapiens]                       29   1.1  
gi|16418355 cAMP responsive element binding protein 3-like 1 [Ho...    29   1.5  
gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens]     28   2.0  
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap...    28   2.0  
gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C...    28   2.0  
gi|56550067 cAMP responsive element binding protein 3-like 2 [Ho...    28   2.0  
gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi...    28   2.0  
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi...    28   2.0  
gi|37577287 syntaxin 2 isoform 1 [Homo sapiens]                        28   3.3  
gi|37577162 syntaxin 2 isoform 2 [Homo sapiens]                        28   3.3  
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]         28   3.3  
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]         28   3.3  
gi|4826894 phosphodiesterase 1C [Homo sapiens]                         27   4.4  
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     27   4.4  

>gi|59859878 baculoviral IAP repeat-containing protein 5 isoform 1
           [Homo sapiens]
          Length = 142

 Score =  304 bits (778), Expect = 2e-83
 Identities = 142/142 (100%), Positives = 142/142 (100%)

Query: 1   MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 60
           MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC
Sbjct: 1   MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 60

Query: 61  FKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNK 120
           FKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNK
Sbjct: 61  FKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNK 120

Query: 121 KKEFEETAEKVRRAIEQLAAMD 142
           KKEFEETAEKVRRAIEQLAAMD
Sbjct: 121 KKEFEETAEKVRRAIEQLAAMD 142


>gi|59859882 baculoviral IAP repeat-containing protein 5 isoform 3
           [Homo sapiens]
          Length = 165

 Score =  291 bits (744), Expect = 2e-79
 Identities = 142/165 (86%), Positives = 142/165 (86%), Gaps = 23/165 (13%)

Query: 1   MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 60
           MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC
Sbjct: 1   MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 60

Query: 61  FKELEGWEPDDDPI-----------------------EEHKKHSSGCAFLSVKKQFEELT 97
           FKELEGWEPDDDPI                       EEHKKHSSGCAFLSVKKQFEELT
Sbjct: 61  FKELEGWEPDDDPIGPGTVAYACNTSTLGGRGGRITREEHKKHSSGCAFLSVKKQFEELT 120

Query: 98  LGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVRRAIEQLAAMD 142
           LGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVRRAIEQLAAMD
Sbjct: 121 LGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVRRAIEQLAAMD 165


>gi|59859880 baculoviral IAP repeat-containing protein 5 isoform 2
          [Homo sapiens]
          Length = 137

 Score =  172 bits (436), Expect = 8e-44
 Identities = 73/75 (97%), Positives = 75/75 (100%)

Query: 1  MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 60
          MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC
Sbjct: 1  MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 60

Query: 61 FKELEGWEPDDDPIE 75
          FKELEGWEPDDDP++
Sbjct: 61 FKELEGWEPDDDPMQ 75


>gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]
          Length = 4857

 Score = 66.2 bits (160), Expect = 8e-12
 Identities = 30/71 (42%), Positives = 40/71 (56%)

Query: 17  HRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEE 76
           +R  TF +WP +      P+ MA+AGF H P  +  D A CF C   L  WEP D+P  E
Sbjct: 288 NRRETFTSWPHVGYRWAQPDPMAQAGFYHQPASSGDDRAMCFTCSVCLVCWEPTDEPWSE 347

Query: 77  HKKHSSGCAFL 87
           H++HS  C F+
Sbjct: 348 HERHSPNCPFV 358


>gi|119393878 NLR family, apoptosis inhibitory protein isoform 1
           [Homo sapiens]
          Length = 1403

 Score = 62.0 bits (149), Expect = 2e-10
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 6/84 (7%)

Query: 15  KDHRISTFKNWPF-LEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDP 73
           ++ R+++F+NWPF ++G +  P  ++EAGF+      + D  QCF C   L  WE  DDP
Sbjct: 159 EEARLASFRNWPFYVQGIS--PCVLSEAGFVFT---GKQDTVQCFSCGGCLGNWEEGDDP 213

Query: 74  IEEHKKHSSGCAFLSVKKQFEELT 97
            +EH K    C FL  KK  EE+T
Sbjct: 214 WKEHAKWFPKCEFLRSKKSSEEIT 237



 Score = 50.8 bits (120), Expect = 4e-07
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 5/80 (6%)

Query: 18  RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEH 77
           R+ +FK+WP     A     +A+AG  +   +   D+ QCF C   LE W+  DDP+++H
Sbjct: 281 RLDSFKDWP--RESAVGVAALAKAGLFYTGIK---DIVQCFSCGGCLEKWQEGDDPLDDH 335

Query: 78  KKHSSGCAFLSVKKQFEELT 97
            +    C FL   K   E+T
Sbjct: 336 TRCFPNCPFLQNMKSSAEVT 355



 Score = 35.4 bits (80), Expect = 0.016
 Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 10/94 (10%)

Query: 35  PERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFE 94
           P+ MA AGF     ++     QCF C   L G      PIE+HK+    C FL  K    
Sbjct: 78  PQEMAAAGFYFTGVKSG---IQCFCCSLILFGAGLTRLPIEDHKRFHPDCGFLLNK---- 130

Query: 95  ELTLGEFLKLDRERAKNKIAKETNNKKKEFEETA 128
              +G   K D  R KN  ++    K +  EE A
Sbjct: 131 --DVGNIAKYD-IRVKNLKSRLRGGKMRYQEEEA 161


>gi|11545910 livin inhibitor of apoptosis isoform beta [Homo
           sapiens]
          Length = 280

 Score = 55.5 bits (132), Expect = 1e-08
 Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 5/70 (7%)

Query: 18  RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEH 77
           R+++F +WP        PE +A AGF H       D  +CFFC+  L+ W+  DDP  EH
Sbjct: 90  RLASFYDWPLT--AEVPPELLAAAGFFHT---GHQDKVRCFFCYGGLQSWKRGDDPWTEH 144

Query: 78  KKHSSGCAFL 87
            K    C FL
Sbjct: 145 AKWFPSCQFL 154


>gi|21536421 livin inhibitor of apoptosis isoform alpha [Homo
           sapiens]
          Length = 298

 Score = 55.5 bits (132), Expect = 1e-08
 Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 5/70 (7%)

Query: 18  RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEH 77
           R+++F +WP        PE +A AGF H       D  +CFFC+  L+ W+  DDP  EH
Sbjct: 90  RLASFYDWPLT--AEVPPELLAAAGFFHT---GHQDKVRCFFCYGGLQSWKRGDDPWTEH 144

Query: 78  KKHSSGCAFL 87
            K    C FL
Sbjct: 145 AKWFPSCQFL 154


>gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo
           sapiens]
          Length = 618

 Score = 52.4 bits (124), Expect = 1e-07
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 6/83 (7%)

Query: 5   TLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKEL 64
           T P ++    ++ R  T+  WP       +P  +A AGF +       D   CF C  +L
Sbjct: 174 TNPYSYAMSTEEARFLTYHMWPLT---FLSPSELARAGFYYI---GPGDRVACFACGGKL 227

Query: 65  EGWEPDDDPIEEHKKHSSGCAFL 87
             WEP DD + EH++H   C FL
Sbjct: 228 SNWEPKDDAMSEHRRHFPNCPFL 250



 Score = 46.2 bits (108), Expect = 9e-06
 Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 18  RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEH 77
           R+ TF  WP        PE++A AGF +    ++    +CF C   L  WE  DDP  EH
Sbjct: 272 RMRTFMYWP--SSVPVQPEQLASAGFYYVGRNDD---VKCFCCDGGLRCWESGDDPWVEH 326

Query: 78  KKHSSGCAFL 87
            K    C FL
Sbjct: 327 AKWFPRCEFL 336



 Score = 43.9 bits (102), Expect = 5e-05
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 5/71 (7%)

Query: 17  HRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEE 76
           +R+ST+  +P   G   +   +A AGF +       D  +CF C   L+ W+  D PI++
Sbjct: 48  YRMSTYSTFP--AGVPVSERSLARAGFYYTGVN---DKVKCFCCGLMLDNWKLGDSPIQK 102

Query: 77  HKKHSSGCAFL 87
           HK+    C+F+
Sbjct: 103 HKQLYPSCSFI 113


>gi|44680139 baculoviral IAP repeat-containing 8 [Homo sapiens]
          Length = 236

 Score = 52.0 bits (123), Expect = 2e-07
 Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 8/110 (7%)

Query: 18  RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEH 77
           R+ TF  W +    +   E++A AGF     E   D  QCF C   L  W+P +DP E+H
Sbjct: 7   RLITFGTWMY----SVNKEQLARAGFYAIGQE---DKVQCFHCGGGLANWKPKEDPWEQH 59

Query: 78  KKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNKKKEFEET 127
            K   GC +L  +K  E +     L    E A  +  K+T +  K   +T
Sbjct: 60  AKWYPGCKYLLEEKGHEYIN-NIHLTRSLEGALVQTTKKTPSLTKRISDT 108


>gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo
           sapiens]
          Length = 497

 Score = 51.2 bits (121), Expect = 3e-07
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 13  FLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDD 72
           + ++ R+ +F+NWP  +    TP  +A AG  +       D  QCF C  +L+ WEP D 
Sbjct: 161 YSEEARLKSFQNWP--DYAHLTPRELASAGLYYTGIG---DQVQCFCCGGKLKNWEPCDR 215

Query: 73  PIEEHKKHSSGCAFL 87
              EH++H   C F+
Sbjct: 216 AWSEHRRHFPNCFFV 230



 Score = 49.3 bits (116), Expect = 1e-06
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 9/82 (10%)

Query: 12  PFLKDH--RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEP 69
           P + D+  RI TF  W +    +   E++A AGF       E D  +CF C   L  W+P
Sbjct: 260 PSMADYEARIFTFGTWIY----SVNKEQLARAGFYAL---GEGDKVKCFHCGGGLTDWKP 312

Query: 70  DDDPIEEHKKHSSGCAFLSVKK 91
            +DP E+H K   GC +L  +K
Sbjct: 313 SEDPWEQHAKWYPGCKYLLEQK 334



 Score = 46.2 bits (108), Expect = 9e-06
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 5/72 (6%)

Query: 17 HRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEE 76
          +R+ TF N+P   G   +   +A AGF++     E D  +CF C   ++ W+  D  +  
Sbjct: 28 NRLKTFANFP--SGSPVSASTLARAGFLYT---GEGDTVRCFSCHAAVDRWQYGDSAVGR 82

Query: 77 HKKHSSGCAFLS 88
          H+K S  C F++
Sbjct: 83 HRKVSPNCRFIN 94


>gi|119393876 NLR family, apoptosis inhibitory protein isoform 2
           [Homo sapiens]
          Length = 1241

 Score = 50.8 bits (120), Expect = 4e-07
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 5/80 (6%)

Query: 18  RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEH 77
           R+ +FK+WP     A     +A+AG  +   +   D+ QCF C   LE W+  DDP+++H
Sbjct: 119 RLDSFKDWP--RESAVGVAALAKAGLFYTGIK---DIVQCFSCGGCLEKWQEGDDPLDDH 173

Query: 78  KKHSSGCAFLSVKKQFEELT 97
            +    C FL   K   E+T
Sbjct: 174 TRCFPNCPFLQNMKSSAEVT 193


>gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo
           sapiens]
          Length = 604

 Score = 48.9 bits (115), Expect = 1e-06
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 18  RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEH 77
           R+ TF+ WP       +P  +A+AGF +       D   CF C  +L  WEP D+ + EH
Sbjct: 172 RLLTFQTWPLT---FLSPTDLAKAGFYYI---GPGDRVACFACGGKLSNWEPKDNAMSEH 225

Query: 78  KKHSSGCAFLSVKKQ 92
            +H   C F+  + Q
Sbjct: 226 LRHFPKCPFIENQLQ 240



 Score = 47.0 bits (110), Expect = 5e-06
 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 18  RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEH 77
           R  TF NWP        PE++A AGF +    ++    +CF C   L  WE  DDP  +H
Sbjct: 258 RFKTFFNWP--SSVLVNPEQLASAGFYYVGNSDD---VKCFCCDGGLRCWESGDDPWVQH 312

Query: 78  KKHSSGCAFL 87
            K    C +L
Sbjct: 313 AKWFPRCEYL 322



 Score = 43.9 bits (102), Expect = 5e-05
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)

Query: 17 HRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEE 76
          +R+ST+  +P   G   +   +A AGF +       D  +CF C   L+ W+  D P E+
Sbjct: 31 YRMSTYSTFP--AGVPVSERSLARAGFYYTGVN---DKVKCFCCGLMLDNWKRGDSPTEK 85

Query: 77 HKKHSSGCAFL 87
          HKK    C F+
Sbjct: 86 HKKLYPSCRFV 96


>gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo
           sapiens]
          Length = 604

 Score = 48.9 bits (115), Expect = 1e-06
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 18  RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEH 77
           R+ TF+ WP       +P  +A+AGF +       D   CF C  +L  WEP D+ + EH
Sbjct: 172 RLLTFQTWPLT---FLSPTDLAKAGFYYI---GPGDRVACFACGGKLSNWEPKDNAMSEH 225

Query: 78  KKHSSGCAFLSVKKQ 92
            +H   C F+  + Q
Sbjct: 226 LRHFPKCPFIENQLQ 240



 Score = 47.0 bits (110), Expect = 5e-06
 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 18  RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEH 77
           R  TF NWP        PE++A AGF +    ++    +CF C   L  WE  DDP  +H
Sbjct: 258 RFKTFFNWP--SSVLVNPEQLASAGFYYVGNSDD---VKCFCCDGGLRCWESGDDPWVQH 312

Query: 78  KKHSSGCAFL 87
            K    C +L
Sbjct: 313 AKWFPRCEYL 322



 Score = 43.9 bits (102), Expect = 5e-05
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)

Query: 17 HRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEE 76
          +R+ST+  +P   G   +   +A AGF +       D  +CF C   L+ W+  D P E+
Sbjct: 31 YRMSTYSTFP--AGVPVSERSLARAGFYYTGVN---DKVKCFCCGLMLDNWKRGDSPTEK 85

Query: 77 HKKHSSGCAFL 87
          HKK    C F+
Sbjct: 86 HKKLYPSCRFV 96


>gi|215982794 myosin VA isoform 2 [Homo sapiens]
          Length = 1828

 Score = 30.8 bits (68), Expect = 0.39
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 76   EHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAK-NKIAKETNNKKKEFEETAEKVRRA 134
            E +K  S    L + ++  ++  G  L L  E AK  K  ++T ++KK  EE A++ ++ 
Sbjct: 960  ETEKLRSDLERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKCIEEHADRYKQE 1019

Query: 135  IEQLAA 140
             EQL +
Sbjct: 1020 TEQLVS 1025


>gi|215982791 myosin VA isoform 1 [Homo sapiens]
          Length = 1855

 Score = 30.8 bits (68), Expect = 0.39
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 76   EHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAK-NKIAKETNNKKKEFEETAEKVRRA 134
            E +K  S    L + ++  ++  G  L L  E AK  K  ++T ++KK  EE A++ ++ 
Sbjct: 960  ETEKLRSDLERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKCIEEHADRYKQE 1019

Query: 135  IEQLAA 140
             EQL +
Sbjct: 1020 TEQLVS 1025


>gi|143770880 laminin, beta 4 [Homo sapiens]
          Length = 1761

 Score = 29.6 bits (65), Expect = 0.88
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 5/56 (8%)

Query: 76   EHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNKKKEFEETAEKV 131
            E  +H +G    S++K+F EL   ++  L R+ +   + KET  K K+ ++ AEK+
Sbjct: 1653 ESAQHQAG----SLEKEFVELKK-QYAILQRKTSTTGLTKETLGKVKQLKDAAEKL 1703


>gi|4503945 glucagon preproprotein [Homo sapiens]
          Length = 180

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 6/62 (9%)

Query: 70  DDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLK--LDRERAKNKIAKETNNKKKEFEET 127
           D D + E K+HS G       K  +     +F++  ++ +R +N IAK    +  EFE  
Sbjct: 43  DPDQMNEDKRHSQGTFTSDYSKYLDSRRAQDFVQWLMNTKRNRNNIAK----RHDEFERH 98

Query: 128 AE 129
           AE
Sbjct: 99  AE 100


>gi|16418355 cAMP responsive element binding protein 3-like 1 [Homo
           sapiens]
          Length = 519

 Score = 28.9 bits (63), Expect = 1.5
 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 102 LKLDRERAKNKI-AKETNNKKKEFEETAEK 130
           LK  R + KNKI A+E+  KKKE+ E  EK
Sbjct: 291 LKRVRRKIKNKISAQESRRKKKEYVECLEK 320


>gi|224994221 SH3-domain binding protein 2 isoform b [Homo
          sapiens]
          Length = 618

 Score = 28.5 bits (62), Expect = 2.0
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 10/50 (20%)

Query: 2  GAPTLPPAWQPFLKDHRISTFKNWPF------LEGCACTPERMAEAGFIH 45
          G P +P AW PF+    +    +WP        +     P  +A+AG++H
Sbjct: 46 GKPAMPAAWTPFMAAEEM----HWPVPMKAIGAQNLLTMPGGVAKAGYLH 91


>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
           sapiens]
          Length = 693

 Score = 28.5 bits (62), Expect = 2.0
 Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 89  VKKQFEELTLGEFLKLDRERAKNKIA-KETNNKKKEFEETAEKVRRAIEQL 138
           ++KQ E L L +  KLD++ A+ + + ++ NN+KK   +  ++V+   E+L
Sbjct: 423 LQKQEERLALSQNHKLDKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKL 473


>gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C
           isoform 1 [Homo sapiens]
          Length = 693

 Score = 28.5 bits (62), Expect = 2.0
 Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 89  VKKQFEELTLGEFLKLDRERAKNKIA-KETNNKKKEFEETAEKVRRAIEQL 138
           ++KQ E L L +  KLD++ A+ + + ++ NN+KK   +  ++V+   E+L
Sbjct: 423 LQKQEERLALSQNHKLDKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKL 473


>gi|56550067 cAMP responsive element binding protein 3-like 2 [Homo
           sapiens]
          Length = 520

 Score = 28.5 bits (62), Expect = 2.0
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)

Query: 102 LKLDRERAKNKI-AKETNNKKKEFEETAEK 130
           LK  R + KNKI A+E+  KKKE+ ++ EK
Sbjct: 295 LKKIRRKIKNKISAQESRRKKKEYMDSLEK 324


>gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo
           sapiens]
          Length = 693

 Score = 28.5 bits (62), Expect = 2.0
 Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 89  VKKQFEELTLGEFLKLDRERAKNKIA-KETNNKKKEFEETAEKVRRAIEQL 138
           ++KQ E L L +  KLD++ A+ + + ++ NN+KK   +  ++V+   E+L
Sbjct: 423 LQKQEERLALSQNHKLDKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKL 473


>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
           sapiens]
          Length = 693

 Score = 28.5 bits (62), Expect = 2.0
 Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 89  VKKQFEELTLGEFLKLDRERAKNKIA-KETNNKKKEFEETAEKVRRAIEQL 138
           ++KQ E L L +  KLD++ A+ + + ++ NN+KK   +  ++V+   E+L
Sbjct: 423 LQKQEERLALSQNHKLDKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKL 473


>gi|37577287 syntaxin 2 isoform 1 [Homo sapiens]
          Length = 287

 Score = 27.7 bits (60), Expect = 3.3
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 89  VKKQFEELTLGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVR---RAIEQ 137
           + +  EE+     + L     + KI +E  +  KE ++TA K+R   +AIEQ
Sbjct: 46  ITQYVEEVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQ 97


>gi|37577162 syntaxin 2 isoform 2 [Homo sapiens]
          Length = 288

 Score = 27.7 bits (60), Expect = 3.3
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 89  VKKQFEELTLGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVR---RAIEQ 137
           + +  EE+     + L     + KI +E  +  KE ++TA K+R   +AIEQ
Sbjct: 46  ITQYVEEVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQ 97


>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
          Length = 2039

 Score = 27.7 bits (60), Expect = 3.3
 Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 75  EEHKK--HSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVR 132
           E+H     +S C    + K+ + L   +    +RE+ K+K   E   +K + +++A++++
Sbjct: 604 EDHSPTFENSDCTLKKMDKEGKTLKKHKLKHKEREKEKHKKEIEGEKEKYKTKDSAKELQ 663

Query: 133 RAIE 136
           R++E
Sbjct: 664 RSVE 667


>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
          Length = 2062

 Score = 27.7 bits (60), Expect = 3.3
 Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 75  EEHKK--HSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVR 132
           E+H     +S C    + K+ + L   +    +RE+ K+K   E   +K + +++A++++
Sbjct: 627 EDHSPTFENSDCTLKKMDKEGKTLKKHKLKHKEREKEKHKKEIEGEKEKYKTKDSAKELQ 686

Query: 133 RAIE 136
           R++E
Sbjct: 687 RSVE 690


>gi|4826894 phosphodiesterase 1C [Homo sapiens]
          Length = 634

 Score = 27.3 bits (59), Expect = 4.4
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 87  LSVKKQFEELTLGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVRRAIEQ 137
           +SV  +  + T  E + ++RER + K+ KE   KK    E  EK R A E+
Sbjct: 499 ISVDYKSFKATWTEVVHINRERWRAKVPKEEKAKK----EAEEKARLAAEE 545


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 27.3 bits (59), Expect = 4.4
 Identities = 15/50 (30%), Positives = 26/50 (52%)

Query: 88  SVKKQFEELTLGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVRRAIEQ 137
           S +  FEEL          E A+ K+  E + + K  E+T+E+ R +++Q
Sbjct: 408 SERAAFEELEKALSTAQKTEEARRKLKAEMDEQIKTIEKTSEEERISLQQ 457


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,888,246
Number of Sequences: 37866
Number of extensions: 266552
Number of successful extensions: 1256
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1206
Number of HSP's gapped (non-prelim): 82
length of query: 142
length of database: 18,247,518
effective HSP length: 92
effective length of query: 50
effective length of database: 14,763,846
effective search space: 738192300
effective search space used: 738192300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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