Search of human proteins with 5902038

Search of human proteins with 5902038

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5902038 RAB, member of RAS oncogene family-like 2A [Homo
sapiens]
         (228 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7549817 RAB, member of RAS oncogene family-like 2A [Homo sapi...   460   e-130
gi|5902038 RAB, member of RAS oncogene family-like 2A [Homo sapi...   460   e-130
gi|195963427 RAB, member of RAS oncogene family-like 2B isoform ...   457   e-129
gi|5902040 RAB, member of RAS oncogene family-like 2B isoform 2 ...   457   e-129
gi|51317349 RAB, member of RAS oncogene family-like 2B isoform 1...   452   e-128
gi|195963425 RAB, member of RAS oncogene family-like 2B isoform ...   452   e-128
gi|195963423 RAB, member of RAS oncogene family-like 2B isoform ...   452   e-128
gi|195963421 RAB, member of RAS oncogene family-like 2B isoform ...   452   e-128
gi|195963429 RAB, member of RAS oncogene family-like 2B isoform ...   449   e-127
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]        105   2e-23
gi|4758984 Ras-related protein Rab-11A [Homo sapiens]                 104   5e-23
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]           104   5e-23
gi|4759012 RAB9A, member RAS oncogene family [Homo sapiens]           102   3e-22
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]          101   6e-22
gi|7705963 RAB9B, member RAS oncogene family [Homo sapiens]           101   6e-22
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...   100   8e-22
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]           99   2e-21
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]           98   5e-21
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]           96   3e-20
gi|34147513 RAB7, member RAS oncogene family [Homo sapiens]            94   7e-20
gi|5453555 ras-related nuclear protein [Homo sapiens]                  92   3e-19
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa...    92   3e-19
gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]            92   3e-19
gi|19923483 GTPase Rab14 [Homo sapiens]                                92   4e-19
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]          91   6e-19
gi|13786129 RAB33B, member RAS oncogene family [Homo sapiens]          91   8e-19
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]           90   1e-18
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa...    90   2e-18
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa...    90   2e-18
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]          89   3e-18

>gi|7549817 RAB, member of RAS oncogene family-like 2A [Homo
           sapiens]
          Length = 228

 Score =  460 bits (1184), Expect = e-130
 Identities = 228/228 (100%), Positives = 228/228 (100%)

Query: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
           MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60

Query: 61  HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR 120
           HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
Sbjct: 61  HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR 120

Query: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSY 180
           EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSY
Sbjct: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSY 180

Query: 181 KQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS 228
           KQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
Sbjct: 181 KQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS 228


>gi|5902038 RAB, member of RAS oncogene family-like 2A [Homo
           sapiens]
          Length = 228

 Score =  460 bits (1184), Expect = e-130
 Identities = 228/228 (100%), Positives = 228/228 (100%)

Query: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
           MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60

Query: 61  HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR 120
           HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
Sbjct: 61  HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR 120

Query: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSY 180
           EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSY
Sbjct: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSY 180

Query: 181 KQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS 228
           KQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
Sbjct: 181 KQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS 228


>gi|195963427 RAB, member of RAS oncogene family-like 2B isoform 2
           [Homo sapiens]
          Length = 228

 Score =  457 bits (1176), Expect = e-129
 Identities = 225/228 (98%), Positives = 227/228 (99%)

Query: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
           MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60

Query: 61  HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR 120
           HTATVDG+TILVDFWDTAGQERFQSMHASYYHKAHACIMVFD+QRKVTYRNLSTWYTELR
Sbjct: 61  HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120

Query: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSY 180
           EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSY
Sbjct: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSY 180

Query: 181 KQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS 228
           KQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEE ASPHS
Sbjct: 181 KQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 228


>gi|5902040 RAB, member of RAS oncogene family-like 2B isoform 2
           [Homo sapiens]
          Length = 228

 Score =  457 bits (1176), Expect = e-129
 Identities = 225/228 (98%), Positives = 227/228 (99%)

Query: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
           MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60

Query: 61  HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR 120
           HTATVDG+TILVDFWDTAGQERFQSMHASYYHKAHACIMVFD+QRKVTYRNLSTWYTELR
Sbjct: 61  HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120

Query: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSY 180
           EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSY
Sbjct: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSY 180

Query: 181 KQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS 228
           KQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEE ASPHS
Sbjct: 181 KQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 228


>gi|51317349 RAB, member of RAS oncogene family-like 2B isoform 1
           [Homo sapiens]
          Length = 229

 Score =  452 bits (1164), Expect = e-128
 Identities = 225/229 (98%), Positives = 227/229 (99%), Gaps = 1/229 (0%)

Query: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
           MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60

Query: 61  HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR 120
           HTATVDG+TILVDFWDTAGQERFQSMHASYYHKAHACIMVFD+QRKVTYRNLSTWYTELR
Sbjct: 61  HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120

Query: 121 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS 179
           EFRPEIPCIVVANKID DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
Sbjct: 121 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS 180

Query: 180 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS 228
           YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEE ASPHS
Sbjct: 181 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 229


>gi|195963425 RAB, member of RAS oncogene family-like 2B isoform 1
           [Homo sapiens]
          Length = 229

 Score =  452 bits (1164), Expect = e-128
 Identities = 225/229 (98%), Positives = 227/229 (99%), Gaps = 1/229 (0%)

Query: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
           MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60

Query: 61  HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR 120
           HTATVDG+TILVDFWDTAGQERFQSMHASYYHKAHACIMVFD+QRKVTYRNLSTWYTELR
Sbjct: 61  HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120

Query: 121 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS 179
           EFRPEIPCIVVANKID DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
Sbjct: 121 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS 180

Query: 180 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS 228
           YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEE ASPHS
Sbjct: 181 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 229


>gi|195963423 RAB, member of RAS oncogene family-like 2B isoform 1
           [Homo sapiens]
          Length = 229

 Score =  452 bits (1164), Expect = e-128
 Identities = 225/229 (98%), Positives = 227/229 (99%), Gaps = 1/229 (0%)

Query: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
           MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60

Query: 61  HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR 120
           HTATVDG+TILVDFWDTAGQERFQSMHASYYHKAHACIMVFD+QRKVTYRNLSTWYTELR
Sbjct: 61  HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120

Query: 121 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS 179
           EFRPEIPCIVVANKID DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
Sbjct: 121 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS 180

Query: 180 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS 228
           YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEE ASPHS
Sbjct: 181 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 229


>gi|195963421 RAB, member of RAS oncogene family-like 2B isoform 1
           [Homo sapiens]
          Length = 229

 Score =  452 bits (1164), Expect = e-128
 Identities = 225/229 (98%), Positives = 227/229 (99%), Gaps = 1/229 (0%)

Query: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
           MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60

Query: 61  HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR 120
           HTATVDG+TILVDFWDTAGQERFQSMHASYYHKAHACIMVFD+QRKVTYRNLSTWYTELR
Sbjct: 61  HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120

Query: 121 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS 179
           EFRPEIPCIVVANKID DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
Sbjct: 121 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS 180

Query: 180 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS 228
           YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEE ASPHS
Sbjct: 181 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 229


>gi|195963429 RAB, member of RAS oncogene family-like 2B isoform 3
           [Homo sapiens]
          Length = 238

 Score =  449 bits (1155), Expect = e-127
 Identities = 225/238 (94%), Positives = 227/238 (95%), Gaps = 10/238 (4%)

Query: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
           MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1   MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60

Query: 61  HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR 120
           HTATVDG+TILVDFWDTAGQERFQSMHASYYHKAHACIMVFD+QRKVTYRNLSTWYTELR
Sbjct: 61  HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120

Query: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVV----------KLF 170
           EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVV          KLF
Sbjct: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKLF 180

Query: 171 NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS 228
           NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEE ASPHS
Sbjct: 181 NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 238


>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  105 bits (263), Expect = 2e-23
 Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 5/157 (3%)

Query: 23  KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQER 82
           K++ +GDS VGKS L+ RF  + F  +  ST  +     +  VDGKTI    WDTAGQER
Sbjct: 13  KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72

Query: 83  FQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREFR-PEIPCIVVANKIDDINV- 140
           ++++ ++YY  A   ++V+DI + +TY N+  W  ELR+     I  ++V NK D  ++ 
Sbjct: 73  YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 132

Query: 141 ---TQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAI 174
              T ++  FA+K +L     SA D TNV + F + +
Sbjct: 133 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNIL 169


>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
          Length = 216

 Score =  104 bits (260), Expect = 5e-23
 Identities = 64/170 (37%), Positives = 92/170 (54%), Gaps = 8/170 (4%)

Query: 23  KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQER 82
           K++ +GDS VGKS L+ RF  + F  +  ST  +     +  VDGKTI    WDTAGQER
Sbjct: 13  KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72

Query: 83  FQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREFR-PEIPCIVVANKIDDINV- 140
           ++++ ++YY  A   ++V+DI + +TY N+  W  ELR+     I  ++V NK D  ++ 
Sbjct: 73  YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 132

Query: 141 ---TQKSFNFAKKFSLPLYFVSAADGTNVVKLFN---DAIRLAVSYKQNS 184
              T ++  FA+K  L     SA D TNV   F      I   VS KQ S
Sbjct: 133 AVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182


>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  104 bits (260), Expect = 5e-23
 Identities = 53/172 (30%), Positives = 96/172 (55%), Gaps = 4/172 (2%)

Query: 17  DADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWD 76
           D D   K++ +GDS VGKS L+ RF  + F    ++T  +     T  ++G+ + +  WD
Sbjct: 4   DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63

Query: 77  TAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREFRPEIPCIVVANKID 136
           TAGQERF+++ ++YY   H  I+V+D+    ++ N+  W  E+ +   ++  I+V NK D
Sbjct: 64  TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKND 123

Query: 137 D----INVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSYKQNS 184
           D    +  T+ ++ FA +  + L+  SA +  NV ++FN    L +  K+++
Sbjct: 124 DPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDN 175


>gi|4759012 RAB9A, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  102 bits (254), Expect = 3e-22
 Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 15/174 (8%)

Query: 23  KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQER 82
           K+I LGD  VGKS LM R++ + F  Q   T  +        VDG  + +  WDTAGQER
Sbjct: 9   KVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQER 68

Query: 83  FQSMHASYYHKAHACIMVFDIQRKVTYRNLSTW------YTELREFRPE-IPCIVVANKI 135
           F+S+   +Y  +  C++ F +    +++NLS W      Y +++E  PE  P +++ NKI
Sbjct: 69  FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKE--PESFPFVILGNKI 126

Query: 136 DDINVTQKSFNFAKKF-----SLPLYFVSAADGTNVVKLFNDAIRLAVSYKQNS 184
            DI+  Q S   A+ +       P +  SA D TNV   F +A+R  ++ +  S
Sbjct: 127 -DISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRS 179


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  101 bits (251), Expect = 6e-22
 Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 9/155 (5%)

Query: 23  KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQER 82
           K++ +GDS VGKS L+ RF  D +    +ST  +     T  +DGKTI +  WDTAGQER
Sbjct: 10  KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69

Query: 83  FQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREFRPE-IPCIVVANKIDDI--- 138
           F+++ +SYY  AH  I+V+D+  + +Y N+  W  E+  +  E +  ++V NK D     
Sbjct: 70  FRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKK 129

Query: 139 ---NVTQKSFNFAKKFSLPLYFVSAADGTNVVKLF 170
              N T K   FA    +P    SA + TNV + F
Sbjct: 130 VVDNTTAK--EFADSLGIPFLETSAKNATNVEQAF 162


>gi|7705963 RAB9B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  101 bits (251), Expect = 6e-22
 Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 9/176 (5%)

Query: 22  VKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQE 81
           +K+I LGD  VGKS LM R++ + F  Q   T  +        VDG+ + +  WDTAGQE
Sbjct: 8   LKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQE 67

Query: 82  RFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREFR----PE-IPCIVVANKID 136
           RF+S+   +Y  A  C++ F +  + ++ NL  W  E   +     PE  P +V+ NK+D
Sbjct: 68  RFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVD 127

Query: 137 --DINVTQKSFN--FAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSYKQNSQDFM 188
             D  VT +       +    P    SA D TNV   F +A+R  ++ ++  +  M
Sbjct: 128 KEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLEHCM 183


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score =  100 bits (250), Expect = 8e-22
 Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 5/153 (3%)

Query: 23  KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQER 82
           K++ +GDS VGKS L+ RF  D +    +ST  +     T  +DGKTI +  WDTAGQER
Sbjct: 13  KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72

Query: 83  FQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREFRPE-IPCIVVANKIDDINVT 141
           F+++ +SYY  AH  I+V+D+  + ++ N+  W  E+  +  E +  ++V NK D     
Sbjct: 73  FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKK 132

Query: 142 QKSFNFAKKFS----LPLYFVSAADGTNVVKLF 170
              +  AK+F+    +P    SA + TNV + F
Sbjct: 133 VVDYTTAKEFADSLGIPFLETSAKNATNVEQSF 165


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 62/174 (35%), Positives = 99/174 (56%), Gaps = 6/174 (3%)

Query: 17  DADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWD 76
           D D   KI+ +G++ VGK+ L+ RF    F P Q +T  +     T  ++G+ + +  WD
Sbjct: 5   DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWD 64

Query: 77  TAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREFRP-EIPCIVVANKI 135
           TAGQERF+S+  SYY  A+A I+ +DI  + ++R L  W  E+ ++   ++  ++V NKI
Sbjct: 65  TAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKI 124

Query: 136 DDINVTQKSFNFAKKFS--LPLYFV--SAADGTNVVKLFND-AIRLAVSYKQNS 184
           D     + S   A++FS    +Y++  SA +  NV KLF D A RL    +QN+
Sbjct: 125 DLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNT 178


>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
          Length = 206

 Score = 98.2 bits (243), Expect = 5e-21
 Identities = 58/163 (35%), Positives = 85/163 (52%), Gaps = 5/163 (3%)

Query: 17  DADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWD 76
           D    +KI+ +G+S VGKS L+ RF  D F P+  +T  +     T +VDG    +  WD
Sbjct: 4   DVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWD 63

Query: 77  TAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREF--RPEIPCIVVANK 134
           TAGQERF+++  SYY  A   I+V+D+ R+ T+  L  W  EL  +  R +I  ++V NK
Sbjct: 64  TAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNK 123

Query: 135 IDDIN---VTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAI 174
           ID  N      +   FA+K S+     SA     V   F + +
Sbjct: 124 IDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELV 166


>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
          Length = 256

 Score = 95.9 bits (237), Expect = 3e-20
 Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 9/168 (5%)

Query: 23  KIICLGDSAVGKSKLMERFLMDGFQPQQ-LSTYALTLYKHTATVDGKTILVDFWDTAGQE 81
           K++ +GDS VGK+ L+ RF    F     +ST  +        VDG  + +  WDTAGQE
Sbjct: 65  KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQE 124

Query: 82  RFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREF-RPEIPCIVVANKIDD--- 137
           RF+S+  +YY  AHA ++++D+  K ++ N+  W TE+ E+ + ++  +++ NK+D    
Sbjct: 125 RFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHE 184

Query: 138 -INVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSYKQNS 184
            +   +     AK++ LP    SA  G NV   F     +A   KQ S
Sbjct: 185 RVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFT---AIAKELKQRS 229


>gi|34147513 RAB7, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score = 94.4 bits (233), Expect = 7e-20
 Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 15/203 (7%)

Query: 22  VKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQE 81
           +K+I LGDS VGK+ LM +++   F  Q  +T           VD + + +  WDTAGQE
Sbjct: 9   LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68

Query: 82  RFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTE-LREFRP----EIPCIVVANKID 136
           RFQS+  ++Y  A  C++VFD+    T++ L +W  E L +  P      P +V+ NKID
Sbjct: 69  RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128

Query: 137 DIN---VTQKSFNFA-KKFSLPLYFVSAADGTNVVKLFNDAIRLAVSYKQNSQDFMDEIF 192
             N    T+++  +   K ++P +  SA +  NV + F    R A+      Q+   E++
Sbjct: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL-----KQETEVELY 183

Query: 193 QEL-ENFSLEQEEEDVPDQEQSS 214
            E  E   L++ +      E  S
Sbjct: 184 NEFPEPIKLDKNDRAKASAESCS 206


>gi|5453555 ras-related nuclear protein [Homo sapiens]
          Length = 216

 Score = 92.4 bits (228), Expect = 3e-19
 Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 2/150 (1%)

Query: 23  KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQER 82
           K++ +GD   GK+  ++R L   F+ + ++T  + ++      +   I  + WDTAGQE+
Sbjct: 12  KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEK 71

Query: 83  FQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREFRPEIPCIVVANKID--DINV 140
           F  +   YY +A   I++FD+  +VTY+N+  W+ +L      IP ++  NK+D  D  V
Sbjct: 72  FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKV 131

Query: 141 TQKSFNFAKKFSLPLYFVSAADGTNVVKLF 170
             KS  F +K +L  Y +SA    N  K F
Sbjct: 132 KAKSIVFHRKKNLQYYDISAKSNYNFEKPF 161


>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
           sapiens]
          Length = 216

 Score = 92.4 bits (228), Expect = 3e-19
 Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 9/177 (5%)

Query: 17  DADDNV--KIICLGDSAVGKSKLMERFLMDGFQPQQLS-TYALTLYKHTATVDGKTILVD 73
           D +D+V  K I +GDS VGK+ L+ +F    F P   S T  +       TVDG  + + 
Sbjct: 16  DFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQ 75

Query: 74  FWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREF-RPEIPCIVVA 132
            WDTAGQERF+S+  +YY  A A ++++DI  K ++ N+  W TE+ E+ + ++  +++ 
Sbjct: 76  IWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLG 135

Query: 133 NKID----DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSYKQNSQ 185
           NK D     +  ++     A+++ +P    SA  G NV   F  AI   + Y+   Q
Sbjct: 136 NKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFL-AIAKELKYRAGHQ 191


>gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
          Length = 215

 Score = 92.4 bits (228), Expect = 3e-19
 Identities = 56/153 (36%), Positives = 76/153 (49%), Gaps = 5/153 (3%)

Query: 23  KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQER 82
           K++ LG+SAVGKS L+ RF+   F   Q ST        +  +D  T+  + WDTAGQER
Sbjct: 22  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81

Query: 83  FQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTEL-REFRPEIPCIVVANKIDDINVT 141
           + S+   YY  A A I+V+DI  + T+    TW  EL R+  P I   +  NK D  N  
Sbjct: 82  YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141

Query: 142 QKSFNFAKKF----SLPLYFVSAADGTNVVKLF 170
              +  A+ +    SL     SA    NV  LF
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLF 174


>gi|19923483 GTPase Rab14 [Homo sapiens]
          Length = 215

 Score = 92.0 bits (227), Expect = 4e-19
 Identities = 62/169 (36%), Positives = 86/169 (50%), Gaps = 8/169 (4%)

Query: 23  KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQER 82
           K I +GD  VGKS L+ +F    F      T  +        V G+ I +  WDTAGQER
Sbjct: 13  KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 72

Query: 83  FQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREF-RPEIPCIVVANKID---DI 138
           F+++  SYY  A   +MV+DI R+ TY +LS+W T+ R    P    I++ NK D     
Sbjct: 73  FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQR 132

Query: 139 NVT-QKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSYKQNSQD 186
           +VT +++  FA++  L     SA  G NV   F +A   A    QN QD
Sbjct: 133 DVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEA---AKKIYQNIQD 178


>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
          Length = 244

 Score = 91.3 bits (225), Expect = 6e-19
 Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 13/200 (6%)

Query: 18  ADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDT 77
           AD  +++I +G   VGK+ LMERF  D F     ST  +     T  + GK I +  WDT
Sbjct: 39  ADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDT 98

Query: 78  AGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREFRPE-IPCIVVANKID 136
           AGQERF S+ ++YY  A   I+V+DI +K T+ +L  W   + ++  E    ++V NK+D
Sbjct: 99  AGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLD 158

Query: 137 ---DINVT-QKSFNFAKKFS-LPLYFVSAADGTNVVKLFNDAIRLAVSYKQNSQDFMDEI 191
              D  +T Q+   FA++ + +     SA D  NV ++F   ++L     +     +D +
Sbjct: 159 CETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIF---LKLVDDILKKMP--LDIL 213

Query: 192 FQELEN--FSLEQEEEDVPD 209
             EL N   SL+ E E  P+
Sbjct: 214 RNELSNSILSLQPEPEIPPE 233


>gi|13786129 RAB33B, member RAS oncogene family [Homo sapiens]
          Length = 229

 Score = 90.9 bits (224), Expect = 8e-19
 Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 10/169 (5%)

Query: 23  KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQER 82
           KII +GDS VGK+ L  RF    F  +  +T  +   +    +DG+ I +  WDTAGQER
Sbjct: 35  KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQER 94

Query: 83  F-QSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELRE--FRPEIPCIVVANKIDDIN 139
           F +SM   YY   HA + V+D+    ++ +L +W  E ++     +IP I+V NK D  +
Sbjct: 95  FRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDLRS 154

Query: 140 VTQKSFNFAKKF----SLPLYFVSAA---DGTNVVKLFNDAIRLAVSYK 181
             Q   + A+KF    S+PL+  SA    D  +V  +F        S+K
Sbjct: 155 AIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHK 203


>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
          Length = 215

 Score = 90.1 bits (222), Expect = 1e-18
 Identities = 55/153 (35%), Positives = 76/153 (49%), Gaps = 5/153 (3%)

Query: 23  KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQER 82
           K++ LG+SAVGKS L+ RF+   F   Q ST        T  +D  T+  + WDTAGQER
Sbjct: 22  KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 81

Query: 83  FQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTEL-REFRPEIPCIVVANKIDDINVT 141
           + S+   YY  A A I+V+DI  + ++     W  EL R+  P I   +  NK D  N  
Sbjct: 82  YHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKR 141

Query: 142 QKSFNFAKKF----SLPLYFVSAADGTNVVKLF 170
              F  A+ +    SL     SA    NV ++F
Sbjct: 142 AVDFQEAQSYADDNSLLFMETSAKTSMNVNEIF 174


>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
           sapiens]
          Length = 216

 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 55/153 (35%), Positives = 75/153 (49%), Gaps = 5/153 (3%)

Query: 23  KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQER 82
           K++ LG+SAVGKS L+ RF+   F   Q ST        T  +D  T+  + WDTAGQER
Sbjct: 23  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82

Query: 83  FQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTEL-REFRPEIPCIVVANKIDDINVT 141
           + S+   YY  A A I+V+DI    T+     W  EL R+  P I   +  NK D  +  
Sbjct: 83  YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKR 142

Query: 142 QKSFNFAKKF----SLPLYFVSAADGTNVVKLF 170
              F  A+ +    SL     SA    NV ++F
Sbjct: 143 AVEFQEAQAYADDNSLLFMETSAKTAMNVNEIF 175


>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
           sapiens]
          Length = 216

 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 55/153 (35%), Positives = 75/153 (49%), Gaps = 5/153 (3%)

Query: 23  KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQER 82
           K++ LG+SAVGKS L+ RF+   F   Q ST        T  +D  T+  + WDTAGQER
Sbjct: 23  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82

Query: 83  FQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTEL-REFRPEIPCIVVANKIDDINVT 141
           + S+   YY  A A I+V+DI    T+     W  EL R+  P I   +  NK D  +  
Sbjct: 83  YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKR 142

Query: 142 QKSFNFAKKF----SLPLYFVSAADGTNVVKLF 170
              F  A+ +    SL     SA    NV ++F
Sbjct: 143 AVEFQEAQAYADDNSLLFMETSAKTAMNVNEIF 175


>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
          Length = 213

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 53/153 (34%), Positives = 80/153 (52%), Gaps = 5/153 (3%)

Query: 23  KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQER 82
           K + +G +  GKS L+ +F+ + F+     T  +        V GKT+ +  WDTAGQER
Sbjct: 10  KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQER 69

Query: 83  FQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREF-RPEIPCIVVANKID---DI 138
           F+S+  SYY  A   ++V+DI  + TY +L+ W T+ R    P I  I+  NK D   + 
Sbjct: 70  FRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPER 129

Query: 139 NVT-QKSFNFAKKFSLPLYFVSAADGTNVVKLF 170
            VT  ++  FA++  L     SA  G NV + F
Sbjct: 130 EVTFLEASRFAQENELMFLETSALTGENVEEAF 162


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.131    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,058,589
Number of Sequences: 37866
Number of extensions: 321115
Number of successful extensions: 2150
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 1823
Number of HSP's gapped (non-prelim): 253
length of query: 228
length of database: 18,247,518
effective HSP length: 99
effective length of query: 129
effective length of database: 14,498,784
effective search space: 1870343136
effective search space used: 1870343136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.