Guide to the Human Genome
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Name: RABL2B Sequence: fasta or formatted (228aa) NCBI GI: 5902040
Description:

RAB, member of RAS oncogene family-like 2B isoform 2

Referenced in:

Rab

Other entries for this name:
alt prot [229aa] RAB, member of RAS oncogene family-like 2B isoform 1
alt prot [229aa] RAB, member of RAS oncogene family-like 2B isoform 1
alt prot [229aa] RAB, member of RAS oncogene family-like 2B isoform 1
alt mRNA [228aa] RAB, member of RAS oncogene family-like 2B isoform 2
alt prot [238aa] RAB, member of RAS oncogene family-like 2B isoform 3
alt prot [229aa] RAB, member of RAS oncogene family-like 2B isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         17           2
 C cysteine            1.3          3           1
 D aspartate           8.3         19           2
 E glutamate           7.9         18           3
 F phenylalanine       6.1         14           1
 G glycine             3.1          7           1
 H histidine           2.2          5           1
 I isoleucine          4.8         11           2
 K lysine              6.6         15           2
 L leucine             7.0         16           1
 M methionine          2.6          6           1
 N asparagine          3.9          9           1
 P proline             3.5          8           1
 Q glutamine           6.1         14           2
 R arginine            3.5          8           1
 S serine              8.3         19           3
 T threonine           5.7         13           1
 V valine              6.6         15           2
 W tryptophan          0.9          2           1
 Y tyrosine            3.9          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB, member of RAS oncogene family-like 2B isoform 2 ... 
RABL2B                1.000   RAB, member of RAS oncogene family-like 2B isoform ...
RABL2A                0.993   RAB, member of RAS oncogene family-like 2A 
RABL2A                0.993   RAB, member of RAS oncogene family-like 2A 
RABL2B                0.991   RAB, member of RAS oncogene family-like 2B isoform 1...
RABL2B                0.991   RAB, member of RAS oncogene family-like 2B isoform ...
RABL2B                0.991   RAB, member of RAS oncogene family-like 2B isoform ...
RABL2B                0.991   RAB, member of RAS oncogene family-like 2B isoform ...
RABL2B                0.982   RAB, member of RAS oncogene family-like 2B isoform ...
RAB35                 0.182   RAB35, member RAS oncogene family 
RAB11B                0.182   RAB11B, member RAS oncogene family 
RAB9A                 0.179   RAB9A, member RAS oncogene family 
RAB11A                0.179   Ras-related protein Rab-11A 
RAB9B                 0.177   RAB9B, member RAS oncogene family 
RAB1B                 0.172   RAB1B, member RAS oncogene family 
RAB1A                 0.172   RAB1A, member RAS oncogene family isoform 1 
RAB18                 0.170   RAB18, member RAS oncogene family 
RAB30                 0.170   RAB30, member RAS oncogene family 
RAB7A                 0.163   RAB7, member RAS oncogene family 
RAB26                 0.163   RAB26, member RAS oncogene family 
RAN                   0.156   ras-related nuclear protein 
RAB5B                 0.154   RAB5B, member RAS oncogene family 
RAB37                 0.154   RAB37, member RAS oncogene family isoform 3 
RAB14                 0.154   GTPase Rab14 
RAB33B                0.152   RAB33B, member RAS oncogene family 
RAB5A                 0.149   RAB5A, member RAS oncogene family 
RAB12                 0.149   RAB12, member RAS oncogene family 
RAB5C                 0.147   RAB5C, member RAS oncogene family isoform a 
RAB5C                 0.147   RAB5C, member RAS oncogene family isoform b 
RAB6A                 0.145   RAB6A, member RAS oncogene family isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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