Guide to the Human Genome
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Name: RABL2B Sequence: fasta or formatted (229aa) NCBI GI: 195963425
Description:

RAB, member of RAS oncogene family-like 2B isoform 1

Referenced in:

Rab

Other entries for this name:
alt mRNA [229aa] RAB, member of RAS oncogene family-like 2B isoform 1
alt mRNA [229aa] RAB, member of RAS oncogene family-like 2B isoform 1
alt prot [228aa] RAB, member of RAS oncogene family-like 2B isoform 2
alt prot [238aa] RAB, member of RAS oncogene family-like 2B isoform 3
alt mRNA [229aa] RAB, member of RAS oncogene family-like 2B isoform 1
alt prot [228aa] RAB, member of RAS oncogene family-like 2B isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         18           2
 C cysteine            1.3          3           1
 D aspartate           8.3         19           2
 E glutamate           7.9         18           3
 F phenylalanine       6.1         14           1
 G glycine             3.1          7           1
 H histidine           2.2          5           1
 I isoleucine          4.8         11           2
 K lysine              6.6         15           2
 L leucine             7.0         16           1
 M methionine          2.6          6           1
 N asparagine          3.9          9           1
 P proline             3.5          8           1
 Q glutamine           6.1         14           2
 R arginine            3.5          8           1
 S serine              8.3         19           3
 T threonine           5.7         13           1
 V valine              6.6         15           2
 W tryptophan          0.9          2           1
 Y tyrosine            3.9          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB, member of RAS oncogene family-like 2B isoform ... 
RABL2B                1.000   RAB, member of RAS oncogene family-like 2B isoform 1...
RABL2B                1.000   RAB, member of RAS oncogene family-like 2B isoform ...
RABL2B                1.000   RAB, member of RAS oncogene family-like 2B isoform ...
RABL2B                0.986   RAB, member of RAS oncogene family-like 2B isoform ...
RABL2B                0.986   RAB, member of RAS oncogene family-like 2B isoform 2 ...
RABL2A                0.977   RAB, member of RAS oncogene family-like 2A 
RABL2A                0.977   RAB, member of RAS oncogene family-like 2A 
RABL2B                0.966   RAB, member of RAS oncogene family-like 2B isoform ...
RAB11B                0.178   RAB11B, member RAS oncogene family 
RAB9A                 0.176   RAB9A, member RAS oncogene family 
RAB9B                 0.176   RAB9B, member RAS oncogene family 
RAB11A                0.176   Ras-related protein Rab-11A 
RAB35                 0.176   RAB35, member RAS oncogene family 
RAB1B                 0.174   RAB1B, member RAS oncogene family 
RAB18                 0.169   RAB18, member RAS oncogene family 
RAB1A                 0.167   RAB1A, member RAS oncogene family isoform 1 
RAB7A                 0.162   RAB7, member RAS oncogene family 
RAB26                 0.162   RAB26, member RAS oncogene family 
RAB30                 0.160   RAB30, member RAS oncogene family 
RAB14                 0.158   GTPase Rab14 
RAN                   0.156   ras-related nuclear protein 
RAB37                 0.153   RAB37, member RAS oncogene family isoform 3 
RAB12                 0.151   RAB12, member RAS oncogene family 
RAB4B                 0.146   ras-related GTP-binding protein 4b 
RAB33B                0.146   RAB33B, member RAS oncogene family 
RAB5B                 0.146   RAB5B, member RAS oncogene family 
RAB5C                 0.144   RAB5C, member RAS oncogene family isoform a 
RAB5C                 0.144   RAB5C, member RAS oncogene family isoform b 
RAB2A                 0.142   RAB2A, member RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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