Guide to the Human Genome
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Name: RABL2B Sequence: fasta or formatted (238aa) NCBI GI: 195963429
Description:

RAB, member of RAS oncogene family-like 2B isoform 3

Referenced in:

Rab

Other entries for this name:
alt prot [229aa] RAB, member of RAS oncogene family-like 2B isoform 1
alt prot [229aa] RAB, member of RAS oncogene family-like 2B isoform 1
alt prot [229aa] RAB, member of RAS oncogene family-like 2B isoform 1
alt prot [228aa] RAB, member of RAS oncogene family-like 2B isoform 2
alt prot [229aa] RAB, member of RAS oncogene family-like 2B isoform 1
alt prot [228aa] RAB, member of RAS oncogene family-like 2B isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         19           2
 C cysteine            1.3          3           1
 D aspartate           8.0         19           2
 E glutamate           8.0         19           3
 F phenylalanine       5.9         14           1
 G glycine             2.9          7           1
 H histidine           2.1          5           1
 I isoleucine          4.6         11           2
 K lysine              6.7         16           2
 L leucine             7.1         17           1
 M methionine          2.5          6           1
 N asparagine          3.8          9           1
 P proline             3.4          8           1
 Q glutamine           5.9         14           2
 R arginine            3.4          8           1
 S serine              8.4         20           3
 T threonine           5.9         14           1
 V valine              7.1         17           2
 W tryptophan          1.3          3           1
 Y tyrosine            3.8          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB, member of RAS oncogene family-like 2B isoform ... 
RABL2B                0.941   RAB, member of RAS oncogene family-like 2B isoform ...
RABL2B                0.941   RAB, member of RAS oncogene family-like 2B isoform 2 ...
RABL2A                0.934   RAB, member of RAS oncogene family-like 2A 
RABL2A                0.934   RAB, member of RAS oncogene family-like 2A 
RABL2B                0.930   RAB, member of RAS oncogene family-like 2B isoform 1...
RABL2B                0.930   RAB, member of RAS oncogene family-like 2B isoform ...
RABL2B                0.930   RAB, member of RAS oncogene family-like 2B isoform ...
RABL2B                0.930   RAB, member of RAS oncogene family-like 2B isoform ...
RAB11A                0.170   Ras-related protein Rab-11A 
RAB1B                 0.170   RAB1B, member RAS oncogene family 
RAB11B                0.170   RAB11B, member RAS oncogene family 
RAB1A                 0.167   RAB1A, member RAS oncogene family isoform 1 
RAB35                 0.161   RAB35, member RAS oncogene family 
RAB18                 0.161   RAB18, member RAS oncogene family 
RAB9A                 0.156   RAB9A, member RAS oncogene family 
RAB9B                 0.154   RAB9B, member RAS oncogene family 
RAB26                 0.154   RAB26, member RAS oncogene family 
RAB30                 0.154   RAB30, member RAS oncogene family 
RAN                   0.152   ras-related nuclear protein 
RAB7A                 0.152   RAB7, member RAS oncogene family 
RAB5B                 0.148   RAB5B, member RAS oncogene family 
RAB14                 0.145   GTPase Rab14 
RAB33B                0.145   RAB33B, member RAS oncogene family 
RAB37                 0.145   RAB37, member RAS oncogene family isoform 3 
RAB12                 0.145   RAB12, member RAS oncogene family 
RAB5A                 0.143   RAB5A, member RAS oncogene family 
RAB5C                 0.143   RAB5C, member RAS oncogene family isoform a 
RAB5C                 0.143   RAB5C, member RAS oncogene family isoform b 
RAB4B                 0.137   ras-related GTP-binding protein 4b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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