Search of human proteins with 5901932

Search of human proteins with 5901932

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5901932 leukocyte cell derived chemotaxin 1 isoform 1
precursor [Homo sapiens]
         (334 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5901932 leukocyte cell derived chemotaxin 1 isoform 1 precurs...   696   0.0  
gi|59806343 leukocyte cell derived chemotaxin 1 isoform 2 precur...   689   0.0  
gi|156627559 tenomodulin [Homo sapiens]                               194   7e-50
gi|149999608 surfactant protein C [Homo sapiens]                       42   6e-04
gi|59858535 trefoil factor interactions(z) 1 [Homo sapiens]            35   0.12 
gi|38348292 coiled-coil domain containing 84 [Homo sapiens]            32   0.61 
gi|226437579 NAC alpha domain containing [Homo sapiens]                31   1.8  
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]     31   1.8  
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]     31   1.8  
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]     31   1.8  
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]     31   1.8  
gi|214832565 hypothetical protein LOC80304 isoform 2 [Homo sapiens]    31   1.8  
gi|13376798 hypothetical protein LOC80304 isoform 1 [Homo sapiens]     31   1.8  
gi|13569885 integral membrane protein 2C isoform 1 [Homo sapiens]      31   1.8  
gi|94538357 18 kDa antrum mucosa protein [Homo sapiens]                30   3.0  
gi|47078235 GDNF family receptor alpha 2 preproprotein [Homo sap...    30   3.9  
gi|215820619 zinc finger protein 646 [Homo sapiens]                    29   5.2  
gi|60302912 integral membrane protein 2C isoform 3 [Homo sapiens]      29   5.2  
gi|95147555 microtubule-associated protein 1A [Homo sapiens]           29   6.7  
gi|13540513 oxysterol binding protein 2 isoform a [Homo sapiens]       29   6.7  
gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens]              28   8.8  
gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens]              28   8.8  
gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens]              28   8.8  
gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens]              28   8.8  
gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens]              28   8.8  
gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens]              28   8.8  

>gi|5901932 leukocyte cell derived chemotaxin 1 isoform 1 precursor
           [Homo sapiens]
          Length = 334

 Score =  696 bits (1795), Expect = 0.0
 Identities = 334/334 (100%), Positives = 334/334 (100%)

Query: 1   MTENSDKVPIALVGPDDVEFCSPPAYATLTVKPSSPARLLKVGAVVLISGAVLLLFGAIG 60
           MTENSDKVPIALVGPDDVEFCSPPAYATLTVKPSSPARLLKVGAVVLISGAVLLLFGAIG
Sbjct: 1   MTENSDKVPIALVGPDDVEFCSPPAYATLTVKPSSPARLLKVGAVVLISGAVLLLFGAIG 60

Query: 61  AFYFWKGSDSHIYNVHYTMSINGKLQDGSMEIDAGNNLETFKMGSGAEEAIAVNDFQNGI 120
           AFYFWKGSDSHIYNVHYTMSINGKLQDGSMEIDAGNNLETFKMGSGAEEAIAVNDFQNGI
Sbjct: 61  AFYFWKGSDSHIYNVHYTMSINGKLQDGSMEIDAGNNLETFKMGSGAEEAIAVNDFQNGI 120

Query: 121 TGIRFAGGEKCYIKAQVKARIPEVGAVTKQSISSKLEGKIMPVKYEENSLIWVAVDQPVK 180
           TGIRFAGGEKCYIKAQVKARIPEVGAVTKQSISSKLEGKIMPVKYEENSLIWVAVDQPVK
Sbjct: 121 TGIRFAGGEKCYIKAQVKARIPEVGAVTKQSISSKLEGKIMPVKYEENSLIWVAVDQPVK 180

Query: 181 DNSFLSSKVLELCGDLPIFWLKPTYPKEIQRERREVVRKIVPTTTKRPHSGPRSNPGAGR 240
           DNSFLSSKVLELCGDLPIFWLKPTYPKEIQRERREVVRKIVPTTTKRPHSGPRSNPGAGR
Sbjct: 181 DNSFLSSKVLELCGDLPIFWLKPTYPKEIQRERREVVRKIVPTTTKRPHSGPRSNPGAGR 240

Query: 241 LNNETRPSVQEDSQAFNPDNPYHQQEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPL 300
           LNNETRPSVQEDSQAFNPDNPYHQQEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPL
Sbjct: 241 LNNETRPSVQEDSQAFNPDNPYHQQEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPL 300

Query: 301 GGYYPWPYNYQGCRSACRVIMPCSWWVARILGMV 334
           GGYYPWPYNYQGCRSACRVIMPCSWWVARILGMV
Sbjct: 301 GGYYPWPYNYQGCRSACRVIMPCSWWVARILGMV 334


>gi|59806343 leukocyte cell derived chemotaxin 1 isoform 2 precursor
           [Homo sapiens]
          Length = 333

 Score =  689 bits (1778), Expect = 0.0
 Identities = 333/334 (99%), Positives = 333/334 (99%), Gaps = 1/334 (0%)

Query: 1   MTENSDKVPIALVGPDDVEFCSPPAYATLTVKPSSPARLLKVGAVVLISGAVLLLFGAIG 60
           MTENSDKVPIALVGPDDVEFCSPPAYATLTVKPSSPARLLKVGAVVLISGAVLLLFGAIG
Sbjct: 1   MTENSDKVPIALVGPDDVEFCSPPAYATLTVKPSSPARLLKVGAVVLISGAVLLLFGAIG 60

Query: 61  AFYFWKGSDSHIYNVHYTMSINGKLQDGSMEIDAGNNLETFKMGSGAEEAIAVNDFQNGI 120
           AFYFWKGSDSHIYNVHYTMSINGKLQDGSMEIDAGNNLETFKMGSGAEEAIAVNDFQNGI
Sbjct: 61  AFYFWKGSDSHIYNVHYTMSINGKLQDGSMEIDAGNNLETFKMGSGAEEAIAVNDFQNGI 120

Query: 121 TGIRFAGGEKCYIKAQVKARIPEVGAVTKQSISSKLEGKIMPVKYEENSLIWVAVDQPVK 180
           TGIRFAGGEKCYIKAQVKARIPEVGAVTKQSISSKLEGKIMPVKYEENSLIWVAVDQPVK
Sbjct: 121 TGIRFAGGEKCYIKAQVKARIPEVGAVTKQSISSKLEGKIMPVKYEENSLIWVAVDQPVK 180

Query: 181 DNSFLSSKVLELCGDLPIFWLKPTYPKEIQRERREVVRKIVPTTTKRPHSGPRSNPGAGR 240
           DNSFLSSKVLELCGDLPIFWLKPTYPKEIQRERREVVRKIVPTTTKRPHSGPRSNPGAGR
Sbjct: 181 DNSFLSSKVLELCGDLPIFWLKPTYPKEIQRERREVVRKIVPTTTKRPHSGPRSNPGAGR 240

Query: 241 LNNETRPSVQEDSQAFNPDNPYHQQEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPL 300
           LNNETRPSVQEDSQAFNPDNPYH QEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPL
Sbjct: 241 LNNETRPSVQEDSQAFNPDNPYH-QEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPL 299

Query: 301 GGYYPWPYNYQGCRSACRVIMPCSWWVARILGMV 334
           GGYYPWPYNYQGCRSACRVIMPCSWWVARILGMV
Sbjct: 300 GGYYPWPYNYQGCRSACRVIMPCSWWVARILGMV 333


>gi|156627559 tenomodulin [Homo sapiens]
          Length = 317

 Score =  194 bits (494), Expect = 7e-50
 Identities = 111/311 (35%), Positives = 166/311 (53%), Gaps = 22/311 (7%)

Query: 32  KPSSPARLLKVGAVVLISGAVLLLFGAIGAFYFWKGSDSHIYNVHYTMSINGKLQDGSME 91
           K     + LK+  +V    A+ L+    G+ +FW       Y++ +T   NG+ +   ME
Sbjct: 21  KSKKICKSLKICGLVFGILALTLIVLFWGSKHFWPEVPKKAYDMEHTFYSNGEKKKIYME 80

Query: 92  IDAGNNLETFKMGSGAEEAIAVNDFQNGITGIRFAGGEKCYIKAQVKARIPEVGAVTKQS 151
           ID     E F+ G+G +E + V+DF+NG TGI F G +KC+IK Q+K  IPE     ++ 
Sbjct: 81  IDPVTRTEIFRSGNGTDETLEVHDFKNGYTGIYFVGLQKCFIKTQIKV-IPEFSEPEEEI 139

Query: 152 ISSKLEGKIMPVKYEENSLIWVAVDQPVKDNSFL-SSKVLELCGDLPIFWLKPTY--PKE 208
                E + +   + E S+IWV  ++P+++  FL +SK+LE+C ++ ++W+ PT     E
Sbjct: 140 D----ENEEITTTFFEQSVIWVPAEKPIENRDFLKNSKILEICDNVTMYWINPTLISVSE 195

Query: 209 IQRERREVVRKIVPTTTKRPHSGPRSNPGAGRLNNETRPSVQEDS-----QAFNPDNPYH 263
           +Q    E      P   K+         G  +      P V+ +      QA   + P +
Sbjct: 196 LQDFEEEGEDLHFPANEKK---------GIEQNEQWVVPQVKVEKTRHARQASEEELPIN 246

Query: 264 QQEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPLGGYYPWPYNYQGCRSACRVIMPC 323
                 + FDP LD  G CCI CRR   +C+++CEPL GYYP+PY YQG R  CRVIMPC
Sbjct: 247 DYTENGIEFDPMLDERGYCCIYCRRGNRYCRRVCEPLLGYYPYPYCYQGGRVICRVIMPC 306

Query: 324 SWWVARILGMV 334
           +WWVAR+LG V
Sbjct: 307 NWWVARMLGRV 317


>gi|149999608 surfactant protein C [Homo sapiens]
          Length = 197

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 14/199 (7%)

Query: 13  VGPDDVEFCSPPAYATLTVK----PSSPARLLKVGAVVLISGAVLLLFGAIGAFYFWKGS 68
           VG  +V   SPP Y+         P  P  L ++  VV++   VL++   +GA       
Sbjct: 3   VGSKEVLMESPPDYSAAPRGRFGIPCCPVHLKRLLIVVVV--VVLIVVVIVGALLMGLHM 60

Query: 69  DSHIYNVHYTMSINGKLQDGSMEIDAGNNLETFKMGSGAEEAIAVNDFQNGITGIRFAGG 128
                 +   MSI     +    +    +L T    S     + V D+Q  +   + A G
Sbjct: 61  SQKHTEMVLEMSIGAP--EAQQRLALSEHLVTTATFSIGSTGLVVYDYQQLLIAYKPAPG 118

Query: 129 EKCYIKAQVKARIPEVGAVTKQSISSKLEGKIMPVKYEENSLIWVAVDQPV------KDN 182
             CYI       IP + A+T++  + ++E  +        S +  A  +         D 
Sbjct: 119 TCCYIMKIAPESIPSLEALTRKVHNFQMECSLQAKPAVPTSKLGQAEGRDAGSAPSGGDP 178

Query: 183 SFLSSKVLELCGDLPIFWL 201
           +FL   V  LCG++P++++
Sbjct: 179 AFLGMAVSTLCGEVPLYYI 197


>gi|59858535 trefoil factor interactions(z) 1 [Homo sapiens]
          Length = 184

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 16/142 (11%)

Query: 67  GSDSHIYNVHYTMSI--NGKLQDGSMEIDAGNNLETFKMGSGAEEAIAVNDFQNGITGIR 124
           G  SH Y V   +S   NG     ++ ID   N     + +G+  +  + D+++G    R
Sbjct: 15  GIQSHGYEVFNIISPSNNGGNVQETVTIDNEKNTAIINIHAGSCSSTTIFDYKHGYIASR 74

Query: 125 FAGGEKCYIKAQVKARIPEVGAV-----TKQSISSKLEGKIMPVKYEENSLIWVAVDQPV 179
                 C+I       IP +  +      KQ++ +    K   VKY         ++  +
Sbjct: 75  VLSRRACFILKMDHQNIPPLNNLQWYIYEKQALDNMFSSKYTWVKYN-------PLESLI 127

Query: 180 KDNSF--LSSKVLELCGDLPIF 199
           KD  +  L S + +LC  +P++
Sbjct: 128 KDVDWFLLGSPIEKLCKHIPLY 149


>gi|38348292 coiled-coil domain containing 84 [Homo sapiens]
          Length = 332

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 9/81 (11%)

Query: 207 KEIQRERREVVRKIV-PTTTKRPHSG---PRSNPGAGRLNNETRPSVQEDSQAFNPDNPY 262
           +E+++ R+EVVR ++ P     P  G   PRS  G   +N++   S+Q+ S    P  P 
Sbjct: 156 REVEQSRQEVVRSVLEPQAVPDPEEGSSAPRSWKG---MNSQVASSLQQPSNLDLPPAPE 212

Query: 263 --HQQEGESMTFDPRLDHEGI 281
               + G S+TF    D  G+
Sbjct: 213 LDWMETGPSLTFIGHQDIPGV 233


>gi|226437579 NAC alpha domain containing [Homo sapiens]
          Length = 1562

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 206  PKEIQRERREVVRKIVPTTTKRPHSGPRSNPGAGRLNNETRPSVQEDSQAFNPDNP 261
            PK    + +++  +I+P     P SGP+S  G   L   + P  QED  +   D+P
Sbjct: 1308 PKVASMDAKDLALQILPPCQVPPPSGPQSPAGPQGL---SAPEQQEDEDSLEEDSP 1360


>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
          Length = 1522

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 206  PKEIQRERREVVRKIVPTTTKRPHSGPRSNPGAGRLNNETRPSVQEDSQAFNPDNP 261
            PK    + +++  +I+P     P SGP+S  G   L   + P  QED  +   D+P
Sbjct: 1268 PKVASMDAKDLALQILPPCQVPPPSGPQSPAGPQGL---SAPEQQEDEDSLEEDSP 1320


>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
          Length = 1522

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 206  PKEIQRERREVVRKIVPTTTKRPHSGPRSNPGAGRLNNETRPSVQEDSQAFNPDNP 261
            PK    + +++  +I+P     P SGP+S  G   L   + P  QED  +   D+P
Sbjct: 1268 PKVASMDAKDLALQILPPCQVPPPSGPQSPAGPQGL---SAPEQQEDEDSLEEDSP 1320


>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
          Length = 1562

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 206  PKEIQRERREVVRKIVPTTTKRPHSGPRSNPGAGRLNNETRPSVQEDSQAFNPDNP 261
            PK    + +++  +I+P     P SGP+S  G   L   + P  QED  +   D+P
Sbjct: 1308 PKVASMDAKDLALQILPPCQVPPPSGPQSPAGPQGL---SAPEQQEDEDSLEEDSP 1360


>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
          Length = 1522

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 206  PKEIQRERREVVRKIVPTTTKRPHSGPRSNPGAGRLNNETRPSVQEDSQAFNPDNP 261
            PK    + +++  +I+P     P SGP+S  G   L   + P  QED  +   D+P
Sbjct: 1268 PKVASMDAKDLALQILPPCQVPPPSGPQSPAGPQGL---SAPEQQEDEDSLEEDSP 1320


>gi|214832565 hypothetical protein LOC80304 isoform 2 [Homo sapiens]
          Length = 622

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 11/39 (28%), Positives = 25/39 (64%)

Query: 160 IMPVKYEENSLIWVAVDQPVKDNSFLSSKVLELCGDLPI 198
           ++ V++E++  +W     P++ + +L+S+  E+ G LPI
Sbjct: 76  LLAVQHEKHVTVWQLCPSPMESSKWLTSQTCEIRGSLPI 114


>gi|13376798 hypothetical protein LOC80304 isoform 1 [Homo sapiens]
          Length = 721

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 11/39 (28%), Positives = 25/39 (64%)

Query: 160 IMPVKYEENSLIWVAVDQPVKDNSFLSSKVLELCGDLPI 198
           ++ V++E++  +W     P++ + +L+S+  E+ G LPI
Sbjct: 76  LLAVQHEKHVTVWQLCPSPMESSKWLTSQTCEIRGSLPI 114


>gi|13569885 integral membrane protein 2C isoform 1 [Homo sapiens]
          Length = 267

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 42/194 (21%), Positives = 77/194 (39%), Gaps = 26/194 (13%)

Query: 40  LKVGAVVLISGAVLLLFGAIGAFYFWKGSDSHIYN--VHYTMSINGKLQ-----DGSMEI 92
           L +G VVL+ G V         F+  + +  + +   V Y  S++ +++     +  ++I
Sbjct: 61  LSMGMVVLLMGLVFASVYIYRYFFLAQLARDNFFRCGVLYEDSLSSQVRTQMELEEDVKI 120

Query: 93  DAGNNLETFKMG----SGAEEAIAVNDFQNGITGIRFAGGEKCYIKAQVKARIPEVGAVT 148
               N E   +      G + A  ++DFQ G+T       +KCY+  ++   I       
Sbjct: 121 YLDENYERINVPVPQFGGGDPADIIHDFQRGLTAYHDISLDKCYV-IELNTTIVLPPRNF 179

Query: 149 KQSISSKLEGKIMPVKY---EENSLIWVAVDQPVKDNSFLSSKVLELCGDLPIFWLKPTY 205
            + + +   G  +P  Y   EE     + V + V D   L S +  LC        K TY
Sbjct: 180 WELLMNVKRGTYLPQTYIIQEE-----MVVTEHVSDKEALGSFIYHLCNG------KDTY 228

Query: 206 PKEIQRERREVVRK 219
               +  RR + ++
Sbjct: 229 RLRRRATRRRINKR 242


>gi|94538357 18 kDa antrum mucosa protein [Homo sapiens]
          Length = 199

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 1/111 (0%)

Query: 89  SMEIDAGNNLETFKMGSGAEEAIAVNDFQNGITGIRFAGGEKCYIKAQVKARIPEVGAVT 148
           S+ ++  +N+      +G +   ++ D+ NG    R    + C +    K  +P + ++ 
Sbjct: 53  SVSVNNEHNVANVDNNNGWDSWNSIWDYGNGFAATRLFQKKTCIVHKMNKEVMPSIQSLD 112

Query: 149 KQSISSKLEGKIMPVKYEENSLIWVAVDQPVKDNSFLSSKVLELCGDLPIF 199
                 KL+GK  P       L++      V D S     +  +C  +P +
Sbjct: 113 ALVKEKKLQGK-GPGGPPPKGLMYSVNPNKVDDLSKFGKNIANMCRGIPTY 162


>gi|47078235 GDNF family receptor alpha 2 preproprotein [Homo
           sapiens]
          Length = 464

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 179 VKDNSFLSSKVLELCGDLPIFWLKPTYPKEIQRERREVVRKIVPTTTK--RPHSGP-RSN 235
           + D++ L + V+  C  +    LK    KE+     E+   I+P + K  +P+SGP R+ 
Sbjct: 388 LSDSTSLGTSVITTCTSVQEQGLKANNSKELSMCFTELTTNIIPGSNKVIKPNSGPSRAR 447

Query: 236 PGA 238
           P A
Sbjct: 448 PSA 450


>gi|215820619 zinc finger protein 646 [Homo sapiens]
          Length = 1832

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 9/59 (15%)

Query: 240 RLNNETRPSVQEDSQAFNPDNPY------HQQEGESMTFDPRLDHEGICCIECRRSYTH 292
           R ++  R  V E+ Q   P  P       H++E +  T    LDH    C EC R+Y H
Sbjct: 421 RAHHRPRQGVGENGQPSVPPAPLLLAETTHKEEEDPTT---TLDHRPYKCSECGRAYRH 476


>gi|60302912 integral membrane protein 2C isoform 3 [Homo sapiens]
          Length = 220

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 15/117 (12%)

Query: 106 GAEEAIAVNDFQNGITGIRFAGGEKCYIKAQVKARIPEVGAVTKQSISSKLEGKIMPVKY 165
           G + A  ++DFQ G+T       +KCY+  ++   I        + + +   G  +P  Y
Sbjct: 91  GGDPADIIHDFQRGLTAYHDISLDKCYV-IELNTTIVLPPRNFWELLMNVKRGTYLPQTY 149

Query: 166 ---EENSLIWVAVDQPVKDNSFLSSKVLELCGDLPIFWLKPTYPKEIQRERREVVRK 219
              EE     + V + V D   L S +  LC        K TY    +  RR + ++
Sbjct: 150 IIQEE-----MVVTEHVSDKEALGSFIYHLCNG------KDTYRLRRRATRRRINKR 195


>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
          Length = 2803

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 194  GDLPIFWLKPTYPKEIQ-RERREVVRKIVPTTTKRPHSGPRSNPGAGRLNNETRPSVQED 252
            G+L   +L P  P  I  R+      ++V    +R   GP +  G   + +ET P+   D
Sbjct: 2446 GELSPSFLNPPLPPSIDDRDLSTEEVRLVGRGGRRRVGGPGTTGGPCPVTDETPPTSASD 2505

Query: 253  SQAFNPDN--PYHQQEGESMTFDPRLDHE 279
            S +   D+  P   +E  S+T +  LD +
Sbjct: 2506 SGSSQSDSDVPPETEECPSITAEAALDSD 2534


>gi|13540513 oxysterol binding protein 2 isoform a [Homo sapiens]
          Length = 916

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 8/46 (17%)

Query: 50  GAVLLLFGAIGAFYFWKGSDSHIYNVHYTMSINGKL---QDGSMEI 92
           GA+ L F A G  Y W+ S S ++N+     I GKL   Q G +EI
Sbjct: 664 GAIHLEFQASGNHYVWRKSTSTVHNI-----IVGKLWIDQSGDIEI 704


>gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens]
          Length = 2852

 Score = 28.5 bits (62), Expect = 8.8
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%)

Query: 259  DNPYHQQEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPLGGYYPWPYNYQGCRSACR 318
            D  Y QQ   ++T    + H+   CIE RRS  +C  +C            YQ C +AC 
Sbjct: 2263 DTKYVQQPCVALTVYVAMCHKFHVCIEWRRS-DYCPFLCSS-------DSTYQACVTACE 2314

Query: 319  VIMPC 323
                C
Sbjct: 2315 PPKTC 2319


>gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens]
          Length = 2924

 Score = 28.5 bits (62), Expect = 8.8
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%)

Query: 259  DNPYHQQEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPLGGYYPWPYNYQGCRSACR 318
            D  Y QQ   ++T    + H+   CIE RRS  +C  +C            YQ C +AC 
Sbjct: 2335 DTKYVQQPCVALTVYVAMCHKFHVCIEWRRS-DYCPFLCSS-------DSTYQACVTACE 2386

Query: 319  VIMPC 323
                C
Sbjct: 2387 PPKTC 2391


>gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens]
          Length = 2852

 Score = 28.5 bits (62), Expect = 8.8
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%)

Query: 259  DNPYHQQEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPLGGYYPWPYNYQGCRSACR 318
            D  Y QQ   ++T    + H+   CIE RRS  +C  +C            YQ C +AC 
Sbjct: 2263 DTKYVQQPCVALTVYVAMCHKFHVCIEWRRS-DYCPFLCSS-------DSTYQACVTACE 2314

Query: 319  VIMPC 323
                C
Sbjct: 2315 PPKTC 2319


>gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens]
          Length = 2924

 Score = 28.5 bits (62), Expect = 8.8
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%)

Query: 259  DNPYHQQEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPLGGYYPWPYNYQGCRSACR 318
            D  Y QQ   ++T    + H+   CIE RRS  +C  +C            YQ C +AC 
Sbjct: 2335 DTKYVQQPCVALTVYVAMCHKFHVCIEWRRS-DYCPFLCSS-------DSTYQACVTACE 2386

Query: 319  VIMPC 323
                C
Sbjct: 2387 PPKTC 2391


>gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens]
          Length = 2852

 Score = 28.5 bits (62), Expect = 8.8
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%)

Query: 259  DNPYHQQEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPLGGYYPWPYNYQGCRSACR 318
            D  Y QQ   ++T    + H+   CIE RRS  +C  +C            YQ C +AC 
Sbjct: 2263 DTKYVQQPCVALTVYVAMCHKFHVCIEWRRS-DYCPFLCSS-------DSTYQACVTACE 2314

Query: 319  VIMPC 323
                C
Sbjct: 2315 PPKTC 2319


>gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens]
          Length = 2924

 Score = 28.5 bits (62), Expect = 8.8
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%)

Query: 259  DNPYHQQEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPLGGYYPWPYNYQGCRSACR 318
            D  Y QQ   ++T    + H+   CIE RRS  +C  +C            YQ C +AC 
Sbjct: 2335 DTKYVQQPCVALTVYVAMCHKFHVCIEWRRS-DYCPFLCSS-------DSTYQACVTACE 2386

Query: 319  VIMPC 323
                C
Sbjct: 2387 PPKTC 2391


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,992,668
Number of Sequences: 37866
Number of extensions: 667386
Number of successful extensions: 1777
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1765
Number of HSP's gapped (non-prelim): 34
length of query: 334
length of database: 18,247,518
effective HSP length: 103
effective length of query: 231
effective length of database: 14,347,320
effective search space: 3314230920
effective search space used: 3314230920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.