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Search of human proteins with 58533182
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|58533182 transmembrane protein 44 isoform b [Homo sapiens]
(428 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|58533182 transmembrane protein 44 isoform b [Homo sapiens] 862 0.0
gi|38679902 transmembrane protein 44 isoform a [Homo sapiens] 854 0.0
gi|92110021 PQ loop repeat containing 2 isoform 1 [Homo sapiens] 53 5e-07
gi|92110025 PQ loop repeat containing 2 isoform 1 [Homo sapiens] 53 5e-07
gi|92110023 PQ loop repeat containing 2 isoform 2 [Homo sapiens] 48 2e-05
gi|170784831 chromosome 1 open reading frame 9 protein isoform 2... 34 0.29
gi|7656940 chromosome 1 open reading frame 9 protein isoform 1 [... 34 0.29
gi|112789562 interferon, gamma-inducible protein 16 [Homo sapiens] 32 0.85
gi|109826564 neurofibromin isoform 1 [Homo sapiens] 32 1.1
gi|4557793 neurofibromin isoform 2 [Homo sapiens] 32 1.1
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 31 1.9
gi|38683799 ankyrin repeat domain 13 [Homo sapiens] 31 2.5
gi|7662058 tectonin beta-propeller repeat containing 2 [Homo sap... 30 5.5
gi|111548650 family with sequence similarity 170, member A [Homo... 30 5.5
gi|46447823 nuclear factor of activated T-cells, cytoplasmic, ca... 30 5.5
gi|155029548 phosphofurin acidic cluster sorting protein 2 isofo... 29 7.2
gi|155029546 phosphofurin acidic cluster sorting protein 2 isofo... 29 7.2
gi|75709194 hypothetical protein LOC29086 [Homo sapiens] 29 7.2
gi|75709192 hypothetical protein LOC29086 [Homo sapiens] 29 7.2
gi|22749415 integral membrane protein 1 [Homo sapiens] 29 7.2
gi|169214254 PREDICTED: transmembrane protein 221 [Homo sapiens] 29 9.4
gi|169213600 PREDICTED: transmembrane protein 221 [Homo sapiens] 29 9.4
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 29 9.4
gi|56549656 ARKadia-like 1 isoform b [Homo sapiens] 29 9.4
gi|49640014 ubiquitin associated and SH3 domain containing, A sh... 29 9.4
gi|9507221 ubiquitin associated and SH3 domain containing, A lon... 29 9.4
gi|52353340 olfactory receptor, family 56, subfamily B, member 1... 29 9.4
>gi|58533182 transmembrane protein 44 isoform b [Homo sapiens]
Length = 428
Score = 862 bits (2228), Expect = 0.0
Identities = 428/428 (100%), Positives = 428/428 (100%)
Query: 1 MGEAPSPAPALWDWDYLDRCFARHRVCISFGLWICASSCWIAAHALLLYLRCAQKPRQDQ 60
MGEAPSPAPALWDWDYLDRCFARHRVCISFGLWICASSCWIAAHALLLYLRCAQKPRQDQ
Sbjct: 1 MGEAPSPAPALWDWDYLDRCFARHRVCISFGLWICASSCWIAAHALLLYLRCAQKPRQDQ 60
Query: 61 SALCAACCLLTSLCDTVGALLARQLTIQVFTGAYLAAIDLVNFMFILFPVCGSKFKSNSD 120
SALCAACCLLTSLCDTVGALLARQLTIQVFTGAYLAAIDLVNFMFILFPVCGSKFKSNSD
Sbjct: 61 SALCAACCLLTSLCDTVGALLARQLTIQVFTGAYLAAIDLVNFMFILFPVCGSKFKSNSD 120
Query: 121 REARERKRRRQLRASVFALALPLSLGPCWALWVAVPKASATIRGPQRRLLASLLQENTEI 180
REARERKRRRQLRASVFALALPLSLGPCWALWVAVPKASATIRGPQRRLLASLLQENTEI
Sbjct: 121 REARERKRRRQLRASVFALALPLSLGPCWALWVAVPKASATIRGPQRRLLASLLQENTEI 180
Query: 181 LGYLLGSVAAFGSWASRIPPLSRICRGKTFPSIHLWTRLLSALAGLLYASAIVAHDQHPE 240
LGYLLGSVAAFGSWASRIPPLSRICRGKTFPSIHLWTRLLSALAGLLYASAIVAHDQHPE
Sbjct: 181 LGYLLGSVAAFGSWASRIPPLSRICRGKTFPSIHLWTRLLSALAGLLYASAIVAHDQHPE 240
Query: 241 YLLRATPWFLTSLGRAALDLAIIFLSCVMKSKMRQALGFAKEARESPDTQALLTCAEKEE 300
YLLRATPWFLTSLGRAALDLAIIFLSCVMKSKMRQALGFAKEARESPDTQALLTCAEKEE
Sbjct: 241 YLLRATPWFLTSLGRAALDLAIIFLSCVMKSKMRQALGFAKEARESPDTQALLTCAEKEE 300
Query: 301 ENQENLDWVPLTTLSHCKSLRTMTAISRYMELTIEPVQQAGCSATRLPGDGQTSAGDASL 360
ENQENLDWVPLTTLSHCKSLRTMTAISRYMELTIEPVQQAGCSATRLPGDGQTSAGDASL
Sbjct: 301 ENQENLDWVPLTTLSHCKSLRTMTAISRYMELTIEPVQQAGCSATRLPGDGQTSAGDASL 360
Query: 361 QDPPSYPPVQVIRARVSSGSSSEVSSINSDLEWDPEDVNLEGSKENVELLGSQVHQDSVR 420
QDPPSYPPVQVIRARVSSGSSSEVSSINSDLEWDPEDVNLEGSKENVELLGSQVHQDSVR
Sbjct: 361 QDPPSYPPVQVIRARVSSGSSSEVSSINSDLEWDPEDVNLEGSKENVELLGSQVHQDSVR 420
Query: 421 TAHLSDDD 428
TAHLSDDD
Sbjct: 421 TAHLSDDD 428
>gi|38679902 transmembrane protein 44 isoform a [Homo sapiens]
Length = 439
Score = 854 bits (2206), Expect = 0.0
Identities = 428/439 (97%), Positives = 428/439 (97%), Gaps = 11/439 (2%)
Query: 1 MGEAPSPAPALWDWDYLDRCFARHRVCISFGLWICASSCWIAAHALLLYLRCAQKPRQDQ 60
MGEAPSPAPALWDWDYLDRCFARHRVCISFGLWICASSCWIAAHALLLYLRCAQKPRQDQ
Sbjct: 1 MGEAPSPAPALWDWDYLDRCFARHRVCISFGLWICASSCWIAAHALLLYLRCAQKPRQDQ 60
Query: 61 SALCAACCLLTSLCDTVGALLARQLTIQVFTGAYLAAIDLVNFMFILFPVCGSKFKSNSD 120
SALCAACCLLTSLCDTVGALLARQLTIQVFTGAYLAAIDLVNFMFILFPVCGSKFKSNSD
Sbjct: 61 SALCAACCLLTSLCDTVGALLARQLTIQVFTGAYLAAIDLVNFMFILFPVCGSKFKSNSD 120
Query: 121 REARERKRRRQLRASVFALALPLSLGPCWALWVAVPKASATIRGPQRRLLASLLQENTEI 180
REARERKRRRQLRASVFALALPLSLGPCWALWVAVPKASATIRGPQRRLLASLLQENTEI
Sbjct: 121 REARERKRRRQLRASVFALALPLSLGPCWALWVAVPKASATIRGPQRRLLASLLQENTEI 180
Query: 181 LGYLLGSVAAFGSWASRIPPLSRICRGKTFPSIHLWTRLLSALAGLLYASAIVAHDQHPE 240
LGYLLGSVAAFGSWASRIPPLSRICRGKTFPSIHLWTRLLSALAGLLYASAIVAHDQHPE
Sbjct: 181 LGYLLGSVAAFGSWASRIPPLSRICRGKTFPSIHLWTRLLSALAGLLYASAIVAHDQHPE 240
Query: 241 YLLRATPWFLTSLGRAALDLAIIFLSCVMKSKMRQALGFAKEARESPDTQALLTCAEKEE 300
YLLRATPWFLTSLGRAALDLAIIFLSCVMKSKMRQALGFAKEARESPDTQALLTCAEKEE
Sbjct: 241 YLLRATPWFLTSLGRAALDLAIIFLSCVMKSKMRQALGFAKEARESPDTQALLTCAEKEE 300
Query: 301 ENQENLDWVPLTTLSHCKSLRTMTAISRYMELTIEPVQQAGCSATRLPGDGQTSAGDASL 360
ENQENLDWVPLTTLSHCKSLRTMTAISRYMELTIEPVQQAGCSATRLPGDGQTSAGDASL
Sbjct: 301 ENQENLDWVPLTTLSHCKSLRTMTAISRYMELTIEPVQQAGCSATRLPGDGQTSAGDASL 360
Query: 361 QDPPSYPPVQVIRARVSSGSSSEVSSINSDLE-----------WDPEDVNLEGSKENVEL 409
QDPPSYPPVQVIRARVSSGSSSEVSSINSDLE WDPEDVNLEGSKENVEL
Sbjct: 361 QDPPSYPPVQVIRARVSSGSSSEVSSINSDLEQKYWEALNSEQWDPEDVNLEGSKENVEL 420
Query: 410 LGSQVHQDSVRTAHLSDDD 428
LGSQVHQDSVRTAHLSDDD
Sbjct: 421 LGSQVHQDSVRTAHLSDDD 439
>gi|92110021 PQ loop repeat containing 2 isoform 1 [Homo sapiens]
Length = 291
Score = 53.1 bits (126), Expect = 5e-07
Identities = 67/263 (25%), Positives = 105/263 (39%), Gaps = 26/263 (9%)
Query: 12 WDWDYLDRCFARHRVCISFGLWICASSCWIAAHALLLYLRCAQKPRQDQSALCAACCLLT 71
W WD L C S GL + + C+ AA +++ + DQ+ + LL
Sbjct: 21 WIWDVLGECAQDGWDEASVGLGLISILCF-AASTFPQFIKAYKTGNMDQAL--SLWFLLG 77
Query: 72 SL----CDTVGALLARQLTIQVFTGAYLAAIDLVNFMFILFPVCGSKFKSN-SDREARER 126
+ C+ +G+ LA QL +Q +T Y DLV + KF++ S A
Sbjct: 78 WIGGDSCNLIGSFLADQLPLQTYTAVYYVLADLVMLTLYFY----YKFRTRPSLLSAPIN 133
Query: 127 KRRRQLRASVFALALPLSLGPCWALWVAVPKASATIRGPQRRLLASLLQENTEILGYLLG 186
L A L + GP VA P+ + R S E++G+++G
Sbjct: 134 SVLLFLMGMACATPLLSAAGP-----VAAPREAFRGRALLSVESGSKPFTRQEVIGFVIG 188
Query: 187 SVAAFGSWASRIPPLSRICRGKTFPSIHLWTRLLSALAGLLYASAIVAHDQHPE------ 240
S+++ SR+P + K+ I L L LY +++ ++PE
Sbjct: 189 SISSVLYLLSRLPQIRTNFLRKSTQGISYSLFALVMLGNTLYGLSVLL--KNPEEGQSEG 246
Query: 241 -YLLRATPWFLTSLGRAALDLAI 262
YLL PW + SLG LD I
Sbjct: 247 SYLLHHLPWLVGSLGVLLLDTII 269
>gi|92110025 PQ loop repeat containing 2 isoform 1 [Homo sapiens]
Length = 291
Score = 53.1 bits (126), Expect = 5e-07
Identities = 67/263 (25%), Positives = 105/263 (39%), Gaps = 26/263 (9%)
Query: 12 WDWDYLDRCFARHRVCISFGLWICASSCWIAAHALLLYLRCAQKPRQDQSALCAACCLLT 71
W WD L C S GL + + C+ AA +++ + DQ+ + LL
Sbjct: 21 WIWDVLGECAQDGWDEASVGLGLISILCF-AASTFPQFIKAYKTGNMDQAL--SLWFLLG 77
Query: 72 SL----CDTVGALLARQLTIQVFTGAYLAAIDLVNFMFILFPVCGSKFKSN-SDREARER 126
+ C+ +G+ LA QL +Q +T Y DLV + KF++ S A
Sbjct: 78 WIGGDSCNLIGSFLADQLPLQTYTAVYYVLADLVMLTLYFY----YKFRTRPSLLSAPIN 133
Query: 127 KRRRQLRASVFALALPLSLGPCWALWVAVPKASATIRGPQRRLLASLLQENTEILGYLLG 186
L A L + GP VA P+ + R S E++G+++G
Sbjct: 134 SVLLFLMGMACATPLLSAAGP-----VAAPREAFRGRALLSVESGSKPFTRQEVIGFVIG 188
Query: 187 SVAAFGSWASRIPPLSRICRGKTFPSIHLWTRLLSALAGLLYASAIVAHDQHPE------ 240
S+++ SR+P + K+ I L L LY +++ ++PE
Sbjct: 189 SISSVLYLLSRLPQIRTNFLRKSTQGISYSLFALVMLGNTLYGLSVLL--KNPEEGQSEG 246
Query: 241 -YLLRATPWFLTSLGRAALDLAI 262
YLL PW + SLG LD I
Sbjct: 247 SYLLHHLPWLVGSLGVLLLDTII 269
>gi|92110023 PQ loop repeat containing 2 isoform 2 [Homo sapiens]
Length = 226
Score = 47.8 bits (112), Expect = 2e-05
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 19/197 (9%)
Query: 74 CDTVGALLARQLTIQVFTGAYLAAIDLVNFMFILFPVCGSKFKSN-SDREARERKRRRQL 132
C+ +G+ LA QL +Q +T Y DLV + KF++ S A L
Sbjct: 19 CNLIGSFLADQLPLQTYTAVYYVLADLVMLTLYFY----YKFRTRPSLLSAPINSVLLFL 74
Query: 133 RASVFALALPLSLGPCWALWVAVPKASATIRGPQRRLLASLLQENTEILGYLLGSVAAFG 192
A L + GP VA P+ + R S E++G+++GS+++
Sbjct: 75 MGMACATPLLSAAGP-----VAAPREAFRGRALLSVESGSKPFTRQEVIGFVIGSISSVL 129
Query: 193 SWASRIPPLSRICRGKTFPSIHLWTRLLSALAGLLYASAIVAHDQHPE-------YLLRA 245
SR+P + K+ I L L LY +++ ++PE YLL
Sbjct: 130 YLLSRLPQIRTNFLRKSTQGISYSLFALVMLGNTLYGLSVLL--KNPEEGQSEGSYLLHH 187
Query: 246 TPWFLTSLGRAALDLAI 262
PW + SLG LD I
Sbjct: 188 LPWLVGSLGVLLLDTII 204
>gi|170784831 chromosome 1 open reading frame 9 protein isoform 2
[Homo sapiens]
Length = 1210
Score = 33.9 bits (76), Expect = 0.29
Identities = 36/142 (25%), Positives = 52/142 (36%), Gaps = 17/142 (11%)
Query: 281 KEARESPDTQALLTCAEKEEENQENLDWVPLTTLSHCKSLRTMTAISRYMELTIEPVQQA 340
+E SP T LL E+E+E+ W T C L T+ IS + E +
Sbjct: 540 EEEEASPSTVTLLGSGEQEDESS---PWFESETQIFCSELTTICCISSFSEYIYKWCSVR 596
Query: 341 GCSATRLPGDGQTSAGD-ASLQDPPSYPPVQVIRARVSSGSSSEVSSINSDLEWDPEDVN 399
+ + D L PP P + + V S E+ E+ N
Sbjct: 597 VALYRQRSRTALSKGKDYLVLAQPPLLLPAESVDVSVLQPLSGEL-----------ENTN 645
Query: 400 LEGSKENVEL--LGSQVHQDSV 419
+E E V L L S +HQD +
Sbjct: 646 IEREAETVVLGDLSSSMHQDDL 667
>gi|7656940 chromosome 1 open reading frame 9 protein isoform 1
[Homo sapiens]
Length = 1254
Score = 33.9 bits (76), Expect = 0.29
Identities = 36/142 (25%), Positives = 52/142 (36%), Gaps = 17/142 (11%)
Query: 281 KEARESPDTQALLTCAEKEEENQENLDWVPLTTLSHCKSLRTMTAISRYMELTIEPVQQA 340
+E SP T LL E+E+E+ W T C L T+ IS + E +
Sbjct: 584 EEEEASPSTVTLLGSGEQEDESS---PWFESETQIFCSELTTICCISSFSEYIYKWCSVR 640
Query: 341 GCSATRLPGDGQTSAGD-ASLQDPPSYPPVQVIRARVSSGSSSEVSSINSDLEWDPEDVN 399
+ + D L PP P + + V S E+ E+ N
Sbjct: 641 VALYRQRSRTALSKGKDYLVLAQPPLLLPAESVDVSVLQPLSGEL-----------ENTN 689
Query: 400 LEGSKENVEL--LGSQVHQDSV 419
+E E V L L S +HQD +
Sbjct: 690 IEREAETVVLGDLSSSMHQDDL 711
>gi|112789562 interferon, gamma-inducible protein 16 [Homo sapiens]
Length = 729
Score = 32.3 bits (72), Expect = 0.85
Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Query: 275 QALGFAKEARESP-DTQALLTCAEKEEENQENLDWVPLTTLSHCKSLRTMTAISRYMELT 333
+++ +E R+ P ++A T E + P ++ KS T++ ++ +M +
Sbjct: 400 KSMKLPQEQRQLPYPSEASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQ 459
Query: 334 IEPVQQAGCSATRLPGDGQTSAGDA-SLQDPPSYPPVQVIRARVSSGSSSEVSSINSDLE 392
I + PG TS G A S P PP S+ SSS ++++ L+
Sbjct: 460 ILK------EGSHFPGPFMTSIGPAESHPHTPQMPP--------STPSSSFLTTLKPRLK 505
Query: 393 WDPEDVNLEGSKEN 406
+PE+V++E S ++
Sbjct: 506 TEPEEVSIEDSAQS 519
>gi|109826564 neurofibromin isoform 1 [Homo sapiens]
Length = 2839
Score = 32.0 bits (71), Expect = 1.1
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 324 TAISRYMELTIEPVQQAGCSATRLPGDGQTSAGDASLQDPPSYPPVQVIRARVSSGSSSE 383
T I Y EL ++ + T LPG + ++ ++ L YPP +++++S ++
Sbjct: 2722 TQIPDYAELIVKFLD--ALIDTYLPGIDEETSEESLLTPTSPYPPA--LQSQLSITANLN 2777
Query: 384 VSSINSDLEWDPEDVNLEGSKENVELLGSQVHQDSVRTAH 423
+S+ + L ++ KENVEL + H +S RT H
Sbjct: 2778 LSNSMTSLATSQHSPGID--KENVELSPTTGHCNSGRTRH 2815
>gi|4557793 neurofibromin isoform 2 [Homo sapiens]
Length = 2818
Score = 32.0 bits (71), Expect = 1.1
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 324 TAISRYMELTIEPVQQAGCSATRLPGDGQTSAGDASLQDPPSYPPVQVIRARVSSGSSSE 383
T I Y EL ++ + T LPG + ++ ++ L YPP +++++S ++
Sbjct: 2701 TQIPDYAELIVKFLD--ALIDTYLPGIDEETSEESLLTPTSPYPPA--LQSQLSITANLN 2756
Query: 384 VSSINSDLEWDPEDVNLEGSKENVELLGSQVHQDSVRTAH 423
+S+ + L ++ KENVEL + H +S RT H
Sbjct: 2757 LSNSMTSLATSQHSPGID--KENVELSPTTGHCNSGRTRH 2794
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 31.2 bits (69), Expect = 1.9
Identities = 29/73 (39%), Positives = 32/73 (43%), Gaps = 16/73 (21%)
Query: 340 AGCSATRLPGDG--QTSAGDASLQDPPSYPPVQVIR------------ARVSS--GSSSE 383
A RLPG G +SA AS Q PP P VIR AR SS SSS
Sbjct: 1214 ASSEGHRLPGHGPLSSSAPGASTQPPPHLPTKLVIRHGGAGGSPSVTWARASSSLSSSSS 1273
Query: 384 VSSINSDLEWDPE 396
SS S L+ D +
Sbjct: 1274 SSSAASSLDADED 1286
>gi|38683799 ankyrin repeat domain 13 [Homo sapiens]
Length = 590
Score = 30.8 bits (68), Expect = 2.5
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 21/98 (21%)
Query: 352 QTSAGDASLQD------PPSYPP------VQVIRARVS----SGSSSEVSSINSDLEWDP 395
+TSA A L+D PP +P V+ AR++ +G S+ S++ ++E
Sbjct: 387 RTSAHFARLRDFIKLEFPPGFPVKIEIPLFHVLNARITFGNVNGCSTAEESVSQNVEGTQ 446
Query: 396 ED-----VNLEGSKENVELLGSQVHQDSVRTAHLSDDD 428
D N E + E+ S QD+ R HL D+D
Sbjct: 447 ADSASHITNFEVDQSVFEIPESYYVQDNGRNVHLQDED 484
>gi|7662058 tectonin beta-propeller repeat containing 2 [Homo sapiens]
Length = 1411
Score = 29.6 bits (65), Expect = 5.5
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 32 LWICASS---CWIAAHALLLYLRCAQKPRQDQSALCAACCLLTSLCDTVGALLARQLTIQ 88
LW+C SS C ++A + Q P + + AAC D++G + R L+
Sbjct: 1139 LWLCQSSKDLCSVSAQSAQSRPSTVQLPPEAEMRAYAACQDALWALDSLGQVFIRTLSKS 1198
Query: 89 VFTGAYLAAIDL 100
TG + +DL
Sbjct: 1199 CPTGMHWTRLDL 1210
>gi|111548650 family with sequence similarity 170, member A [Homo
sapiens]
Length = 329
Score = 29.6 bits (65), Expect = 5.5
Identities = 41/162 (25%), Positives = 62/162 (38%), Gaps = 9/162 (5%)
Query: 264 FLSCVMKSKMRQALGFAKEARESPDTQALLTCAEKEEENQENLDWVPLTTLSH---CKSL 320
+ SCV S+ G + R+SP Q+ L ++ E V L++ S C S
Sbjct: 57 YCSCVSSSRKLIHSGIQRIHRDSPQPQSPLAQVQERGETPPRSQHVSLSSYSSYKTCVSS 116
Query: 321 RTMTAISRYMELTIEPVQQAGCSATRLPGDGQTSAGDASLQDPPSYPPVQVIRARVSSGS 380
+ R M++ VQ A +T SL+ P V +
Sbjct: 117 LCVNKEERGMKIYYMQVQMNKGVAV----SWETEETLESLEKQPRMEEVTLSEVVRVGTP 172
Query: 381 SSEVSSIN--SDLEWDPEDVNLEGSKENVELLGSQVHQDSVR 420
S+VS+ N SD E E+ E E+ L GS +D+ R
Sbjct: 173 PSDVSTRNLLSDSEPSGEEKEHEERTESDSLPGSPTVEDTPR 214
>gi|46447823 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 2 interacting protein [Homo
sapiens]
Length = 419
Score = 29.6 bits (65), Expect = 5.5
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 9/113 (7%)
Query: 309 VPLTTLSHCKSLRTMTAISRYMELTIEPVQQAGCSATRLPGDGQTSAGDASLQDPPSYPP 368
V L T S + L TA E+ +EP + G A+R + + D PP P
Sbjct: 48 VDLVTDSDEEILEVATARGAADEVEVEPPEPPGPVASRDNSNSDSEGEDRRPAGPPREPV 107
Query: 369 VQVIRARVSSGSSSEV----SSINSDLEWDPEDVNL-----EGSKENVELLGS 412
+ R + G + V + S L P+D++L G +E EL S
Sbjct: 108 RRRRRLVLDPGEAPLVPVYSGKVKSSLRLIPDDLSLLKLYPPGDEEEAELADS 160
>gi|155029548 phosphofurin acidic cluster sorting protein 2 isoform
1 [Homo sapiens]
Length = 893
Score = 29.3 bits (64), Expect = 7.2
Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 8/140 (5%)
Query: 271 SKMRQALGFAKEARESPDTQALLTCAEKEEENQENLDWVPLTTLSHCKSLRTMTAISRYM 330
S++ Q + A A + P +A+LT +K + + + ++P + + +A S
Sbjct: 639 SRITQYIAGANCAHQLPIAEAMLTYKQKSPDEESSQKFIPFVGVVKVGIVEPSSATSGDS 698
Query: 331 ELTIEPVQQAGCSATRLPGDGQTSAGDASLQDPPSYPPVQVIRARVSSGSSSEVSSINSD 390
+ + + + P +A +AS PPS P V + S G +E+ + D
Sbjct: 699 D---DAAPSGSGTLSSTPPSASPAAKEAS-PTPPSSPSVSGGLSSPSQGVGAELMGLQVD 754
Query: 391 LEW---DPEDVNLEGSKENV 407
W P D + K+++
Sbjct: 755 Y-WTAAQPADRKRDAEKKDL 773
>gi|155029546 phosphofurin acidic cluster sorting protein 2 isoform
2 [Homo sapiens]
Length = 889
Score = 29.3 bits (64), Expect = 7.2
Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 8/140 (5%)
Query: 271 SKMRQALGFAKEARESPDTQALLTCAEKEEENQENLDWVPLTTLSHCKSLRTMTAISRYM 330
S++ Q + A A + P +A+LT +K + + + ++P + + +A S
Sbjct: 635 SRITQYIAGANCAHQLPIAEAMLTYKQKSPDEESSQKFIPFVGVVKVGIVEPSSATSGDS 694
Query: 331 ELTIEPVQQAGCSATRLPGDGQTSAGDASLQDPPSYPPVQVIRARVSSGSSSEVSSINSD 390
+ + + + P +A +AS PPS P V + S G +E+ + D
Sbjct: 695 D---DAAPSGSGTLSSTPPSASPAAKEAS-PTPPSSPSVSGGLSSPSQGVGAELMGLQVD 750
Query: 391 LEW---DPEDVNLEGSKENV 407
W P D + K+++
Sbjct: 751 Y-WTAAQPADRKRDAEKKDL 769
>gi|75709194 hypothetical protein LOC29086 [Homo sapiens]
Length = 329
Score = 29.3 bits (64), Expect = 7.2
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 353 TSAGDASLQDPPSYPPVQVIRARVSSGSSSEVSSINSDLEWDPEDVNLEGSKENVELLGS 412
+ AG S Q PP P VQ+ RV+ + S+ P+ + GSK N +
Sbjct: 66 SGAGPKSWQVPPPAPEVQIRTPRVNCPEKVIICLDLSEEMSLPKLESFNGSKTNALNVSQ 125
Query: 413 QVHQDSVRTAHLSD 426
++ + VRT H D
Sbjct: 126 KMIEMFVRTKHKID 139
>gi|75709192 hypothetical protein LOC29086 [Homo sapiens]
Length = 329
Score = 29.3 bits (64), Expect = 7.2
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 353 TSAGDASLQDPPSYPPVQVIRARVSSGSSSEVSSINSDLEWDPEDVNLEGSKENVELLGS 412
+ AG S Q PP P VQ+ RV+ + S+ P+ + GSK N +
Sbjct: 66 SGAGPKSWQVPPPAPEVQIRTPRVNCPEKVIICLDLSEEMSLPKLESFNGSKTNALNVSQ 125
Query: 413 QVHQDSVRTAHLSD 426
++ + VRT H D
Sbjct: 126 KMIEMFVRTKHKID 139
>gi|22749415 integral membrane protein 1 [Homo sapiens]
Length = 705
Score = 29.3 bits (64), Expect = 7.2
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 44 HALLLYLRCAQKPRQDQSALCAACCLLTSLCDTVGALLARQLTIQVFTGAYLAAID 99
HA + YLR P+Q + + L+ + TVGALL I +TG + + +D
Sbjct: 280 HAFVDYLRSKLNPQQFEVLFRSVISLVGFVLLTVGALLMLTGKISPWTGRFYSLLD 335
>gi|169214254 PREDICTED: transmembrane protein 221 [Homo sapiens]
Length = 291
Score = 28.9 bits (63), Expect = 9.4
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 4 APSPAPALWDWDYLDRCFARHRVCISFGLWICASSCWIAA---HALLLY 49
A P P DW D RH ++ GL+ C S ++AA +ALLL+
Sbjct: 100 ARGPGPRRSDWFLYDCRLLRH---VALGLFCCGISVYLAALSIYALLLF 145
>gi|169213600 PREDICTED: transmembrane protein 221 [Homo sapiens]
Length = 291
Score = 28.9 bits (63), Expect = 9.4
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 4 APSPAPALWDWDYLDRCFARHRVCISFGLWICASSCWIAA---HALLLY 49
A P P DW D RH ++ GL+ C S ++AA +ALLL+
Sbjct: 100 ARGPGPRRSDWFLYDCRLLRH---VALGLFCCGISVYLAALSIYALLLF 145
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 28.9 bits (63), Expect = 9.4
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 299 EEENQENLDWVPLTTLSHCKSLRTMTAISRYMELTIEPVQQAGCSATRLPGDGQTSAGDA 358
++ + EN D + C+S R+ T I++Y + Q++ + D ++ D+
Sbjct: 1250 QQPSDENWDLTGTRQIWPCESSRSHTTIAKYAQYQASSFQES-LQEEKESEDEESEEPDS 1308
Query: 359 SLQDPPSYPPVQVIRARVSSGSSSEVSSINSDLEWDPE 396
+ PPS P + G++ ++S W P+
Sbjct: 1309 TTGTPPSSAPDPKNHHIIKFGTNIDLSDAK---RWKPQ 1343
>gi|56549656 ARKadia-like 1 isoform b [Homo sapiens]
Length = 343
Score = 28.9 bits (63), Expect = 9.4
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 16/139 (11%)
Query: 280 AKEARESPDTQALLTCAEKEEENQENLDWVPLTTLSHCKSLRTMTAISRYMELTIEPVQQ 339
AK+ R+S D Q K +Q++ + + L + R A +Y L Q
Sbjct: 154 AKKNRQSSDKQNGRVAKVKGHRSQKHKERIRLL-----RQKREAAARKKYNLL-----QD 203
Query: 340 AGCSATRLPGDGQTSAGDASLQDPPSYPPVQV-IRARVSSG--SSSEVSSINSDLEWDPE 396
+ S + L D TS+ D + S + I + G +S + S+ N+ L E
Sbjct: 204 SSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPGHLDPGFLASDKTSAGNAPLN---E 260
Query: 397 DVNLEGSKENVELLGSQVH 415
++N+ S VE++G Q H
Sbjct: 261 EINIASSDSEVEIVGVQEH 279
>gi|49640014 ubiquitin associated and SH3 domain containing, A short
form [Homo sapiens]
Length = 623
Score = 28.9 bits (63), Expect = 9.4
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 230 SAIVAHDQHPEYLLRATPWFLTSLGRAALDLAIIFL---SCVMKSKMRQALG-------- 278
SA++ + + EY+ R T + + D +I + + S R LG
Sbjct: 512 SALMPAESYQEYMDRCTASMVQIVNTCPQDTGVILIVSHGSTLDSCTRPLLGLPPRECGD 571
Query: 279 FAKEARESPDTQALLTCAEKEEENQENLDWVPLTTLSH 316
FA+ R+ P + C E +EE + L P+ TL+H
Sbjct: 572 FAQLVRKIPSL-GMCFCEENKEEGKWELVNPPVKTLTH 608
>gi|9507221 ubiquitin associated and SH3 domain containing, A long
form [Homo sapiens]
Length = 661
Score = 28.9 bits (63), Expect = 9.4
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 230 SAIVAHDQHPEYLLRATPWFLTSLGRAALDLAIIFL---SCVMKSKMRQALG-------- 278
SA++ + + EY+ R T + + D +I + + S R LG
Sbjct: 550 SALMPAESYQEYMDRCTASMVQIVNTCPQDTGVILIVSHGSTLDSCTRPLLGLPPRECGD 609
Query: 279 FAKEARESPDTQALLTCAEKEEENQENLDWVPLTTLSH 316
FA+ R+ P + C E +EE + L P+ TL+H
Sbjct: 610 FAQLVRKIPSL-GMCFCEENKEEGKWELVNPPVKTLTH 646
>gi|52353340 olfactory receptor, family 56, subfamily B, member 1
[Homo sapiens]
Length = 324
Score = 28.9 bits (63), Expect = 9.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 210 FPSIHLWTRLLSALAGLLYASAIVAH 235
FP IH W LS LLY SA+ A+
Sbjct: 26 FPGIHSWQHWLSLPLALLYLSALAAN 51
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.133 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,571,022
Number of Sequences: 37866
Number of extensions: 702300
Number of successful extensions: 2293
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2285
Number of HSP's gapped (non-prelim): 29
length of query: 428
length of database: 18,247,518
effective HSP length: 105
effective length of query: 323
effective length of database: 14,271,588
effective search space: 4609722924
effective search space used: 4609722924
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.