Guide to the Human Genome
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Name: TMEM44 Sequence: fasta or formatted (428aa) NCBI GI: 58533182
Description:

transmembrane protein 44 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {439aa} transmembrane protein 44 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.7         50           2
 C cysteine            3.7         16           2
 D aspartate           4.9         21           3
 E glutamate           4.9         21           3
 F phenylalanine       3.0         13           1
 G glycine             4.9         21           1
 H histidine           1.9          8           1
 I isoleucine          4.2         18           2
 K lysine              2.8         12           1
 L leucine            13.8         59           3
 M methionine          1.4          6           1
 N asparagine          1.9          8           1
 P proline             5.4         23           2
 Q glutamine           4.4         19           2
 R arginine            7.0         30           3
 S serine             10.0         43           3
 T threonine           4.7         20           2
 V valine              4.9         21           1
 W tryptophan          2.6         11           1
 Y tyrosine            1.9          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 44 isoform b 
TMEM44                0.990   transmembrane protein 44 isoform a 
PQLC2                 0.033   PQ loop repeat containing 2 isoform 1 
PQLC2                 0.033   PQ loop repeat containing 2 isoform 1 
PQLC2                 0.027   PQ loop repeat containing 2 isoform 2 
C1orf9                0.011   chromosome 1 open reading frame 9 protein isoform 2...
C1orf9                0.011   chromosome 1 open reading frame 9 protein isoform 1 [...
IFI16                 0.008   interferon, gamma-inducible protein 16 
NF1                   0.008   neurofibromin isoform 1 
NF1                   0.008   neurofibromin isoform 2 
GLTSCR1               0.007   glioma tumor suppressor candidate region gene 1 [Ho...
ANKRD13A              0.007   ankyrin repeat domain 13 
TECPR2                0.006   tectonin beta-propeller repeat containing 2 
FAM170A               0.006   family with sequence similarity 170, member A [Homo...
NFATC2IP              0.006   nuclear factor of activated T-cells, cytoplasmic, ca...
PACS2                 0.005   phosphofurin acidic cluster sorting protein 2 isofo...
PACS2                 0.005   phosphofurin acidic cluster sorting protein 2 isofo...
C19orf62              0.005   hypothetical protein LOC29086 
C19orf62              0.005   hypothetical protein LOC29086 
STT3A                 0.005   integral membrane protein 1 
TMEM221               0.005   PREDICTED: transmembrane protein 221 
TMEM221               0.005   PREDICTED: transmembrane protein 221 
KDM6B                 0.005   lysine (K)-specific demethylase 6B 
C18orf25              0.005   ARKadia-like 1 isoform b 
UBASH3A               0.005   ubiquitin associated and SH3 domain containing, A sh...
UBASH3A               0.005   ubiquitin associated and SH3 domain containing, A lon...
OR56B1                0.005   olfactory receptor, family 56, subfamily B, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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