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Search of human proteins with 57863312
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|57863312 uridine-cytidine kinase 1-like 1 [Homo sapiens]
(548 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57863312 uridine-cytidine kinase 1-like 1 [Homo sapiens] 1093 0.0
gi|18699734 uridine-cytidine kinase 2 [Homo sapiens] 230 2e-60
gi|13899253 uridine-cytidine kinase 1 isoform a [Homo sapiens] 209 7e-54
gi|21450816 uracil phosphoribosyltransferase (FUR1) homolog [Hom... 154 2e-37
gi|209863022 uridine-cytidine kinase 1 isoform b [Homo sapiens] 144 3e-34
gi|24762248 integrin beta 1 binding protein 3 [Homo sapiens] 37 0.036
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 37 0.061
gi|5454102 transforming, acidic coiled-coil containing protein 3... 36 0.10
gi|8923530 nicotinamide riboside kinase 1 isoform 1 [Homo sapiens] 33 0.67
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 33 0.88
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 33 0.88
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 33 0.88
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 33 0.88
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 33 0.88
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ... 33 0.88
gi|189027124 nicotinamide riboside kinase 1 isoform 2 [Homo sapi... 33 0.88
gi|223468630 component of oligomeric golgi complex 6 isoform 2 [... 32 1.5
gi|33457344 component of oligomeric golgi complex 6 isoform 1 [H... 32 1.5
gi|46094081 development and differentiation enhancing factor 1 [... 32 1.5
gi|51317366 myosin XVIIIB [Homo sapiens] 32 2.0
gi|224586880 Ras protein-specific guanine nucleotide-releasing f... 31 2.6
gi|24797099 Ras protein-specific guanine nucleotide-releasing fa... 31 2.6
gi|24797101 Ras protein-specific guanine nucleotide-releasing fa... 31 2.6
gi|18959210 WIRE protein [Homo sapiens] 31 2.6
gi|238859653 pleckstrin homology domain containing family A memb... 31 3.3
gi|238859651 pleckstrin homology domain containing family A memb... 31 3.3
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 31 3.3
gi|27477122 intestinal cell kinase [Homo sapiens] 31 3.3
gi|7662388 intestinal cell kinase [Homo sapiens] 31 3.3
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 31 3.3
>gi|57863312 uridine-cytidine kinase 1-like 1 [Homo sapiens]
Length = 548
Score = 1093 bits (2826), Expect = 0.0
Identities = 548/548 (100%), Positives = 548/548 (100%)
Query: 1 MAAPPARADADPSPTSPPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRSPRKR 60
MAAPPARADADPSPTSPPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRSPRKR
Sbjct: 1 MAAPPARADADPSPTSPPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRSPRKR 60
Query: 61 TTSQCKSEPPLLRTSKRTIYTAGRPPWYNEHGTQSKEAFAIGLGGGSASGKTTVARMIIE 120
TTSQCKSEPPLLRTSKRTIYTAGRPPWYNEHGTQSKEAFAIGLGGGSASGKTTVARMIIE
Sbjct: 61 TTSQCKSEPPLLRTSKRTIYTAGRPPWYNEHGTQSKEAFAIGLGGGSASGKTTVARMIIE 120
Query: 121 ALDVPWVVLLSMDSFYKVLTEQQQEQAAHNNFNFDHPDAFDFDLIISTLKKLKQGKSVKV 180
ALDVPWVVLLSMDSFYKVLTEQQQEQAAHNNFNFDHPDAFDFDLIISTLKKLKQGKSVKV
Sbjct: 121 ALDVPWVVLLSMDSFYKVLTEQQQEQAAHNNFNFDHPDAFDFDLIISTLKKLKQGKSVKV 180
Query: 181 PIYDFTTHSRKKDWKTLYGANVIIFEGIMAFADKTLLELLDMKIFVDTDSDIRLVRRLRR 240
PIYDFTTHSRKKDWKTLYGANVIIFEGIMAFADKTLLELLDMKIFVDTDSDIRLVRRLRR
Sbjct: 181 PIYDFTTHSRKKDWKTLYGANVIIFEGIMAFADKTLLELLDMKIFVDTDSDIRLVRRLRR 240
Query: 241 DISERGRDIEGVIKQYNKFVKPSFDQYIQPTMRLADIVVPRGSGNTVAIDLIVQHVHSQL 300
DISERGRDIEGVIKQYNKFVKPSFDQYIQPTMRLADIVVPRGSGNTVAIDLIVQHVHSQL
Sbjct: 241 DISERGRDIEGVIKQYNKFVKPSFDQYIQPTMRLADIVVPRGSGNTVAIDLIVQHVHSQL 300
Query: 301 EERELSVRAALASAHQCHPLPRTLSVLKSTPQVRGMHTIIRDKETSRDEFIFYSKRLMRL 360
EERELSVRAALASAHQCHPLPRTLSVLKSTPQVRGMHTIIRDKETSRDEFIFYSKRLMRL
Sbjct: 301 EERELSVRAALASAHQCHPLPRTLSVLKSTPQVRGMHTIIRDKETSRDEFIFYSKRLMRL 360
Query: 361 LIEHALSFLPFQDCVVQTPQGQDYAGKCYAGKQITGVSILRAGETMEPALRAVCKDVRIG 420
LIEHALSFLPFQDCVVQTPQGQDYAGKCYAGKQITGVSILRAGETMEPALRAVCKDVRIG
Sbjct: 361 LIEHALSFLPFQDCVVQTPQGQDYAGKCYAGKQITGVSILRAGETMEPALRAVCKDVRIG 420
Query: 421 TILIQTNQLTGEPELHYLRLPKDISDDHVILMDCTVSTGAAAMMAVRVLLDHDVPEDKIF 480
TILIQTNQLTGEPELHYLRLPKDISDDHVILMDCTVSTGAAAMMAVRVLLDHDVPEDKIF
Sbjct: 421 TILIQTNQLTGEPELHYLRLPKDISDDHVILMDCTVSTGAAAMMAVRVLLDHDVPEDKIF 480
Query: 481 LLSLLMAEMGVHSVAYAFPRVRIITTAVDKRVNDLFRIIPGIGNFGDRYFGTDAVPDGSD 540
LLSLLMAEMGVHSVAYAFPRVRIITTAVDKRVNDLFRIIPGIGNFGDRYFGTDAVPDGSD
Sbjct: 481 LLSLLMAEMGVHSVAYAFPRVRIITTAVDKRVNDLFRIIPGIGNFGDRYFGTDAVPDGSD 540
Query: 541 EEEVAYTG 548
EEEVAYTG
Sbjct: 541 EEEVAYTG 548
>gi|18699734 uridine-cytidine kinase 2 [Homo sapiens]
Length = 261
Score = 230 bits (587), Expect = 2e-60
Identities = 111/219 (50%), Positives = 161/219 (73%), Gaps = 7/219 (3%)
Query: 89 NEHGTQSKEAFAIGLGGGSASGKTTVARMIIEAL---DVPW----VVLLSMDSFYKVLTE 141
N E F IG+ GG+ASGK++V I++ L +V + VV+LS DSFY+VLT
Sbjct: 11 NHQQPNGGEPFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQDSFYRVLTS 70
Query: 142 QQQEQAAHNNFNFDHPDAFDFDLIISTLKKLKQGKSVKVPIYDFTTHSRKKDWKTLYGAN 201
+Q+ +A FNFDHPDAFD +LI+ TLK++ +GK+V++P+YDF +HSRK++ T+Y A+
Sbjct: 71 EQKAKALKGQFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPAD 130
Query: 202 VIIFEGIMAFADKTLLELLDMKIFVDTDSDIRLVRRLRRDISERGRDIEGVIKQYNKFVK 261
V++FEGI+AF + + +L MK+FVDTD+D RL RR+ RDISERGRD+E ++ QY FVK
Sbjct: 131 VVLFEGILAFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVK 190
Query: 262 PSFDQYIQPTMRLADIVVPRGSGNTVAIDLIVQHVHSQL 300
P+F+++ PT + AD+++PRG+ N VAI+LIVQH+ L
Sbjct: 191 PAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDIL 229
>gi|13899253 uridine-cytidine kinase 1 isoform a [Homo sapiens]
Length = 277
Score = 209 bits (531), Expect = 7e-54
Identities = 103/209 (49%), Positives = 146/209 (69%), Gaps = 8/209 (3%)
Query: 99 FAIGLGGGSASGKTTVARMIIEALDVPWV-------VLLSMDSFYKVLTEQQQEQAAHNN 151
F IG+ GG+ASGK+TV I+E L V V+LS D FYKVLT +Q+ +A
Sbjct: 24 FLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQ 83
Query: 152 FNFDHPDAFDFDLIISTLKKLKQGKSVKVPIYDFTTHSRKKDWKTLYGANVIIFEGIMAF 211
+NFDHPDAFD DL+ TLK + +GK+V+VP YDF THSR + +Y A+V++FEGI+ F
Sbjct: 84 YNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILVF 143
Query: 212 ADKTLLELLDMKIFVDTDSDIRLVRRLRRDISERGRDIEGVIKQYNKFVKPSFDQYIQPT 271
+ + ++ +++FVDTDSD+RL RR+ RD+ RGRD+E ++ QY FVKP+F+++ PT
Sbjct: 144 YSQEIRDMFHLRLFVDTDSDVRLSRRVLRDV-RRGRDLEQILTQYTTFVKPAFEEFCLPT 202
Query: 272 MRLADIVVPRGSGNTVAIDLIVQHVHSQL 300
+ AD+++PRG N VAI+LIVQH+ L
Sbjct: 203 KKYADVIIPRGVDNMVAINLIVQHIQDIL 231
>gi|21450816 uracil phosphoribosyltransferase (FUR1) homolog [Homo
sapiens]
Length = 309
Score = 154 bits (389), Expect = 2e-37
Identities = 97/252 (38%), Positives = 141/252 (55%), Gaps = 23/252 (9%)
Query: 282 GSGNTVAIDLIVQHVHSQLEERELSVRAALASAHQCHPLPRTLSVLKSTPQVRGMHTIIR 341
GSG++ + D + S LE+ ELS + L +L Q+R + TIIR
Sbjct: 81 GSGDSSSYDAPAGN--SFLEDCELS-----------RQIGAQLKLLPMNDQIRELQTIIR 127
Query: 342 DKETSRDEFIFYSKRLMRLLIEHALSFLPFQDCVVQTPQGQDYAGKCYAGKQITGVSILR 401
DK SR +F+F + RL+RL++E L+ LP+++C+V TP G Y G + K GVSI+R
Sbjct: 128 DKTASRGDFMFSADRLIRLVVEEGLNQLPYKECMVTTPTGYKYEGVKFE-KGNCGVSIMR 186
Query: 402 AGETMEPALRAVCKDVRIGTILIQTNQLTGEPELHYLRLPKDISDDHVILMDCTVSTGAA 461
+GE ME LR C+ +RIG ILIQ+++ T +++Y + P DI V+LM +STG
Sbjct: 187 SGEAMEQGLRDCCRSIRIGKILIQSDEETQRAKVYYAKFPPDIYRRKVLLMYPILSTGNT 246
Query: 462 AMMAVRVLLDHDVPEDKIFLLSLLMAEMGVHSVAYAFPRVRIITTAVDKRVNDLFRIIPG 521
+ AV+VL++H V I LLSL G S+ FP + I+TT V + P
Sbjct: 247 VIEAVKVLIEHGVQPSVIILLSLFSTPHGAKSIIQEFPEITILTTEVHP-------VAP- 298
Query: 522 IGNFGDRYFGTD 533
+FG +YFGTD
Sbjct: 299 -THFGQKYFGTD 309
>gi|209863022 uridine-cytidine kinase 1 isoform b [Homo sapiens]
Length = 201
Score = 144 bits (362), Expect = 3e-34
Identities = 72/146 (49%), Positives = 100/146 (68%), Gaps = 7/146 (4%)
Query: 99 FAIGLGGGSASGKTTVARMIIEALDVPWV-------VLLSMDSFYKVLTEQQQEQAAHNN 151
F IG+ GG+ASGK+TV I+E L V V+LS D FYKVLT +Q+ +A
Sbjct: 24 FLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQ 83
Query: 152 FNFDHPDAFDFDLIISTLKKLKQGKSVKVPIYDFTTHSRKKDWKTLYGANVIIFEGIMAF 211
+NFDHPDAFD DL+ TLK + +GK+V+VP YDF THSR + +Y A+V++FEGI+ F
Sbjct: 84 YNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILVF 143
Query: 212 ADKTLLELLDMKIFVDTDSDIRLVRR 237
+ + ++ +++FVDTDSD+RL RR
Sbjct: 144 YSQEIRDMFHLRLFVDTDSDVRLSRR 169
>gi|24762248 integrin beta 1 binding protein 3 [Homo sapiens]
Length = 230
Score = 37.4 bits (85), Expect = 0.036
Identities = 26/127 (20%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 101 IGLGGGSASGKTTVARMIIEALDVPWVVLLSMDSFYKVLTEQQQEQAAHNNF-NFDHPDA 159
+G+GG + GKTT+ ++ AL P ++ D F+K Q Q + F +D ++
Sbjct: 5 VGIGGMTNGGKTTLTNSLLRAL--PNCCVIHQDDFFK---PQDQIAVGEDGFKQWDVLES 59
Query: 160 FDFDLIISTLKKLKQGKSVKVPIYDFTTHSRKKDWKTLYGANVIIFEGIMAFADKTLLEL 219
D + ++ T++ + + D ++++ EG + ++ K L++L
Sbjct: 60 LDMEAMLDTVQAWLSSPQKFARAHGVSVQPEASD------THILLLEGFLLYSYKPLVDL 113
Query: 220 LDMKIFV 226
+ F+
Sbjct: 114 YSRRYFL 120
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 36.6 bits (83), Expect = 0.061
Identities = 21/67 (31%), Positives = 26/67 (38%)
Query: 4 PPARADADPSPTSPPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRSPRKRTTS 63
PP R PSP PP R TP + + R + S R PP+ SP
Sbjct: 553 PPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKR 612
Query: 64 QCKSEPP 70
+ S PP
Sbjct: 613 RTASPPP 619
>gi|5454102 transforming, acidic coiled-coil containing protein 3
[Homo sapiens]
Length = 838
Score = 35.8 bits (81), Expect = 0.10
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 2 AAPPARADAD-----PSPTSPPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRS 56
+ P A AD D SP S +PG+ + E A E+ ++ SLDR + P
Sbjct: 144 SGPGALADLDCSSSSQSPGSSENQMVSPGKVSGSPEQAVEENLSSYSLDRRVTPASETLE 203
Query: 57 PRKRTTSQCKSEPP 70
RT SQ K+E P
Sbjct: 204 DPCRTESQHKAETP 217
>gi|8923530 nicotinamide riboside kinase 1 isoform 1 [Homo sapiens]
Length = 199
Score = 33.1 bits (74), Expect = 0.67
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 97 EAFAIGLGGGSASGKTTVARMIIEALDVPWVVLLSMDSFYKVLTEQQQEQAAHNNFNFDH 156
+ F IG+ G + SGKTT+A+ + + L P ++S D F+K E + E + +D
Sbjct: 2 KTFIIGISGVTNSGKTTLAKNLQKHL--PNCSVISQDDFFK--PESEIETDKNGFLQYDV 57
Query: 157 PDAFDFDLIISTLKKLKQGKSVKVPIYDFTTHSRKKDWKTLYGANVIIFEGIMAFADKTL 216
+A + + ++S + + V D ++ ++I EG + F K L
Sbjct: 58 LEALNMEKMMSAISCWMESARHSVV---------STDQESAEEIPILIIEGFLLFNYKPL 108
Query: 217 LELLDMKIFV 226
+ + F+
Sbjct: 109 DTIWNRSYFL 118
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 32.7 bits (73), Expect = 0.88
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 8 ADADPSPTSPPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRSPRKRTTSQCKS 67
A A P T P A+ G++ E S+++ E+ + E P +G++P+ R S
Sbjct: 310 APAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKP--SGKAPQVRAASAPAK 367
Query: 68 EPP 70
E P
Sbjct: 368 ESP 370
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 32.7 bits (73), Expect = 0.88
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 8 ADADPSPTSPPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRSPRKRTTSQCKS 67
A A P T P A+ G++ E S+++ E+ + E P +G++P+ R S
Sbjct: 387 APAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKP--SGKAPQVRAASAPAK 444
Query: 68 EPP 70
E P
Sbjct: 445 ESP 447
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 32.7 bits (73), Expect = 0.88
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 8 ADADPSPTSPPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRSPRKRTTSQCKS 67
A A P T P A+ G++ E S+++ E+ + E P +G++P+ R S
Sbjct: 387 APAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKP--SGKAPQVRAASAPAK 444
Query: 68 EPP 70
E P
Sbjct: 445 ESP 447
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b
[Homo sapiens]
Length = 1411
Score = 32.7 bits (73), Expect = 0.88
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 8 ADADPSPTSPPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRSPRKRTTSQCKS 67
A A P T P A+ G++ E S+++ E+ + E P +G++P+ R S
Sbjct: 310 APAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKP--SGKAPQVRAASAPAK 367
Query: 68 EPP 70
E P
Sbjct: 368 ESP 370
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
[Homo sapiens]
Length = 1450
Score = 32.7 bits (73), Expect = 0.88
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 8 ADADPSPTSPPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRSPRKRTTSQCKS 67
A A P T P A+ G++ E S+++ E+ + E P +G++P+ R S
Sbjct: 387 APAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKP--SGKAPQVRAASAPAK 444
Query: 68 EPP 70
E P
Sbjct: 445 ESP 447
>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
[Homo sapiens]
Length = 958
Score = 32.7 bits (73), Expect = 0.88
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 8 ADADPSPTSPPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRSPRKRTTSQCKS 67
A A P T P A+ G++ E S+++ E+ + E P +G++P+ R S
Sbjct: 387 APAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKP--SGKAPQVRAASAPAK 444
Query: 68 EPP 70
E P
Sbjct: 445 ESP 447
>gi|189027124 nicotinamide riboside kinase 1 isoform 2 [Homo
sapiens]
Length = 175
Score = 32.7 bits (73), Expect = 0.88
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 97 EAFAIGLGGGSASGKTTVARMIIEALDVPWVVLLSMDSFYKVLTEQQQEQAAHNNFNFDH 156
+ F IG+ G + SGKTT+A+ + + L P ++S D F+K E + E + +D
Sbjct: 2 KTFIIGISGVTNSGKTTLAKNLQKHL--PNCSVISQDDFFK--PESEIETDKNGFLQYDV 57
Query: 157 PDAFDFDLIISTL 169
+A + + ++S +
Sbjct: 58 LEALNMEKMMSAI 70
>gi|223468630 component of oligomeric golgi complex 6 isoform 2
[Homo sapiens]
Length = 615
Score = 32.0 bits (71), Expect = 1.5
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Query: 213 DKTLLELLDMKIFVDTDSDIRLVRRLRRDISERGRDIEGVIKQYNKFVKPSFDQYIQPTM 272
DK +LE L ++ +R R LR DI + I K VK + +
Sbjct: 50 DKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELESISEDVQ 109
Query: 273 RLA----DIVVPRGSGNTVAIDLIVQHVHSQLEERELSVRAALASA 314
++ D+ + DLIV+ Q E ++L +RA +A A
Sbjct: 110 AMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADA 155
>gi|33457344 component of oligomeric golgi complex 6 isoform 1 [Homo
sapiens]
Length = 657
Score = 32.0 bits (71), Expect = 1.5
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Query: 213 DKTLLELLDMKIFVDTDSDIRLVRRLRRDISERGRDIEGVIKQYNKFVKPSFDQYIQPTM 272
DK +LE L ++ +R R LR DI + I K VK + +
Sbjct: 50 DKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELESISEDVQ 109
Query: 273 RLA----DIVVPRGSGNTVAIDLIVQHVHSQLEERELSVRAALASA 314
++ D+ + DLIV+ Q E ++L +RA +A A
Sbjct: 110 AMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADA 155
>gi|46094081 development and differentiation enhancing factor 1
[Homo sapiens]
Length = 1129
Score = 32.0 bits (71), Expect = 1.5
Identities = 37/103 (35%), Positives = 42/103 (40%), Gaps = 16/103 (15%)
Query: 13 SPTSPPT-ARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRSPRKRTTSQCKSEPPL 71
SPTSP T A P R A K T P+ T S T S+ K PP
Sbjct: 782 SPTSPTTEAPPLPPRNAGKGPTGPPSTL----------PLSTQTSSGSSTLSK-KRPPPP 830
Query: 72 LRTSKRTIYTAGRPPWYNEHGTQSKEAFAIGLGGG-SASGKTT 113
KRT+ PP HG +K A G GG S+S KTT
Sbjct: 831 PPGHKRTL---SDPPSPLPHGPPNKGAVPWGNDGGPSSSSKTT 870
>gi|51317366 myosin XVIIIB [Homo sapiens]
Length = 2567
Score = 31.6 bits (70), Expect = 2.0
Identities = 32/111 (28%), Positives = 42/111 (37%), Gaps = 11/111 (9%)
Query: 9 DADPSPTSPPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTG--RSPRKRTTSQCK 66
DA P TSPP ++ E S T C +++ E L TG P + T + K
Sbjct: 174 DAPPCKTSPPATDTGKEKKGETSRTPCGSQASTEILAPKAEKTRTGGLGDPGQGTVALKK 233
Query: 67 SEPPL------LRTSKRTIYTAGRPPWYNEHGTQSKEAFAIGLGGGSASGK 111
E L T K T P + GT+ + A G G G GK
Sbjct: 234 GEEGQSIVGKGLGTPKTTELKEAEPQGKDRQGTRPQ---AQGPGEGVRPGK 281
>gi|224586880 Ras protein-specific guanine nucleotide-releasing
factor 1 isoform 3 [Homo sapiens]
Length = 1257
Score = 31.2 bits (69), Expect = 2.6
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 3/123 (2%)
Query: 5 PARADADPSPTSPPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRSPRKRTTSQ 64
P D P P+A + E + D++ ++ D P + +P K ++
Sbjct: 797 PDEGDTTPEKPEDPSALSKQSSEVSMREESDIDQNQSDDGDTETSPTKSPTTP-KSVKNK 855
Query: 65 CKSEPPLLRTSKRTIYTAGRPPWYNEHGTQSKEAFAIGLGGGS--ASGKTTVARMIIEAL 122
SE PL + + T+ R N + AFAI G + K RM + +
Sbjct: 856 NSSEFPLFSYNNGVVMTSCRELDNNRSALSAASAFAIATAGANEGTPNKEKYRRMSLASA 915
Query: 123 DVP 125
P
Sbjct: 916 GFP 918
>gi|24797099 Ras protein-specific guanine nucleotide-releasing
factor 1 isoform 1 [Homo sapiens]
Length = 1273
Score = 31.2 bits (69), Expect = 2.6
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 3/123 (2%)
Query: 5 PARADADPSPTSPPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRSPRKRTTSQ 64
P D P P+A + E + D++ ++ D P + +P K ++
Sbjct: 813 PDEGDTTPEKPEDPSALSKQSSEVSMREESDIDQNQSDDGDTETSPTKSPTTP-KSVKNK 871
Query: 65 CKSEPPLLRTSKRTIYTAGRPPWYNEHGTQSKEAFAIGLGGGS--ASGKTTVARMIIEAL 122
SE PL + + T+ R N + AFAI G + K RM + +
Sbjct: 872 NSSEFPLFSYNNGVVMTSCRELDNNRSALSAASAFAIATAGANEGTPNKEKYRRMSLASA 931
Query: 123 DVP 125
P
Sbjct: 932 GFP 934
>gi|24797101 Ras protein-specific guanine nucleotide-releasing
factor 1 isoform 2 [Homo sapiens]
Length = 489
Score = 31.2 bits (69), Expect = 2.6
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 3/123 (2%)
Query: 5 PARADADPSPTSPPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRSPRKRTTSQ 64
P D P P+A + E + D++ ++ D P + +P K ++
Sbjct: 29 PDEGDTTPEKPEDPSALSKQSSEVSMREESDIDQNQSDDGDTETSPTKSPTTP-KSVKNK 87
Query: 65 CKSEPPLLRTSKRTIYTAGRPPWYNEHGTQSKEAFAIGLGGGS--ASGKTTVARMIIEAL 122
SE PL + + T+ R N + AFAI G + K RM + +
Sbjct: 88 NSSEFPLFSYNNGVVMTSCRELDNNRSALSAASAFAIATAGANEGTPNKEKYRRMSLASA 147
Query: 123 DVP 125
P
Sbjct: 148 GFP 150
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 31.2 bits (69), Expect = 2.6
Identities = 30/87 (34%), Positives = 32/87 (36%), Gaps = 12/87 (13%)
Query: 3 APPARADADPSPTS---PPTARDTPGRQAEKSETACEDRSNAESLDRLLPPVGTGRSPRK 59
APP A PS S PP ARD P R A R+ A PP R
Sbjct: 295 APPPPTSASPSLLSNRPPPPARDPPSRGAAPPPPPPVIRNGARDAP---PPPPPYRMHGS 351
Query: 60 RTTSQCKSEPPLLRTSKRTIYTAGRPP 86
S+ K PP RT AG PP
Sbjct: 352 EPPSRGKPPPPPSRT------PAGPPP 372
>gi|238859653 pleckstrin homology domain containing family A member
4 isoform 2 [Homo sapiens]
Length = 583
Score = 30.8 bits (68), Expect = 3.3
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 12 PSPTSPPTARDTPGRQ--AEKSETACEDRSNAE-SLDRLLPPVGTGRSPRKRTTSQCKSE 68
PSP S P R P R+ A +TA R + S + PP+ G P+++T S+
Sbjct: 240 PSPLSLPRPRSAPARRPPAPSGDTAPPARPHTPLSRIDVRPPLDWG--PQRQTLSR---- 293
Query: 69 PPLLRTSKRTIYTAGRPPWYNEHGTQ 94
PP R + G+PP +H +Q
Sbjct: 294 PPTPRRGPPSEAGGGKPPRSPQHWSQ 319
>gi|238859651 pleckstrin homology domain containing family A member
4 isoform 1 [Homo sapiens]
Length = 779
Score = 30.8 bits (68), Expect = 3.3
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 12 PSPTSPPTARDTPGRQ--AEKSETACEDRSNAE-SLDRLLPPVGTGRSPRKRTTSQCKSE 68
PSP S P R P R+ A +TA R + S + PP+ G P+++T S+
Sbjct: 240 PSPLSLPRPRSAPARRPPAPSGDTAPPARPHTPLSRIDVRPPLDWG--PQRQTLSR---- 293
Query: 69 PPLLRTSKRTIYTAGRPPWYNEHGTQ 94
PP R + G+PP +H +Q
Sbjct: 294 PPTPRRGPPSEAGGGKPPRSPQHWSQ 319
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 30.8 bits (68), Expect = 3.3
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 6 ARADADPSPTSPPTARDTPGRQAEKS----ET---ACEDRSNAESLDRLLPPVGTGRSPR 58
A A D TS PT+R T GR+ S ET A + + S D+ + P T R+ R
Sbjct: 1498 ASASTDQPVTSEPTSRTTRGRKNRSSVKTPETVVPAAPELQPSTSTDQPVTPEPTSRATR 1557
Query: 59 KRTTSQCKSEP 69
RT P
Sbjct: 1558 GRTNRSSVKTP 1568
>gi|27477122 intestinal cell kinase [Homo sapiens]
Length = 632
Score = 30.8 bits (68), Expect = 3.3
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 8 ADADPSPTSPPTAR-DTPGRQAEKSETACEDRSNAESLDRLLP--PVGTGRSPRKRTTSQ 64
AD D SP +R D ++ + +T C ES+ L P PVGTG S +T+ Q
Sbjct: 419 ADLDDLDFSPSLSRIDLKNKKRQSDDTLCR----FESVLDLKPSEPVGTGNSAPTQTSYQ 474
Query: 65 CKSEPPLLRTSKR 77
+ P L +K+
Sbjct: 475 RRDTPTLRSAAKQ 487
>gi|7662388 intestinal cell kinase [Homo sapiens]
Length = 632
Score = 30.8 bits (68), Expect = 3.3
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 8 ADADPSPTSPPTAR-DTPGRQAEKSETACEDRSNAESLDRLLP--PVGTGRSPRKRTTSQ 64
AD D SP +R D ++ + +T C ES+ L P PVGTG S +T+ Q
Sbjct: 419 ADLDDLDFSPSLSRIDLKNKKRQSDDTLCR----FESVLDLKPSEPVGTGNSAPTQTSYQ 474
Query: 65 CKSEPPLLRTSKR 77
+ P L +K+
Sbjct: 475 RRDTPTLRSAAKQ 487
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 30.8 bits (68), Expect = 3.3
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 15/79 (18%)
Query: 4 PPARADADPSPTSPPTARDTPGRQA--------------EKSETACEDRSNAESLDRLLP 49
PPAR PSP S P+++ GR A +A R R P
Sbjct: 356 PPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAP 415
Query: 50 PVGTGRS-PRKRTTSQCKS 67
P G+ RS R R++S S
Sbjct: 416 PRGSSRSLSRARSSSDSGS 434
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,522,713
Number of Sequences: 37866
Number of extensions: 922848
Number of successful extensions: 3658
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 3623
Number of HSP's gapped (non-prelim): 67
length of query: 548
length of database: 18,247,518
effective HSP length: 107
effective length of query: 441
effective length of database: 14,195,856
effective search space: 6260372496
effective search space used: 6260372496
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.