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Search of human proteins with 5730059
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5730059 fibroblast growth factor receptor substrate 3 [Homo
sapiens]
(492 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5730059 fibroblast growth factor receptor substrate 3 [Homo s... 1042 0.0
gi|110347414 fibroblast growth factor receptor substrate 2 [Homo... 441 e-124
gi|110347408 fibroblast growth factor receptor substrate 2 [Homo... 441 e-124
gi|4503357 docking protein 1 [Homo sapiens] 62 2e-09
gi|47575849 docking protein 6 [Homo sapiens] 60 6e-09
gi|221554537 docking protein 3 isoform 1 [Homo sapiens] 59 1e-08
gi|41406050 docking protein 2 [Homo sapiens] 58 2e-08
gi|20070302 docking protein 4 [Homo sapiens] 56 9e-08
gi|29544726 docking protein 5 [Homo sapiens] 54 2e-07
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 47 4e-05
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 40 0.004
gi|111185957 downstream of tyrosine kinase 7 [Homo sapiens] 40 0.006
gi|149944516 tet oncogene family member 3 [Homo sapiens] 38 0.024
gi|56117844 synovial sarcoma translocation, chromosome 18 isofor... 37 0.053
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 37 0.053
gi|153792074 proline rich 12 [Homo sapiens] 35 0.12
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 35 0.16
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 35 0.20
gi|150170670 piccolo isoform 2 [Homo sapiens] 34 0.35
gi|150378539 piccolo isoform 1 [Homo sapiens] 34 0.35
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 33 0.45
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 33 0.45
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 33 0.45
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 33 0.59
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 33 0.77
gi|222352183 neural precursor cell expressed, developmentally do... 33 0.77
gi|21361472 neural precursor cell expressed, developmentally dow... 33 0.77
gi|222352094 neural precursor cell expressed, developmentally do... 33 0.77
gi|222352092 neural precursor cell expressed, developmentally do... 33 0.77
gi|222352090 neural precursor cell expressed, developmentally do... 33 0.77
>gi|5730059 fibroblast growth factor receptor substrate 3 [Homo
sapiens]
Length = 492
Score = 1042 bits (2694), Expect = 0.0
Identities = 492/492 (100%), Positives = 492/492 (100%)
Query: 1 MGSCCSCLNRDSVPDNHPTKFKVTNVDDEGVELGSGVMELTQSELVLHLHRREAVRWPYL 60
MGSCCSCLNRDSVPDNHPTKFKVTNVDDEGVELGSGVMELTQSELVLHLHRREAVRWPYL
Sbjct: 1 MGSCCSCLNRDSVPDNHPTKFKVTNVDDEGVELGSGVMELTQSELVLHLHRREAVRWPYL 60
Query: 61 CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLMQCNSINVMEEPVIIT 120
CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLMQCNSINVMEEPVIIT
Sbjct: 61 CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLMQCNSINVMEEPVIIT 120
Query: 121 RNSHPAELDLPRAPQPPNALGYTVSSFSNGCPGEGPRFSAPRRLSTSSLRHPSLGEESTH 180
RNSHPAELDLPRAPQPPNALGYTVSSFSNGCPGEGPRFSAPRRLSTSSLRHPSLGEESTH
Sbjct: 121 RNSHPAELDLPRAPQPPNALGYTVSSFSNGCPGEGPRFSAPRRLSTSSLRHPSLGEESTH 180
Query: 181 ALIAPDEQSHTYVNTPASEDDHRRGRHCLQPLPEGQAPFLPQARGPDQRDPQVFLQPGQV 240
ALIAPDEQSHTYVNTPASEDDHRRGRHCLQPLPEGQAPFLPQARGPDQRDPQVFLQPGQV
Sbjct: 181 ALIAPDEQSHTYVNTPASEDDHRRGRHCLQPLPEGQAPFLPQARGPDQRDPQVFLQPGQV 240
Query: 241 KFVLGPTPARRHMVKCQGLCPSLHDPPHHNNNNEAPSECPAQPKCTYENVTGGLWRGAGW 300
KFVLGPTPARRHMVKCQGLCPSLHDPPHHNNNNEAPSECPAQPKCTYENVTGGLWRGAGW
Sbjct: 241 KFVLGPTPARRHMVKCQGLCPSLHDPPHHNNNNEAPSECPAQPKCTYENVTGGLWRGAGW 300
Query: 301 RLSPEEPGWNGLAHRRAALLHYENLPPLPPVWESQAQQLGGEAGDDGDSRDGLTPSSNGF 360
RLSPEEPGWNGLAHRRAALLHYENLPPLPPVWESQAQQLGGEAGDDGDSRDGLTPSSNGF
Sbjct: 301 RLSPEEPGWNGLAHRRAALLHYENLPPLPPVWESQAQQLGGEAGDDGDSRDGLTPSSNGF 360
Query: 361 PDGEEDETPLQKPTSTRAAIRSHGSFPVPLTRRRGSPRVFNFDFRRPGPEPPRQLNYIQV 420
PDGEEDETPLQKPTSTRAAIRSHGSFPVPLTRRRGSPRVFNFDFRRPGPEPPRQLNYIQV
Sbjct: 361 PDGEEDETPLQKPTSTRAAIRSHGSFPVPLTRRRGSPRVFNFDFRRPGPEPPRQLNYIQV 420
Query: 421 ELKGWGGDRPKGPQNPSSPQAPMPTTHPARSSDSYAVIDLKKTVAMSNLQRALPRDDGTA 480
ELKGWGGDRPKGPQNPSSPQAPMPTTHPARSSDSYAVIDLKKTVAMSNLQRALPRDDGTA
Sbjct: 421 ELKGWGGDRPKGPQNPSSPQAPMPTTHPARSSDSYAVIDLKKTVAMSNLQRALPRDDGTA 480
Query: 481 RKTRHNSTDLPL 492
RKTRHNSTDLPL
Sbjct: 481 RKTRHNSTDLPL 492
>gi|110347414 fibroblast growth factor receptor substrate 2 [Homo
sapiens]
Length = 508
Score = 441 bits (1133), Expect = e-124
Identities = 249/522 (47%), Positives = 327/522 (62%), Gaps = 44/522 (8%)
Query: 1 MGSCCSCLNRDSVPDNHPTKFKVTNVDDEGVELGSGVMELTQSELVLHLHRREAVRWPYL 60
MGSCCSC ++D+VPDNH KFKV NVDD+G ELGSG+MELT +EL+L+ +R++V+W YL
Sbjct: 1 MGSCCSCPDKDTVPDNHRNKFKVINVDDDGNELGSGIMELTDTELILYTRKRDSVKWHYL 60
Query: 61 CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLMQCNSINVMEEPVIIT 120
CLRRYGYDSNLFSFESGRRCQTGQGIFAFKC+RAEE+FN+LQ++MQ NSINV+EEPV +
Sbjct: 61 CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIMQNNSINVVEEPV-VE 119
Query: 121 RNSHPAELDLPRAPQPPNALGYTVSSFSNGCP-----GEGPRFSAPRRLSTSSLRHPSLG 175
RN+H EL++PR P+ P G+ + NG P G+ + R S S R PS+G
Sbjct: 120 RNNHQTELEVPRTPRTPTTPGFAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVG 179
Query: 176 EESTHALIAPDEQSHTYVNTPASEDDHRRGRHCLQPL------PEGQAPFLPQARGPDQR 229
EESTH L+ +EQ HTYVNT +++ + PL E P + + R
Sbjct: 180 EESTHPLLVAEEQVHTYVNTTGVQEERKNRTSVHVPLEARVSNAESSTP-KEEPSSIEDR 238
Query: 230 DPQVFLQPGQVKFVLGPTPARRHMVKCQGLCPSLHDPPHHN--NNNEAPS--------EC 279
DPQ+ L+P VKFVLGPTP ++ +++ + L D + NN E + +
Sbjct: 239 DPQILLEPEGVKFVLGPTPVQKQLMEKEKLEQLGRDQVSGSGANNTEWDTGYDSDERRDA 298
Query: 280 PAQPKCTYENVTG-------GLWRGAGWRLSPEE-PGWNGLAHRRAALLHYENLPPLPPV 331
P+ K YEN+ G G+ RG S + N A RR ALL+YENLP LPPV
Sbjct: 299 PSVNKLVYENINGLSIPSASGVRRGRLTSTSTSDTQNINNSAQRRTALLNYENLPSLPPV 358
Query: 332 WESQAQQLGGEAGDDGDSRDGLTPSSNGFPDGEEDETPLQKPTSTRAAIRSHGSFPVPLT 391
WE++ + D+ D+ TPS NG+ + + P+ +T + + +
Sbjct: 359 WEARKL-----SRDEDDNLGPKTPSLNGYHNNLD---PMHNYVNTENVTVPASAHKIEYS 410
Query: 392 RRRG-SPRVFNFDFRRPGPEPPRQLNYIQVELKGWGGDRPKGPQNPSSPQAPMPTTHPAR 450
RRR +P VFNFD RRP E RQLNYIQV+L+ GG PQ P +P P+P T P R
Sbjct: 411 RRRDCTPTVFNFDIRRPSLE-HRQLNYIQVDLE--GGSDSDNPQTPKTPTTPLPQT-PTR 466
Query: 451 SSDSYAVIDLKKTVAMSNLQRALPRDDGTARKTRHNSTDLPL 492
++ YAVID+++T AMSNLQ+ALPRDDGT+RKTRHNSTDLP+
Sbjct: 467 RTELYAVIDIERTAAMSNLQKALPRDDGTSRKTRHNSTDLPM 508
>gi|110347408 fibroblast growth factor receptor substrate 2 [Homo
sapiens]
Length = 508
Score = 441 bits (1133), Expect = e-124
Identities = 249/522 (47%), Positives = 327/522 (62%), Gaps = 44/522 (8%)
Query: 1 MGSCCSCLNRDSVPDNHPTKFKVTNVDDEGVELGSGVMELTQSELVLHLHRREAVRWPYL 60
MGSCCSC ++D+VPDNH KFKV NVDD+G ELGSG+MELT +EL+L+ +R++V+W YL
Sbjct: 1 MGSCCSCPDKDTVPDNHRNKFKVINVDDDGNELGSGIMELTDTELILYTRKRDSVKWHYL 60
Query: 61 CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLMQCNSINVMEEPVIIT 120
CLRRYGYDSNLFSFESGRRCQTGQGIFAFKC+RAEE+FN+LQ++MQ NSINV+EEPV +
Sbjct: 61 CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIMQNNSINVVEEPV-VE 119
Query: 121 RNSHPAELDLPRAPQPPNALGYTVSSFSNGCP-----GEGPRFSAPRRLSTSSLRHPSLG 175
RN+H EL++PR P+ P G+ + NG P G+ + R S S R PS+G
Sbjct: 120 RNNHQTELEVPRTPRTPTTPGFAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVG 179
Query: 176 EESTHALIAPDEQSHTYVNTPASEDDHRRGRHCLQPL------PEGQAPFLPQARGPDQR 229
EESTH L+ +EQ HTYVNT +++ + PL E P + + R
Sbjct: 180 EESTHPLLVAEEQVHTYVNTTGVQEERKNRTSVHVPLEARVSNAESSTP-KEEPSSIEDR 238
Query: 230 DPQVFLQPGQVKFVLGPTPARRHMVKCQGLCPSLHDPPHHN--NNNEAPS--------EC 279
DPQ+ L+P VKFVLGPTP ++ +++ + L D + NN E + +
Sbjct: 239 DPQILLEPEGVKFVLGPTPVQKQLMEKEKLEQLGRDQVSGSGANNTEWDTGYDSDERRDA 298
Query: 280 PAQPKCTYENVTG-------GLWRGAGWRLSPEE-PGWNGLAHRRAALLHYENLPPLPPV 331
P+ K YEN+ G G+ RG S + N A RR ALL+YENLP LPPV
Sbjct: 299 PSVNKLVYENINGLSIPSASGVRRGRLTSTSTSDTQNINNSAQRRTALLNYENLPSLPPV 358
Query: 332 WESQAQQLGGEAGDDGDSRDGLTPSSNGFPDGEEDETPLQKPTSTRAAIRSHGSFPVPLT 391
WE++ + D+ D+ TPS NG+ + + P+ +T + + +
Sbjct: 359 WEARKL-----SRDEDDNLGPKTPSLNGYHNNLD---PMHNYVNTENVTVPASAHKIEYS 410
Query: 392 RRRG-SPRVFNFDFRRPGPEPPRQLNYIQVELKGWGGDRPKGPQNPSSPQAPMPTTHPAR 450
RRR +P VFNFD RRP E RQLNYIQV+L+ GG PQ P +P P+P T P R
Sbjct: 411 RRRDCTPTVFNFDIRRPSLE-HRQLNYIQVDLE--GGSDSDNPQTPKTPTTPLPQT-PTR 466
Query: 451 SSDSYAVIDLKKTVAMSNLQRALPRDDGTARKTRHNSTDLPL 492
++ YAVID+++T AMSNLQ+ALPRDDGT+RKTRHNSTDLP+
Sbjct: 467 RTELYAVIDIERTAAMSNLQKALPRDDGTSRKTRHNSTDLPM 508
>gi|4503357 docking protein 1 [Homo sapiens]
Length = 481
Score = 61.6 bits (148), Expect = 2e-09
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 57 WPYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLM--QCNSINVME 114
WPY LRRYG D +FSFE+GRRC +G G F F+ ++ +IF ++ + Q +
Sbjct: 201 WPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGNDIFQAVETAIHRQKAQGKAGQ 260
Query: 115 EPVIITRNSHPAELDLPRAPQPP 137
++ +SH E+ + P PP
Sbjct: 261 GHDVLRADSHEGEVAEGKLPSPP 283
>gi|47575849 docking protein 6 [Homo sapiens]
Length = 331
Score = 59.7 bits (143), Expect = 6e-09
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 34 GSGVMELTQSELVL---HLHRREAVRWPYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFK 90
G M++T + L H + + V WP LRRYG DS F+FESGR C TG+G+F F+
Sbjct: 153 GECTMQITHENIYLWDIHNAKVKLVMWPLSSLRRYGRDSTWFTFESGRMCDTGEGLFTFQ 212
Query: 91 CSRAEEIF 98
E I+
Sbjct: 213 TREGEMIY 220
>gi|221554537 docking protein 3 isoform 1 [Homo sapiens]
Length = 496
Score = 58.9 bits (141), Expect = 1e-08
Identities = 63/232 (27%), Positives = 84/232 (36%), Gaps = 68/232 (29%)
Query: 57 WPYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLMQCNSINVMEEP 116
WPY LR++G D +FSFE+GRRC +G+G+FAF A ++ C ++
Sbjct: 259 WPYHFLRKFGSDKGVFSFEAGRRCHSGEGLFAFSTPCAPDL---------CRAV----AG 305
Query: 117 VIITRNSHPAELDLPRAPQPPNALGYTVSSFSNGCPGEGPRFSAPRRLSTSSLRHPSLGE 176
I + EL PQP CP PR S SL P
Sbjct: 306 AIARQRERLPEL---TRPQP--------------CP-------LPRATSLPSLDTPGELR 341
Query: 177 ESTHALIAPDEQSHTYVNTPASEDDHRRGRHCLQPLPEGQAPFLPQARGPDQRDPQVFLQ 236
E P E R H +P P+ LP GP+ D L
Sbjct: 342 EM----------------PPGPEPPTSRKMHLAEPGPQS----LPLLLGPEPNDLASGLY 381
Query: 237 PGQVKFVLGPTPARRHMVKCQGLC-----PSLH---DPPHHNNNNEAPSECP 280
K GP P H+ + LC P+LH PH + +P+ P
Sbjct: 382 ASVCKRASGP-PGNEHLY--ENLCVLEASPTLHGGEPEPHEGPGSRSPTTSP 430
>gi|41406050 docking protein 2 [Homo sapiens]
Length = 412
Score = 58.2 bits (139), Expect = 2e-08
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 57 WPYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLMQCNSINVMEEP 116
WPY LRR+G D FSFE+GRRC +G+G F F+ + EIF L++ +I+ +
Sbjct: 194 WPYRFLRRFGRDKVTFSFEAGRRCVSGEGNFEFETRQGNEIFLALEE-----AISAQKNA 248
Query: 117 VIITRNSHPAEL--DLPRAPQP 136
T PA + LPR P
Sbjct: 249 APATPQPQPATIPASLPRPDSP 270
>gi|20070302 docking protein 4 [Homo sapiens]
Length = 326
Score = 55.8 bits (133), Expect = 9e-08
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 34 GSGVMELTQSELVL---HLHRREAVRWPYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFK 90
G +++T + L H R + V WP LRRYG D+ F+FE+GR C G+G++ F+
Sbjct: 153 GECKLQITHENIYLWDIHNPRVKLVSWPLCSLRRYGRDATRFTFEAGRMCDAGEGLYTFQ 212
Query: 91 CSRAEEIF 98
E+I+
Sbjct: 213 TQEGEQIY 220
>gi|29544726 docking protein 5 [Homo sapiens]
Length = 306
Score = 54.3 bits (129), Expect = 2e-07
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 51 RREAVRWPYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIF 98
R + + WP LRRYG D+ F+FE+GR C+TG+G+F F+ E I+
Sbjct: 173 RVKLISWPLSALRRYGRDTTWFTFEAGRMCETGEGLFIFQTRDGEAIY 220
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 47.0 bits (110), Expect = 4e-05
Identities = 99/409 (24%), Positives = 140/409 (34%), Gaps = 63/409 (15%)
Query: 124 HPAELDLPRAPQPPNALGYTVSSFSNGCPGEGPRFSAPRRLSTS-SLRHPSLGEESTHAL 182
H A+ R P G + S G + + AP + S SL P +
Sbjct: 866 HRAQPSYERPSFLPPGPGLMLRQKSIGAAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPT 925
Query: 183 IAPDEQSHTYVNTPASEDDHRRGRHCLQPLPEGQAPFLPQARGP-DQRDPQVFLQPGQVK 241
+P E ++ P+S GR L P P G PF P + GP P F P
Sbjct: 926 TSPPEPPYSTPPVPSSS-----GR--LTPSPRG-GPFNPGSGGPLPASSPASFDGPSPPD 977
Query: 242 FVLGPTPARRHMVKCQGLCPSLHDPPHHNNNNEAPSE---CPAQPKCTYENVTGGL---- 294
+G + + L P+ H PPHH++++ P + A P E TGG
Sbjct: 978 TRVGSR--EKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDP 1035
Query: 295 --------------WRGAGWRLSPEEP--------GWNGLAHRRAALLHYENLPPLPPVW 332
WRG G +P P G G + + AL +++ LPP
Sbjct: 1036 PPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPALRYFQ----LPPRA 1091
Query: 333 ESQAQQLGGEAGDDGDSR-------DGLTPSSNGFPDGEEDETPLQ-KPTSTRAAIRSHG 384
S A + +G +G G P +P +P AA
Sbjct: 1092 ASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASPQPPPAVAAPSEKN 1151
Query: 385 SFPVPLTRRRGSPRVFNFDFRRPG----PEPPRQLNYIQVELKGWGGDRPKGPQNPSSPQ 440
S P+P T +P + G EPP Q + G GG P SP
Sbjct: 1152 SIPIP-TIIIKAPSTSSSGRSSQGSSTEAEPPTQ---PEPTGGGGGGGSSPSPAPAMSPV 1207
Query: 441 APMPTTHPARSSDS-YAVIDLKKTVAMSNLQRALPRDDGTARKTRHNST 488
P P+ P +S S A +D + L A R+ G + R ST
Sbjct: 1208 PPSPSPVPTPASPSGPATLDFTSQFGAA-LVGAARREGGWQNEARRRST 1255
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 40.4 bits (93), Expect = 0.004
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 326 PPLPPVWESQAQQLGGEAGDDGDSRDGLTPSSNGFPDGEEDETPLQKPTSTRAAIRSHGS 385
PPL P +A++ AG +G S TPS+ G +++P P ST +++
Sbjct: 472 PPLTP--SQRAEREAARAGPEGTSPPTPTPSTA--TGGPPEDSPTVAPKST-TFLKNIRQ 526
Query: 386 FPVPLTRRRGSPRVFNFDFRRPGPEPPRQLNY-IQVELKGWGGDRPKGPQNP----SSPQ 440
F +P+ R S RV R +PP+ + L+ P PQ P S P+
Sbjct: 527 FIMPVVSARSS-RVIKTPRRFMDEDPPKPPKVEVSPVLRPPITTSPPVPQEPAPVPSPPR 585
Query: 441 APMPTTHPARSSDSYAVIDLKKTVAMSNLQRALP 474
AP P + P + I + T ++L R LP
Sbjct: 586 APTPPSTPVPLPEKRRSILREPTFRWTSLTRELP 619
>gi|111185957 downstream of tyrosine kinase 7 [Homo sapiens]
Length = 504
Score = 39.7 bits (91), Expect = 0.006
Identities = 64/239 (26%), Positives = 91/239 (38%), Gaps = 36/239 (15%)
Query: 20 KFKVTNVDDEGVELGSGVMELTQSELVLHLHRREAV--RWPYLCLRRYGYDSNLFSFESG 77
+F VT +E G + L LVL AV +W LRRYG + F FE G
Sbjct: 113 RFHVTVAPGTKLESGPATLHLCNDVLVLARDIPPAVTGQWKLSDLRRYGAVPSGFIFEGG 172
Query: 78 RRCQTGQGIFAFKCSRAEEIFNLLQDLMQCNSINVMEEPV----IITRNSHP----AELD 129
RC G+F + E+I L +++ I+ + P ++ S P E
Sbjct: 173 TRCGYWAGVFFLSSAEGEQISFLFDCIVR--GISPTKGPFGLRPVLPDPSPPGPSTVEER 230
Query: 130 LPRAPQPPNALGYTVSSFSN-GCPGEGPRFSAPRRLSTSSLRHPSLGEESTHALIAPDEQ 188
+ + L +S S+ G PG G R LS+SS L ++ L A EQ
Sbjct: 231 VAQEALETLQLEKRLSLLSHAGRPGSG---GDDRSLSSSSSEASHLDVSASSRLTAWPEQ 287
Query: 189 SHTYVNTPASEDDHRRGRHCLQPLPEGQAPFLPQARGP----DQRDPQVFLQPGQVKFV 243
S + +T EG P QA G R P L+P Q++ V
Sbjct: 288 SSSSASTS----------------QEGPRPAAAQAAGEAMVGASRPPPKPLRPRQLQEV 330
>gi|149944516 tet oncogene family member 3 [Homo sapiens]
Length = 1660
Score = 37.7 bits (86), Expect = 0.024
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 27/129 (20%)
Query: 331 VWESQAQQLGGEAGDDGDSRDGLTPSSNGFPDGEEDETPLQKPTSTRAAIRSHGSFPVPL 390
++E+ +++ EAG++ G P G G ED LQ T A+ HG
Sbjct: 85 LYETFNREMSREAGNNSR---GPRPGPEGCSAGSEDLDTLQ----TALALARHGM----- 132
Query: 391 TRRRGSPRVFNFDFRRPGPEPPRQLNYIQVELKG----WGGDRPK--GPQNPSSPQAPMP 444
P N D GPE P L +++ ++K G +RP+ GP P P P
Sbjct: 133 -----KPPNCNCD----GPECPDYLEWLEGKIKSVVMEGGEERPRLPGPLPPGEAGLPAP 183
Query: 445 TTHPARSSD 453
+T P SS+
Sbjct: 184 STRPLLSSE 192
>gi|56117844 synovial sarcoma translocation, chromosome 18 isoform 2
[Homo sapiens]
Length = 387
Score = 36.6 bits (83), Expect = 0.053
Identities = 49/208 (23%), Positives = 77/208 (37%), Gaps = 25/208 (12%)
Query: 248 PARRHMVKCQGLCPSLHDPPHHNNNNEAPSECPA---QPKCTYENVTGGLWRGAGWRLSP 304
P + M QG + P N + P++ P QP N+ +G G
Sbjct: 174 PVQNQMTMSQGQPMGNYGP--RPNMSMQPNQGPMMHQQPPSQQYNMP----QGGGQHYQG 227
Query: 305 EEP--GWNGLAHRRAALLHYENLPPLPPVWESQAQQLGGEAGDDGD--SRDGLTP----S 356
++P G G ++ ++ +PP P + QQ G+ GD S G P +
Sbjct: 228 QQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMN 287
Query: 357 SNGFPDGE----EDETPLQKPTSTRAAIRSHGSFPVPLTRRRGSPRVFNFDFRRPGPEPP 412
+PDG + + Q P + +P G + + PGP+ P
Sbjct: 288 QQYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQ-QGYPGQQQGYGPSQGGPGPQYP 346
Query: 413 RQLNYIQVELKGWGGDRPKGPQNPSSPQ 440
NY Q + + +GG RP P P PQ
Sbjct: 347 ---NYPQGQGQQYGGYRPTQPGPPQPPQ 371
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 36.6 bits (83), Expect = 0.053
Identities = 38/127 (29%), Positives = 51/127 (40%), Gaps = 11/127 (8%)
Query: 212 LPEGQAPFLPQARGPDQRDPQVFLQPGQVKFVLGPTPARRHMVKCQGLCPSLHDP----- 266
LP G A L A+ P + P PG FV P+P R + G PSL P
Sbjct: 2498 LPAGPAGEL-HAKVPSGQPPNFVRSPGTGAFVGTPSPMRFTFPQAVGE-PSLKPPVPQPG 2555
Query: 267 ---PHHNNNNEAPSECPAQPKCTYENVTGGLWRGAGWRLSPEEPGWNGLAHRRAALLHYE 323
PH N++ P +P+ T V G + +G L P G G ++ + L
Sbjct: 2556 LPPPHGINSHFGPGPTLGKPQSTNYTVATGNFHPSGSPLGPSS-GSTGESYGLSPLRPPS 2614
Query: 324 NLPPLPP 330
LPP P
Sbjct: 2615 VLPPPAP 2621
Score = 33.1 bits (74), Expect = 0.59
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 407 PGPEPPRQLNYI----QVELKGWGGDRPKGPQNPSSPQAPMPTTHP 448
P PEPP Q +Y ++++ P+ P P SP AP P + P
Sbjct: 4884 PAPEPPTQHSYTYNVSNLDVRQLSAPPPEEPSPPPSPLAPSPASPP 4929
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 35.4 bits (80), Expect = 0.12
Identities = 44/168 (26%), Positives = 56/168 (33%), Gaps = 9/168 (5%)
Query: 304 PEEPGWNGLAHRRAAL-LHYENLPPLPPVWESQAQQLGGEAGDDGDSRDGLTPSSNGFPD 362
P P NGL L L P +P + GG G G P G PD
Sbjct: 174 PFSPPANGLLSPHDVLHLKPSQAPTVPSSLGFERLAGGGVLGPAGLGPAQTPPYRPGPPD 233
Query: 363 GEEDETPLQKPTSTRAAIRSHGSFPVPLTRRRGSPRVFNFDFRRPGPEPP-RQLNYIQVE 421
P PT S + + SP+++NF PGP PP R L
Sbjct: 234 --PPPPPRHLPTQFNLLASSSAA---AAAAEQSSPQLYNFSGAAPGPPPPERALPRQDTV 288
Query: 422 LKGWGGDRPKGPQNPSSPQAPMPTTHPARSSDSYAVIDLKKTVAMSNL 469
+K + RP Q P P H SY + + +A S L
Sbjct: 289 IKHY--QRPASAQPPPPPPPAHALQHYLSCGGSYPSMGHRANLACSPL 334
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 35.0 bits (79), Expect = 0.16
Identities = 55/210 (26%), Positives = 81/210 (38%), Gaps = 35/210 (16%)
Query: 131 PRAPQPPNALGYTVSSFSNGCPGEGP------RFSAPRRLSTSSLRHPSLGEESTHALIA 184
P+ P PP+ G + S G G GP R + P R S P ++ +
Sbjct: 1118 PQRPPPPS--GRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISA--PQSHARASAGRLT 1173
Query: 185 PDEQSHTYVNTPASEDDHRRGRHCLQPLPEGQAPFLPQARGPDQRDPQVFLQPGQVKFVL 244
P+ QS T + S LPE P PQA P PQ L P +
Sbjct: 1174 PESQSKTSETSKGSTF-----------LPE---PLKPQAAFP----PQSSLPPPAQRLQE 1215
Query: 245 GPTPARRHMVKCQGLCPSLHDPPH----HNNNNEAPSECPAQPKCTYENVTGGLWRGAGW 300
P M + G P+L PP +++ PSE +QP+ ++ G R +
Sbjct: 1216 PLVPVAAPMPQ-SGPQPNLETPPQPPPRSRSSHSLPSEASSQPQVKTNGISDGK-RESPL 1273
Query: 301 RLSP-EEPGWNGLAHRRAALLHYENLPPLP 329
++ P E+ +N LA +A L + P P
Sbjct: 1274 KIDPFEDLSFNLLAVSKAQLSVQTSPVPTP 1303
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 34.7 bits (78), Expect = 0.20
Identities = 25/94 (26%), Positives = 34/94 (36%), Gaps = 22/94 (23%)
Query: 361 PDGEEDETPLQKPTSTRAAIRSHGSFPVPLTRRRGSPRVFNFDFRRPGPEPPRQLNYIQV 420
P G++ +P P + G+ P G P+ GP P
Sbjct: 143 PQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ---------GPPPQ-------- 185
Query: 421 ELKGWGGDRPKGPQNPSSPQAPMPTTHPARSSDS 454
GG +P+GP P PQ P P +RSS S
Sbjct: 186 -----GGKKPQGPPPPGKPQGPPPQGDKSRSSQS 214
Score = 33.9 bits (76), Expect = 0.35
Identities = 25/94 (26%), Positives = 34/94 (36%), Gaps = 22/94 (23%)
Query: 361 PDGEEDETPLQKPTSTRAAIRSHGSFPVPLTRRRGSPRVFNFDFRRPGPEPPRQLNYIQV 420
P G++ +P P + G+ P G P+ GP P
Sbjct: 82 PQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ---------GPPPQ-------- 124
Query: 421 ELKGWGGDRPKGPQNPSSPQAPMPTTHPARSSDS 454
GG+RP+GP P PQ P P +RS S
Sbjct: 125 -----GGNRPQGPPPPGKPQGPPPQGDKSRSPRS 153
Score = 31.6 bits (70), Expect = 1.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 426 GGDRPKGPQNPSSPQAPMPTTHPARSSDS 454
GG++P+GP P PQ P P +RS S
Sbjct: 64 GGNKPQGPPPPGKPQGPPPQGDKSRSPRS 92
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 33.9 bits (76), Expect = 0.35
Identities = 63/270 (23%), Positives = 95/270 (35%), Gaps = 67/270 (24%)
Query: 216 QAPFLPQARGPDQRDPQVFLQPGQVKFVLGPTPARRHMVKCQGLCPSLHDP--------- 266
Q P A+ P QRD P + +V+ + + PSL P
Sbjct: 263 QTPQTDHAKLPLQRDAS------------RPQTKQADIVRGESVKPSLPSPSKPPIQQPT 310
Query: 267 --------PHHNNNNEAPSECPAQPKCTYENVTGGLWRGAGWRLSPEEPGWNGLAHRRAA 318
P H + P++ PAQP +T L + G P +P
Sbjct: 311 PGKPPAQQPGHEKSQPGPAKPPAQP----SGLTKPLAQQPGTVKPPVQPPGT-------- 358
Query: 319 LLHYENLPPLPPVWESQ--AQQLGGEAGDDGDSRDGLTPSSNGFPDGEEDETPLQKPTST 376
PP P+ ++ AQQ G E S + P + P G +TP Q+P
Sbjct: 359 -----TKPPAQPLGPAKPPAQQTGSEK----PSSEQPGPKALAQPPG-VGKTPAQQPGPA 408
Query: 377 RAAIRSHGSFPVPLTRRRG------SPRVFNFDFRRPGPE--PPRQLNYIQVELKGWGGD 428
+ + G+ P PL ++ G +P ++PGP P +Q + + G
Sbjct: 409 KPPTQQVGT-PKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPT 467
Query: 429 RP----KGPQNPSSPQAPMPTTHPARSSDS 454
+P GP P PQ P P P + S
Sbjct: 468 KPPSQLPGPAKP-PPQQPGPAKPPPQQPGS 496
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 33.9 bits (76), Expect = 0.35
Identities = 63/270 (23%), Positives = 95/270 (35%), Gaps = 67/270 (24%)
Query: 216 QAPFLPQARGPDQRDPQVFLQPGQVKFVLGPTPARRHMVKCQGLCPSLHDP--------- 266
Q P A+ P QRD P + +V+ + + PSL P
Sbjct: 263 QTPQTDHAKLPLQRDAS------------RPQTKQADIVRGESVKPSLPSPSKPPIQQPT 310
Query: 267 --------PHHNNNNEAPSECPAQPKCTYENVTGGLWRGAGWRLSPEEPGWNGLAHRRAA 318
P H + P++ PAQP +T L + G P +P
Sbjct: 311 PGKPPAQQPGHEKSQPGPAKPPAQP----SGLTKPLAQQPGTVKPPVQPPGT-------- 358
Query: 319 LLHYENLPPLPPVWESQ--AQQLGGEAGDDGDSRDGLTPSSNGFPDGEEDETPLQKPTST 376
PP P+ ++ AQQ G E S + P + P G +TP Q+P
Sbjct: 359 -----TKPPAQPLGPAKPPAQQTGSEK----PSSEQPGPKALAQPPG-VGKTPAQQPGPA 408
Query: 377 RAAIRSHGSFPVPLTRRRG------SPRVFNFDFRRPGPE--PPRQLNYIQVELKGWGGD 428
+ + G+ P PL ++ G +P ++PGP P +Q + + G
Sbjct: 409 KPPTQQVGT-PKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPT 467
Query: 429 RP----KGPQNPSSPQAPMPTTHPARSSDS 454
+P GP P PQ P P P + S
Sbjct: 468 KPPSQLPGPAKP-PPQQPGPAKPPPQQPGS 496
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 33.5 bits (75), Expect = 0.45
Identities = 55/208 (26%), Positives = 70/208 (33%), Gaps = 39/208 (18%)
Query: 246 PTPARRHMVKCQGLCPSLHDPPHHNNNNEAPSECPAQPKCTYENVTGGLWRGAGWRLSPE 305
P P R + P PP + + S P +P +G RL P
Sbjct: 73 PHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPS----------QHQSGSRLRPA 122
Query: 306 EPGWN-GLAHRRAALLHYENLPPLPPVWESQAQQLGGEAGDDGDSRDGLTPSSNGFPDGE 364
PG G + RA+ P P ++ A+ G A G P S G +
Sbjct: 123 APGPRPGCSSARAS--------PAPAAPQAAARTAPGRAASGGSG-----PGSRGQGSDQ 169
Query: 365 EDETPLQKPTSTRAAIRSHGSFPVPLTRRR--GSPRVFNFDFRRPG-PEPPRQLNYIQVE 421
P +RA G P PLT RR +PR FRRPG P R +
Sbjct: 170 VGARP------SRA-----GGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGAR 218
Query: 422 LKG-WGGDRPKGPQNPSSPQAPMPTTHP 448
G WG G SSP A + P
Sbjct: 219 SCGTWGSGGGPGTAAASSPSADFSSDSP 246
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 33.5 bits (75), Expect = 0.45
Identities = 55/208 (26%), Positives = 70/208 (33%), Gaps = 39/208 (18%)
Query: 246 PTPARRHMVKCQGLCPSLHDPPHHNNNNEAPSECPAQPKCTYENVTGGLWRGAGWRLSPE 305
P P R + P PP + + S P +P +G RL P
Sbjct: 73 PHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPS----------QHQSGSRLRPA 122
Query: 306 EPGWN-GLAHRRAALLHYENLPPLPPVWESQAQQLGGEAGDDGDSRDGLTPSSNGFPDGE 364
PG G + RA+ P P ++ A+ G A G P S G +
Sbjct: 123 APGPRPGCSSARAS--------PAPAAPQAAARTAPGRAASGGSG-----PGSRGQGSDQ 169
Query: 365 EDETPLQKPTSTRAAIRSHGSFPVPLTRRR--GSPRVFNFDFRRPG-PEPPRQLNYIQVE 421
P +RA G P PLT RR +PR FRRPG P R +
Sbjct: 170 VGARP------SRA-----GGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGAR 218
Query: 422 LKG-WGGDRPKGPQNPSSPQAPMPTTHP 448
G WG G SSP A + P
Sbjct: 219 SCGTWGSGGGPGTAAASSPSADFSSDSP 246
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 33.5 bits (75), Expect = 0.45
Identities = 55/208 (26%), Positives = 70/208 (33%), Gaps = 39/208 (18%)
Query: 246 PTPARRHMVKCQGLCPSLHDPPHHNNNNEAPSECPAQPKCTYENVTGGLWRGAGWRLSPE 305
P P R + P PP + + S P +P +G RL P
Sbjct: 73 PHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPS----------QHQSGSRLRPA 122
Query: 306 EPGWN-GLAHRRAALLHYENLPPLPPVWESQAQQLGGEAGDDGDSRDGLTPSSNGFPDGE 364
PG G + RA+ P P ++ A+ G A G P S G +
Sbjct: 123 APGPRPGCSSARAS--------PAPAAPQAAARTAPGRAASGGSG-----PGSRGQGSDQ 169
Query: 365 EDETPLQKPTSTRAAIRSHGSFPVPLTRRR--GSPRVFNFDFRRPG-PEPPRQLNYIQVE 421
P +RA G P PLT RR +PR FRRPG P R +
Sbjct: 170 VGARP------SRA-----GGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGAR 218
Query: 422 LKG-WGGDRPKGPQNPSSPQAPMPTTHP 448
G WG G SSP A + P
Sbjct: 219 SCGTWGSGGGPGTAAASSPSADFSSDSP 246
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 33.1 bits (74), Expect = 0.59
Identities = 87/345 (25%), Positives = 114/345 (33%), Gaps = 58/345 (16%)
Query: 120 TRNSHPAELDLPRAPQPPNALGYTVSSFSNGCPGEGPRFSAPRRLSTSSLRHPSLGEEST 179
TR H L++ +AP ++L S S G P + PR S P+L E S+
Sbjct: 2210 TRTRHDEYLEVTKAPSLDSSLPQLPSPSSPGAP---LLSNLPRPAS------PALSEGSS 2260
Query: 180 HALIAPDEQSHTYVNTPASEDDHRRGRHCLQPLPEGQAPFLPQARGPDQRDPQVFLQPGQ 239
P S +P+ E + L P E P A P P
Sbjct: 2261 SEATTPVISSVAERFSPSLEAAEQESGE-LDPGME------PAAHSLWDLTPLSPAPPAS 2313
Query: 240 VKFVLGPTPARRHMVKCQGLCPSLHDP--PHHNNNNEAPSECPAQPKCTYENVTGGLWRG 297
+ L P P+ L + D P H +EA +E P+ + E+
Sbjct: 2314 LDLALAPAPS---------LPGDMGDGILPCHLECSEAATEKPSPFQVPSEDCAA----N 2360
Query: 298 AGWRLSPEEPGWNGLAHRRAALLHYENLPPLP-PVWESQAQQLGGEAGDDGDSRDGLTPS 356
SP PG A EN P WE A G E D+ L+P
Sbjct: 2361 GPTETSPNPPG--------PAPAKAENEEAAACPAWERGAWPEGAERSSRPDTL--LSPE 2410
Query: 357 SNGFPDGEEDETPLQKPTSTRAAIRSHGSFPVPLTRRRGSPRVFNFDFRRPGPEPP---- 412
P G P A + + P P R SP N P PP
Sbjct: 2411 QPVCPAGGSGGPPSSASPEVEAGPQGCATEPRP-HRGELSPSFLN------PPLPPSIDD 2463
Query: 413 RQLNYIQVELKGWGGDRPKGPQNPSSPQAPMPTTH---PARSSDS 454
R L+ +V L G GG R G P + P P T P +SDS
Sbjct: 2464 RDLSTEEVRLVGRGGRRRVG--GPGTTGGPCPVTDETPPTSASDS 2506
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 32.7 bits (73), Expect = 0.77
Identities = 54/216 (25%), Positives = 83/216 (38%), Gaps = 35/216 (16%)
Query: 127 ELDLPRAPQPPNA--LGYTVSSFSNGCPGEGP------RFSAPRRLSTSSLRHPSLGEES 178
E++ P++P +G + S G G GP R + P R S P +
Sbjct: 1196 EMEAPKSPGTTRKDNIGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISA--PQSHARA 1253
Query: 179 THALIAPDEQSHTYVNTPASEDDHRRGRHCLQPLPEGQAPFLPQARGPDQRDPQVFLQPG 238
+ + P+ QS T + S LPE P PQA P PQ L P
Sbjct: 1254 SAGRLTPESQSKTSETSKGSTF-----------LPE---PLKPQAAFP----PQSSLPPP 1295
Query: 239 QVKFVLGPTPARRHMVKCQGLCPSLHDPPH----HNNNNEAPSECPAQPKCTYENVTGGL 294
+ P M + G P+L PP +++ PSE +QP+ ++ G
Sbjct: 1296 AQRLQEPLVPVAAPMPQ-SGPQPNLETPPQPPPRSRSSHSLPSEASSQPQVKTNGISDGK 1354
Query: 295 WRGAGWRLSP-EEPGWNGLAHRRAALLHYENLPPLP 329
R + ++ P E+ +N LA +A L + P P
Sbjct: 1355 -RESPLKIDPFEDLSFNLLAVSKAQLSVQTSPVPTP 1389
>gi|222352183 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 2 [Homo sapiens]
Length = 854
Score = 32.7 bits (73), Expect = 0.77
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 306 EPGWNGLAHRRAALLHYENLPP--LPPVWESQAQQLG 340
E GW + +A H E LPP LPP WE + LG
Sbjct: 50 EHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLG 86
>gi|21361472 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 3 [Homo sapiens]
Length = 955
Score = 32.7 bits (73), Expect = 0.77
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 306 EPGWNGLAHRRAALLHYENLPP--LPPVWESQAQQLG 340
E GW + +A H E LPP LPP WE + LG
Sbjct: 171 EHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLG 207
>gi|222352094 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 6 [Homo sapiens]
Length = 834
Score = 32.7 bits (73), Expect = 0.77
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 306 EPGWNGLAHRRAALLHYENLPP--LPPVWESQAQQLG 340
E GW + +A H E LPP LPP WE + LG
Sbjct: 50 EHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLG 86
>gi|222352092 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 6 [Homo sapiens]
Length = 834
Score = 32.7 bits (73), Expect = 0.77
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 306 EPGWNGLAHRRAALLHYENLPP--LPPVWESQAQQLG 340
E GW + +A H E LPP LPP WE + LG
Sbjct: 50 EHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLG 86
>gi|222352090 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 5 [Homo sapiens]
Length = 947
Score = 32.7 bits (73), Expect = 0.77
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 306 EPGWNGLAHRRAALLHYENLPP--LPPVWESQAQQLG 340
E GW + +A H E LPP LPP WE + LG
Sbjct: 163 EHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLG 199
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,261,231
Number of Sequences: 37866
Number of extensions: 1529149
Number of successful extensions: 5918
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 5710
Number of HSP's gapped (non-prelim): 277
length of query: 492
length of database: 18,247,518
effective HSP length: 106
effective length of query: 386
effective length of database: 14,233,722
effective search space: 5494216692
effective search space used: 5494216692
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.