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Search of human proteins with 5729903
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5729903 lectin, galactoside-binding, soluble, 2 [Homo
sapiens]
(132 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5729903 lectin, galactoside-binding, soluble, 2 [Homo sapiens] 275 1e-74
gi|4504981 galectin-1 [Homo sapiens] 117 3e-27
gi|115430223 galectin 3 [Homo sapiens] 68 2e-12
gi|4504985 galectin-7 [Homo sapiens] 62 1e-10
gi|109948279 galectin-7B [Homo sapiens] 62 1e-10
gi|42544193 galectin-8 isoform a [Homo sapiens] 61 2e-10
gi|42544191 galectin-8 isoform b [Homo sapiens] 61 2e-10
gi|42544187 galectin-8 isoform b [Homo sapiens] 61 2e-10
gi|42544185 galectin-8 isoform a [Homo sapiens] 61 2e-10
gi|216547832 lectin, galactoside-binding, soluble, 12 isoform 5 ... 54 3e-08
gi|216547818 lectin, galactoside-binding, soluble, 12 isoform 4 ... 54 3e-08
gi|216547811 lectin, galactoside-binding, soluble, 12 isoform 3 ... 54 3e-08
gi|216547809 lectin, galactoside-binding, soluble, 12 isoform 1 ... 54 3e-08
gi|20127659 lectin, galactoside-binding, soluble, 12 isoform 2 [... 54 3e-08
gi|5453712 galectin-4 [Homo sapiens] 54 4e-08
gi|102469694 galectin-9 isoform short [Homo sapiens] 52 2e-07
gi|6806890 galectin-9 isoform long [Homo sapiens] 52 2e-07
gi|111494237 galectin-9 like [Homo sapiens] 50 7e-07
gi|111494239 galectin 9 like [Homo sapiens] 49 9e-07
gi|20357559 Charcot-Leyden crystal protein [Homo sapiens] 34 0.038
gi|122937434 Rho-guanine nucleotide exchange factor [Homo sapiens] 29 1.2
gi|4826980 nuclear receptor subfamily 1, group H, member 4 [Homo... 28 2.1
gi|53729339 mitochondrial translational initiation factor 2 prec... 28 2.1
gi|53729337 mitochondrial translational initiation factor 2 prec... 28 2.1
gi|115583677 sodium channel, voltage-gated, type I, alpha [Homo ... 27 3.6
gi|6631090 interphotoreceptor matrix proteoglycan 1 [Homo sapiens] 27 6.1
gi|93141214 sodium channel, voltage-gated, type II, alpha isofor... 26 8.0
gi|93141212 sodium channel, voltage-gated, type II, alpha isofor... 26 8.0
gi|93141210 sodium channel, voltage-gated, type II, alpha isofor... 26 8.0
>gi|5729903 lectin, galactoside-binding, soluble, 2 [Homo sapiens]
Length = 132
Score = 275 bits (702), Expect = 1e-74
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 1 MTGELEVKNMDMKPGSTLKITGSIADGTDGFVINLGQGTDKLNLHFNPRFSESTIVCNSL 60
MTGELEVKNMDMKPGSTLKITGSIADGTDGFVINLGQGTDKLNLHFNPRFSESTIVCNSL
Sbjct: 1 MTGELEVKNMDMKPGSTLKITGSIADGTDGFVINLGQGTDKLNLHFNPRFSESTIVCNSL 60
Query: 61 DGSNWGQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVR 120
DGSNWGQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVR
Sbjct: 61 DGSNWGQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVR 120
Query: 121 GGFNMSSFKLKE 132
GGFNMSSFKLKE
Sbjct: 121 GGFNMSSFKLKE 132
>gi|4504981 galectin-1 [Homo sapiens]
Length = 135
Score = 117 bits (292), Expect = 3e-27
Identities = 56/125 (44%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Query: 5 LEVKNMDMKPGSTLKITGSIADGTDGFVINLGQGTDKLNLHFNPRFSE----STIVCNSL 60
L N+++KPG L++ G +A FV+NLG+ ++ L LHFNPRF+ +TIVCNS
Sbjct: 5 LVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSK 64
Query: 61 DGSNWGQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVR 120
DG WG EQRE F PGS + +TF+ VKLPDG+E FPNRL ++Y++
Sbjct: 65 DGGAWGTEQREAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAAD 124
Query: 121 GGFNM 125
G F +
Sbjct: 125 GDFKI 129
>gi|115430223 galectin 3 [Homo sapiens]
Length = 250
Score = 67.8 bits (164), Expect = 2e-12
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 14 PGSTLKITGSIADGTDGFVINLGQGTDKLNLHFNPRFSEST---IVCNSLDGSNWGQEQR 70
P + I G++ + ++ +G D + HFNPRF+E+ IVCN+ +NWG+E+R
Sbjct: 128 PRMLITILGTVKPNANRIALDFQRGND-VAFHFNPRFNENNRRVIVCNTKLDNNWGREER 186
Query: 71 EDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGH-SHLSYLSVRGGFNMSS 127
+ F G K V E D FKV + D H L + +R+ + +S L + G +++S
Sbjct: 187 QSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTS 244
>gi|4504985 galectin-7 [Homo sapiens]
Length = 136
Score = 62.4 bits (150), Expect = 1e-10
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 12 MKPGSTLKITGSIADGTDGFVINL----GQGTDKLNLHFNPRFSESTIVCNSLDGSNWGQ 67
++PG+ L+I G + F +NL QG+D LHFNPR S +V NS + +WG+
Sbjct: 14 IRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAA-LHFNPRLDTSEVVFNSKEQGSWGR 72
Query: 68 EQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRGGFNMSS 127
E+R + F G + + D FK + D F +RL + + + V G + S
Sbjct: 73 EERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDS 132
Query: 128 FKL 130
++
Sbjct: 133 VRI 135
>gi|109948279 galectin-7B [Homo sapiens]
Length = 136
Score = 62.4 bits (150), Expect = 1e-10
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 12 MKPGSTLKITGSIADGTDGFVINL----GQGTDKLNLHFNPRFSESTIVCNSLDGSNWGQ 67
++PG+ L+I G + F +NL QG+D LHFNPR S +V NS + +WG+
Sbjct: 14 IRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAA-LHFNPRLDTSEVVFNSKEQGSWGR 72
Query: 68 EQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRGGFNMSS 127
E+R + F G + + D FK + D F +RL + + + V G + S
Sbjct: 73 EERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDS 132
Query: 128 FKL 130
++
Sbjct: 133 VRI 135
>gi|42544193 galectin-8 isoform a [Homo sapiens]
Length = 359
Score = 61.2 bits (147), Expect = 2e-10
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 12 MKPGSTLKITGSIADGTDGFVINLGQGTDK-----LNLHFNPRFSES-TIVCNSLDGSNW 65
+ PG+ + I G + D F ++L G+ + HFNPRF + IVCN+L W
Sbjct: 27 LDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVCNTLINEKW 86
Query: 66 GQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRGGFNM 125
G+E+ F + + DKF+V + H L + +R+G + L + G N+
Sbjct: 87 GREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIYGKVNI 146
Query: 126 SS 127
S
Sbjct: 147 HS 148
Score = 54.7 bits (130), Expect = 2e-08
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 9 NMDMKPGSTLKITGSIADGTDGFVINLGQGTDK-LNLHFNPRFSESTIVCNSLDGSNWGQ 67
N M PG T+ + G + F ++L G K + LH NPR + V NS +WG+
Sbjct: 234 NTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQESWGE 293
Query: 68 EQRE-DHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGH-SHLSYLSVRGGFNM 125
E+R FSPG + + + +FKV + H L + +R S + L + G ++
Sbjct: 294 EERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHL 353
>gi|42544191 galectin-8 isoform b [Homo sapiens]
Length = 317
Score = 61.2 bits (147), Expect = 2e-10
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 12 MKPGSTLKITGSIADGTDGFVINLGQGTDK-----LNLHFNPRFSES-TIVCNSLDGSNW 65
+ PG+ + I G + D F ++L G+ + HFNPRF + IVCN+L W
Sbjct: 27 LDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVCNTLINEKW 86
Query: 66 GQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRGGFNM 125
G+E+ F + + DKF+V + H L + +R+G + L + G N+
Sbjct: 87 GREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIYGKVNI 146
Query: 126 SS 127
S
Sbjct: 147 HS 148
Score = 54.7 bits (130), Expect = 2e-08
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 9 NMDMKPGSTLKITGSIADGTDGFVINLGQGTDK-LNLHFNPRFSESTIVCNSLDGSNWGQ 67
N M PG T+ + G + F ++L G K + LH NPR + V NS +WG+
Sbjct: 192 NTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQESWGE 251
Query: 68 EQRE-DHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGH-SHLSYLSVRGGFNM 125
E+R FSPG + + + +FKV + H L + +R S + L + G ++
Sbjct: 252 EERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHL 311
>gi|42544187 galectin-8 isoform b [Homo sapiens]
Length = 317
Score = 61.2 bits (147), Expect = 2e-10
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 12 MKPGSTLKITGSIADGTDGFVINLGQGTDK-----LNLHFNPRFSES-TIVCNSLDGSNW 65
+ PG+ + I G + D F ++L G+ + HFNPRF + IVCN+L W
Sbjct: 27 LDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVCNTLINEKW 86
Query: 66 GQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRGGFNM 125
G+E+ F + + DKF+V + H L + +R+G + L + G N+
Sbjct: 87 GREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIYGKVNI 146
Query: 126 SS 127
S
Sbjct: 147 HS 148
Score = 54.7 bits (130), Expect = 2e-08
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 9 NMDMKPGSTLKITGSIADGTDGFVINLGQGTDK-LNLHFNPRFSESTIVCNSLDGSNWGQ 67
N M PG T+ + G + F ++L G K + LH NPR + V NS +WG+
Sbjct: 192 NTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQESWGE 251
Query: 68 EQRE-DHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGH-SHLSYLSVRGGFNM 125
E+R FSPG + + + +FKV + H L + +R S + L + G ++
Sbjct: 252 EERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHL 311
>gi|42544185 galectin-8 isoform a [Homo sapiens]
Length = 359
Score = 61.2 bits (147), Expect = 2e-10
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 12 MKPGSTLKITGSIADGTDGFVINLGQGTDK-----LNLHFNPRFSES-TIVCNSLDGSNW 65
+ PG+ + I G + D F ++L G+ + HFNPRF + IVCN+L W
Sbjct: 27 LDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVCNTLINEKW 86
Query: 66 GQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRGGFNM 125
G+E+ F + + DKF+V + H L + +R+G + L + G N+
Sbjct: 87 GREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIYGKVNI 146
Query: 126 SS 127
S
Sbjct: 147 HS 148
Score = 54.7 bits (130), Expect = 2e-08
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 9 NMDMKPGSTLKITGSIADGTDGFVINLGQGTDK-LNLHFNPRFSESTIVCNSLDGSNWGQ 67
N M PG T+ + G + F ++L G K + LH NPR + V NS +WG+
Sbjct: 234 NTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQESWGE 293
Query: 68 EQRE-DHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGH-SHLSYLSVRGGFNM 125
E+R FSPG + + + +FKV + H L + +R S + L + G ++
Sbjct: 294 EERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHL 353
>gi|216547832 lectin, galactoside-binding, soluble, 12 isoform 5
[Homo sapiens]
Length = 266
Score = 54.3 bits (129), Expect = 3e-08
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 45 HFNPRF--SESTIVCNSLDGSNWGQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHE 102
HFNPRF ++ ++CN+L G W +E R HL GS F +++ KV + H
Sbjct: 34 HFNPRFHTTKPHVICNTLHGGRWQREARWPHLALRRGSSFLILFLFGNEEVKVSVNGQHF 93
Query: 103 LTFPNRLGHSHLSYLSVRG 121
L F RL SH+ L + G
Sbjct: 94 LHFRYRLPLSHVDTLGIFG 112
>gi|216547818 lectin, galactoside-binding, soluble, 12 isoform 4
[Homo sapiens]
Length = 275
Score = 54.3 bits (129), Expect = 3e-08
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 45 HFNPRF--SESTIVCNSLDGSNWGQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHE 102
HFNPRF ++ ++CN+L G W +E R HL GS F +++ KV + H
Sbjct: 34 HFNPRFHTTKPHVICNTLHGGRWQREARWPHLALRRGSSFLILFLFGNEEVKVSVNGQHF 93
Query: 103 LTFPNRLGHSHLSYLSVRG 121
L F RL SH+ L + G
Sbjct: 94 LHFRYRLPLSHVDTLGIFG 112
>gi|216547811 lectin, galactoside-binding, soluble, 12 isoform 3
[Homo sapiens]
Length = 327
Score = 54.3 bits (129), Expect = 3e-08
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 45 HFNPRF--SESTIVCNSLDGSNWGQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHE 102
HFNPRF ++ ++CN+L G W +E R HL GS F +++ KV + H
Sbjct: 95 HFNPRFHTTKPHVICNTLHGGRWQREARWPHLALRRGSSFLILFLFGNEEVKVSVNGQHF 154
Query: 103 LTFPNRLGHSHLSYLSVRG 121
L F RL SH+ L + G
Sbjct: 155 LHFRYRLPLSHVDTLGIFG 173
>gi|216547809 lectin, galactoside-binding, soluble, 12 isoform 1
[Homo sapiens]
Length = 337
Score = 54.3 bits (129), Expect = 3e-08
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 45 HFNPRF--SESTIVCNSLDGSNWGQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHE 102
HFNPRF ++ ++CN+L G W +E R HL GS F +++ KV + H
Sbjct: 96 HFNPRFHTTKPHVICNTLHGGRWQREARWPHLALRRGSSFLILFLFGNEEVKVSVNGQHF 155
Query: 103 LTFPNRLGHSHLSYLSVRG 121
L F RL SH+ L + G
Sbjct: 156 LHFRYRLPLSHVDTLGIFG 174
>gi|20127659 lectin, galactoside-binding, soluble, 12 isoform 2
[Homo sapiens]
Length = 336
Score = 54.3 bits (129), Expect = 3e-08
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 45 HFNPRF--SESTIVCNSLDGSNWGQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHE 102
HFNPRF ++ ++CN+L G W +E R HL GS F +++ KV + H
Sbjct: 95 HFNPRFHTTKPHVICNTLHGGRWQREARWPHLALRRGSSFLILFLFGNEEVKVSVNGQHF 154
Query: 103 LTFPNRLGHSHLSYLSVRG 121
L F RL SH+ L + G
Sbjct: 155 LHFRYRLPLSHVDTLGIFG 173
>gi|5453712 galectin-4 [Homo sapiens]
Length = 323
Score = 53.9 bits (128), Expect = 4e-08
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Query: 17 TLKITGSIADGTDGFVINLGQGTD-KLNLHFNPRFSESTIVCNSLDGSNWGQEQRE-DHL 74
T+ I G + F IN G+ + LH NPR T+V NSL +WG E+++ H
Sbjct: 207 TIIIKGYVPPTGKSFAINFKVGSSGDIALHINPRMGNGTVVRNSLLNGSWGSEEKKITHN 266
Query: 75 CFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRL-GHSHLSYLSVRGGFNMS 126
F PG ++ D+FKV H F +RL + L ++G +S
Sbjct: 267 PFGPGQFFDLSIRCGLDRFKVYANGQHLFDFAHRLSAFQRVDTLEIQGDVTLS 319
Score = 49.3 bits (116), Expect = 9e-07
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Query: 15 GSTLKITGSIADGTDGFVINLGQGTDK---LNLHFNPRFSE-STIVCNSLDGSNWGQEQR 70
G ++ I G ++ F +N G D + HFNPRF +V N+L G WG E+R
Sbjct: 30 GMSVYIQGVASEHMKRFFVNFVVGQDPGSDVAFHFNPRFDGWDKVVFNTLQGGKWGSEER 89
Query: 71 EDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRGGFNMSS 127
+ + F G+ + ++ +KV + + +RL +++L V G + S
Sbjct: 90 KRSMPFKKGAAFELVFIVLAEHYKVVVNGNPFYEYGHRLPLQMVTHLQVDGDLQLQS 146
>gi|102469694 galectin-9 isoform short [Homo sapiens]
Length = 323
Score = 51.6 bits (122), Expect = 2e-07
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 12 MKPGSTLKITGSIADGTDG-FVINLGQGT--DKLNLHFNPRFSEST-IVCNSLDGSNWGQ 67
++ G + + G++ + F +N G + + HFNPRF + +VCN+ +WG
Sbjct: 25 LQDGLQITVNGTVLSSSGTRFAVNFQTGFSGNDIAFHFNPRFEDGGYVVCNTRQNGSWGP 84
Query: 68 EQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRGGFNMS 126
E+R+ H+ F G +S FKV + + + +R+ + +SV G +S
Sbjct: 85 EERKTHMPFQKGMPFDLCFLVQSSDFKVMVNGILFVQYFHRVPFHRVDTISVNGSVQLS 143
Score = 45.8 bits (107), Expect = 1e-05
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 14 PGSTLKITGSIADGTDGFVINLGQGTDKLNLHFNPRFSESTIVCNSLDGSNWGQEQRE-- 71
P ++ ++G++ F INL G + + H NPRF E+ +V N+ ++WG E+R
Sbjct: 205 PSKSILLSGTVLPSAQRFHINLCSG-NHIAFHLNPRFDENAVVRNTQIDNSWGSEERSLP 263
Query: 72 DHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRL 109
+ F G + E+ KV + H + +RL
Sbjct: 264 RKMPFVRGQSFSVWILCEAHCLKVAVDGQHLFEYYHRL 301
>gi|6806890 galectin-9 isoform long [Homo sapiens]
Length = 355
Score = 51.6 bits (122), Expect = 2e-07
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 12 MKPGSTLKITGSIADGTDG-FVINLGQGT--DKLNLHFNPRFSEST-IVCNSLDGSNWGQ 67
++ G + + G++ + F +N G + + HFNPRF + +VCN+ +WG
Sbjct: 25 LQDGLQITVNGTVLSSSGTRFAVNFQTGFSGNDIAFHFNPRFEDGGYVVCNTRQNGSWGP 84
Query: 68 EQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRGGFNMS 126
E+R+ H+ F G +S FKV + + + +R+ + +SV G +S
Sbjct: 85 EERKTHMPFQKGMPFDLCFLVQSSDFKVMVNGILFVQYFHRVPFHRVDTISVNGSVQLS 143
Score = 45.8 bits (107), Expect = 1e-05
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 14 PGSTLKITGSIADGTDGFVINLGQGTDKLNLHFNPRFSESTIVCNSLDGSNWGQEQRE-- 71
P ++ ++G++ F INL G + + H NPRF E+ +V N+ ++WG E+R
Sbjct: 237 PSKSILLSGTVLPSAQRFHINLCSG-NHIAFHLNPRFDENAVVRNTQIDNSWGSEERSLP 295
Query: 72 DHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRL 109
+ F G + E+ KV + H + +RL
Sbjct: 296 RKMPFVRGQSFSVWILCEAHCLKVAVDGQHLFEYYHRL 333
>gi|111494237 galectin-9 like [Homo sapiens]
Length = 355
Score = 49.7 bits (117), Expect = 7e-07
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 12 MKPGSTLKITGSI--ADGTDGFV-INLGQGTDKLNLHFNPRFSEST-IVCNSLDGSNWGQ 67
++ G + + G++ + GT V G + + HFNPRF + +VCN+ WG
Sbjct: 25 LQDGFQITVNGAVLSSSGTRFAVDFQTGFSGNDIAFHFNPRFEDGGYVVCNTRQKGRWGP 84
Query: 68 EQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRGGFNMS 126
E+R+ H+ F G +S FKV + + + +R+ + +SV G +S
Sbjct: 85 EERKMHMPFQKGMPFDLCFLVQSSDFKVMVNGSLFVQYFHRVPFHRVDTISVNGSVQLS 143
Score = 46.2 bits (108), Expect = 7e-06
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 14 PGSTLKITGSIADGTDGFVINLGQGTDKLNLHFNPRFSESTIVCNSLDGSNWGQEQRE-- 71
P ++ ++G++ F INL G+ + H NPRF E+ +V N+ ++WG E+R
Sbjct: 237 PSKSIILSGTVLPSAQRFHINLCSGSH-IAFHMNPRFDENAVVRNTQINNSWGSEERSLP 295
Query: 72 DHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRL 109
+ F G + E+ KV + H + +RL
Sbjct: 296 RKMPFVRGQSFSVWILCEAHCLKVAVDGQHVFEYYHRL 333
>gi|111494239 galectin 9 like [Homo sapiens]
Length = 356
Score = 49.3 bits (116), Expect = 9e-07
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Query: 12 MKPGSTLKITGSI--ADGTDGFV-INLGQGTDKLNLHFNPRFSEST-IVCNSLDGSNWGQ 67
++ G + + G++ GT V G + + HFNPRF + +VCN+ WG
Sbjct: 25 LQDGFQITVNGAVLSCSGTRFAVDFQTGFSGNDIAFHFNPRFEDGGYVVCNTRQKGTWGP 84
Query: 68 EQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRGGFNMS 126
E+R+ H+ F G +S FKV + + + +R+ + +SV G +S
Sbjct: 85 EERKMHMPFQKGMPFDLCFLVQSSDFKVMVNGSLFVQYFHRVPFHRVDTISVNGSVQLS 143
Score = 46.2 bits (108), Expect = 7e-06
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 14 PGSTLKITGSIADGTDGFVINLGQGTDKLNLHFNPRFSESTIVCNSLDGSNWGQEQRE-- 71
P ++ ++G++ F INL G+ + H NPRF E+ +V N+ ++WG E+R
Sbjct: 238 PSKSIILSGTVLPSAQRFHINLCSGSH-IAFHMNPRFDENAVVRNTQINNSWGSEERSLP 296
Query: 72 DHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRL 109
+ F G + E+ KV + H + +RL
Sbjct: 297 RKMPFVRGQSFSVWILCEAHCLKVAVDGQHVFEYYHRL 334
>gi|20357559 Charcot-Leyden crystal protein [Homo sapiens]
Length = 142
Score = 33.9 bits (76), Expect = 0.038
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 45 HFNPRFSESTIVCNSLDGSNWGQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELT 104
HF F +V NS + W Q+ ++ F G E + +++ DK++V + T
Sbjct: 53 HFQVCFGRR-VVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYT 111
Query: 105 FPNRLGHSHLSYLSVRGGFNMSSFKL 130
F +R+ + + V +++ F +
Sbjct: 112 FDHRIKPEAVKMVQVWRDISLTKFNV 137
>gi|122937434 Rho-guanine nucleotide exchange factor [Homo sapiens]
Length = 1651
Score = 28.9 bits (63), Expect = 1.2
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 22/103 (21%)
Query: 2 TGELEVKNMDMKPGSTLKITGSIADGTDGFVINLGQGTDKLNLHFNPRFSESTIVCNSLD 61
T E + M P S+ +++ G GF +K H R S ++LD
Sbjct: 436 TAHTEAQQSFMSPSSSCASNLNLSFGWHGF--------EKEQSHLKKRSSS----LDALD 483
Query: 62 GSNWGQEQRE-DHLCFSPGSEVKFTVTFESDKFKVKLPDGHEL 103
+ G+ E H+C++PGS+ + +P G EL
Sbjct: 484 ADSEGEGHSEPSHICYTPGSQ---------SSSRTGIPSGDEL 517
>gi|4826980 nuclear receptor subfamily 1, group H, member 4 [Homo
sapiens]
Length = 472
Score = 28.1 bits (61), Expect = 2.1
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 71 EDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLS--YLSVRGGFNMSSF 128
ED + GS V+ ++ F KLP GH R+ +S +S Y++ F S
Sbjct: 314 EDQIALLKGSAVEAMFLRSAEIFNKKLPSGHSDLLEERIRNSGISDEYITPMFSFYKSIG 373
Query: 129 KLK 131
+LK
Sbjct: 374 ELK 376
>gi|53729339 mitochondrial translational initiation factor 2
precursor [Homo sapiens]
Length = 727
Score = 28.1 bits (61), Expect = 2.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 86 VTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRG 121
+T F V LP G ++TF + GH+ S + RG
Sbjct: 213 ITQHIGAFLVSLPSGEKITFLDTPGHAAFSAMRARG 248
>gi|53729337 mitochondrial translational initiation factor 2
precursor [Homo sapiens]
Length = 727
Score = 28.1 bits (61), Expect = 2.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 86 VTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRG 121
+T F V LP G ++TF + GH+ S + RG
Sbjct: 213 ITQHIGAFLVSLPSGEKITFLDTPGHAAFSAMRARG 248
>gi|115583677 sodium channel, voltage-gated, type I, alpha [Homo
sapiens]
Length = 1998
Score = 27.3 bits (59), Expect = 3.6
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 66 GQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRG 121
G+E+ ED SE + ++ + +F + +G+ LT+ R H S LS+RG
Sbjct: 512 GEEKDEDEF---QKSESEDSIRRKGFRFSI---EGNRLTYEKRYSSPHQSLLSIRG 561
>gi|6631090 interphotoreceptor matrix proteoglycan 1 [Homo sapiens]
Length = 797
Score = 26.6 bits (57), Expect = 6.1
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 55 IVCNSLDGSNWGQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHL 114
I+ N+L+ + +RE V+ +V+ + KFK +L D + G S L
Sbjct: 209 ILDNTLNDTKMPTTERETEFAVLEEQRVELSVSLVNQKFKAELADSQSPYYQELAGKSQL 268
>gi|93141214 sodium channel, voltage-gated, type II, alpha isoform 2
[Homo sapiens]
Length = 2005
Score = 26.2 bits (56), Expect = 8.0
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 66 GQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRG 121
G+E++ D + SE + ++ + +F + +G LT+ R H S LS+RG
Sbjct: 515 GEEEKNDRV---RKSESEDSIRRKGFRFSL---EGSRLTYEKRFSSPHQSLLSIRG 564
>gi|93141212 sodium channel, voltage-gated, type II, alpha isoform 1
[Homo sapiens]
Length = 2005
Score = 26.2 bits (56), Expect = 8.0
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 66 GQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRG 121
G+E++ D + SE + ++ + +F + +G LT+ R H S LS+RG
Sbjct: 515 GEEEKNDRV---RKSESEDSIRRKGFRFSL---EGSRLTYEKRFSSPHQSLLSIRG 564
>gi|93141210 sodium channel, voltage-gated, type II, alpha isoform 1
[Homo sapiens]
Length = 2005
Score = 26.2 bits (56), Expect = 8.0
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 66 GQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRG 121
G+E++ D + SE + ++ + +F + +G LT+ R H S LS+RG
Sbjct: 515 GEEEKNDRV---RKSESEDSIRRKGFRFSL---EGSRLTYEKRFSSPHQSLLSIRG 564
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,353,607
Number of Sequences: 37866
Number of extensions: 226149
Number of successful extensions: 418
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 372
Number of HSP's gapped (non-prelim): 38
length of query: 132
length of database: 18,247,518
effective HSP length: 91
effective length of query: 41
effective length of database: 14,801,712
effective search space: 606870192
effective search space used: 606870192
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.